BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg482676

Length=1433
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT2G36950.1 | Symbols:  | Heavy metal transport/detoxification ...  1871    0.0  


> AT2G36950.1 | Symbols:  | Heavy metal transport/detoxification 
superfamily protein  | chr2:15515133-15516931 FORWARD LENGTH=1421
Length=1421

 Score = 1871 bits (1013),  Expect = 0.0
 Identities = 1316/1454 (91%), Gaps = 54/1454 (4%)
 Strand=Plus/Plus

Query  1     TTACTCTCGTTCAAACATTTCTTCATCCT-TTAAATACaaaaaataaaaaataaaaaCC-  58
             ||||||||||||||||| |||||| |||| ||||||||||||||| ||||||     || 
Sbjct  1     TTACTCTCGTTCAAACAATTCTTCGTCCTATTAAATACAAAAAAT-AAAAAT-----CCT  54

Query  59    TAGAAAATA-A-CCTTATCTTCAACCAAGAATGGGAGAGGTCCAAGAAGGTGCCAAAGTT  116
             || |||||| | ||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct  55    TA-AAAATATATCCTTATCTTCAACCAAGAATGGGAGAGGTCCAAGAAGGTCCCAAAGTT  113

Query  117   GAACAAGAGAAGAAGCCGGCTGCCACCGTAGTCCCAGTCGAGACTACGGACGGCAAGCCA  176
             |||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct  114   GAACAAGAGAAGAAGCCGGCTGCCACCGTAGTCCCAGTTGAGACTACTGACGGCAAGCCA  173

Query  177   AAGAGCGGCGGAGGAGATTCCGCGGCAGCAGCAG--CC-CC-G--GCCGC------CGCT  224
             ||||||||||||||||||||||||||||||||||  || || |  |||||      | ||
Sbjct  174   AAGAGCGGCGGAGGAGATTCCGCGGCAGCAGCAGCACCACCGGTCGCCGCGGTTGTCTCT  233

Query  225   GCCTTTGTTTACAAAGTTGATCTGCACTGCGAAGGCTGCGCTAAGAAGATTAAGCGAATG  284
             ||||||||||||||||| ||| ||||||| |||||||||||||||||||| |||||||||
Sbjct  234   GCCTTTGTTTACAAAGTGGATATGCACTGTGAAGGCTGCGCTAAGAAGATAAAGCGAATG  293

Query  285   GTGAAGCACTTTGATGGAGTGAAAGATGTGACGGCGGATACAGGTGGTAATAAGCTTATG  344
             || |||||||||||||||||||||||||||||||| ||||| ||||| ||||||||| ||
Sbjct  294   GTTAAGCACTTTGATGGAGTGAAAGATGTGACGGCAGATACTGGTGGAAATAAGCTTTTG  353

Query  345   GTGGTCGGAAAGATTGATCCGGTGCAACTCCAGGAGAAGTTAGAGGAGAAAACTAAGAGA  404
             |||||||||||||||||||| ||| |||||||||||||||| ||||||||||| ||||||
Sbjct  354   GTGGTCGGAAAGATTGATCCAGTGAAACTCCAGGAGAAGTTGGAGGAGAAAACCAAGAGA  413

Query  405   AAGGTGGTACTCACCAATCCACCGCCACCTTCACCGCCAAAGGTAGAGGGACCTGTTGCT  464
             ||||||||  |   |  |    ||| |  | |||||||||||||||||||||||||||||
Sbjct  414   AAGGTGGT--T---C--T----CGCGA-ATCCACCGCCAAAGGTAGAGGGACCTGTTGCT  461

Query  465   GCCGCCGTTGGAGAGAAGAAAGCCGATGGAGGAGATAAGGCGGCGGTTCCTCCTCCTGCT  524
             ||||||||||||||||||||||||||||| |||||||||| ||||| ||||||| || ||
Sbjct  462   GCCGCCGTTGGAGAGAAGAAAGCCGATGGTGGAGATAAGGAGGCGGCTCCTCCTGCTCCT  521

Query  525   GCTCCGGCAGCTCCAAAAGAGAGC-TCCGTGCCTTTAAAGATCAGACTACATTGTGAAGG  583
             |||||||||||||||||||||||| |  |||||||||||||||||||||||||| |||||
Sbjct  522   GCTCCGGCAGCTCCAAAAGAGAGCGT-GGTGCCTTTAAAGATCAGACTACATTGCGAAGG  580

Query  584   ATGTATTCAGAAAATCAAGAAAATAATATTAAAAATCAAAGGGGTCGAAACCGTGGCTAT  643
             |||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||
Sbjct  581   ATGTATTCAGAAAATCAAGAAAATAATATTGAAAATCAAAGGAGTCGAAACAGTGGCTAT  640

Query  644   TGACGGAGCTAAAGACGTGGTGACGGTGAAAGGAACGATAGACGTTAAAGAACTTGTGCC  703
             ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct  641   TGACGGAGCTAAAGACGTGGTGACGGTTAAAGGAACGATAGACGTTAAAGAACTTGTGCC  700

