BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg482690
Length=2436
Score E
Sequences producing significant alignments: (Bits) Value
AT2G37040.1 | Symbols: PAL1, ATPAL1 | PHE ammonia lyase 1 | chr... 3925 0.0
AT3G53260.1 | Symbols: PAL2, ATPAL2 | phenylalanine ammonia-lya... 2069 0.0
> AT2G37040.1 | Symbols: PAL1, ATPAL1 | PHE ammonia lyase 1 | chr2:15557376-15560363
REVERSE LENGTH=