Query  704   TCTCCTCACTAAGAAGCTCAAAAGAACCGTCGAGCCTCTTGTTCCCGCCAAAAAAGATGA  763
             ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  701   TCTACTCACTAAGAAGCTCAAAAGAACCGTCGAGCCTCTTGTTCCCGCCAAAAAAGATGA  760

Query  764   CGGAGCCGCCGAGAAGAAGAAGACGGAAGCCACCGCTCCTGACGCAAAGAAAGAGGCTCC  823
             ||||||||||||||| ||||||||||||||  ||||||||||||||||||||||||||||
Sbjct  761   CGGAGCCGCCGAGAATAAGAAGACGGAAGCTGCCGCTCCTGACGCAAAGAAAGAGGCTCC  820

Query  824   GACCGCCGGAGTTAACGAAGCaaagaaggaaggaaatgacggtggagagaagaagaaaga  883
             | ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||
Sbjct  821   GTCCGCCGGAGTTAACGAAGCAAAGAAGGAAGGAAGTGACGGTGGAGAGAAGAAAAAAGA  880

Query  884   ggccggagacggcggagagaaaaagaaagaagctggtgacggcggaga-aaagaagaaag  942
             ||  ||||||||||||||||| |||||||||| ||||||||||||||| ||| |||||||
Sbjct  881   GGTTGGAGACGGCGGAGAGAAGAAGAAAGAAGGTGGTGACGGCGGAGAGAAA-AAGAAAG  939

Query  943   aagctggagacggaggagagaagaaggaaggtggcggaggaggaggTGTGCCGGCGCCGG  1002
             |||| ||||||||||||||||||||| ||| |||||||||      ||||||||| ||||
Sbjct  940   AAGCCGGAGACGGAGGAGAGAAGAAGAAAGATGGCGGAGG------TGTGCCGGCCCCGG  993

Query  1003  TGGCGATGGTGAATAAGATGGATTATTATGGGTACTCATCTTATCCAACGGCTCCGATGT  1062
             |||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| 
Sbjct  994   TGGCGATGGTGAATAAGATGGATTATTATGGGTACTCAGCTTATCCAACGGCTCCTATGC  1053

Query  1063  ATTGGCAAGAAGGACACGTGTACGGTCAGAGTTATTCGATGGGAGGTCAGAGTTATCCCG  1122
             |||||||||||||||||||||||||||||||||||||||||  |||||||| |||||| |
Sbjct  1054  ATTGGCAAGAAGGACACGTGTACGGTCAGAGTTATTCGATGACAGGTCAGAATTATCCAG  1113

Query  1123  TGGCAGGTCAGAGTTATCCAGGTTCAGGATACAACTACGCGACTGAGAGTTACGTGCCCT  1182
             ||| |||||||||||||||||||||||||||||||||||| | ||||||||||||||| |
Sbjct  1114  TGGGAGGTCAGAGTTATCCAGGTTCAGGATACAACTACGCAAGTGAGAGTTACGTGCCGT  1173

Query  1183  ACTCGCAGCCAAACGTGAACGCTCCTGGAATGTTCAGCGACGAGAACCCCAATGGCTGTT  1242
             || ||||||||||||||||||||||||||||||||||||||||||| |||||||| || |
Sbjct  1174  ACGCGCAGCCAAACGTGAACGCTCCTGGAATGTTCAGCGACGAGAATCCCAATGGTTGCT  1233

Query  1243  CCGTTATGTAATAATGGGGTTAAATTGAAAATATAAGAAACTCTAAGGGTTTATG-CATA  1301
             | |||||||||||||||||||||| || |||||||||||||| ||||||||||   ||||
Sbjct  1234  CTGTTATGTAATAATGGGGTTAAACTGTAAATATAAGAAACTATAAGGGTTTAAAACATA  1293

Query  1302  AATGTGGAAACACAAAACTTAGGT-AAATTTTTGAAAGTCGAGTTTGAGCCAGCGAATTC  1360
             | ||||| ||||||||||||| || ||| ||||||||||| | |||||||||||||||||
Sbjct  1294  ATTGTGGGAACACAAAACTTATGTTAAAATTTTGAAAGTCTACTTTGAGCCAGCGAATTC  1353

Query  1361  TGACGTGTAACGTTGTTCCTTTGTTAGTTAGTTAGTTCTTTGGGGAATG-TTGAATAATT  1419
             ||||||||||| |||||||||   |||||||||  || |||    |||  ||||||||||
Sbjct  1354  TGACGTGTAACATTGTTCCTTAAATAGTTAGTT--TT-TTTC---AATTATTGAATAATT  1407

Query  1420  ACTTACTTTACTTT  1433
             | ||  ||||||||
Sbjct  1408  AATTGTTTTACTTT  1421



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 70632166815


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5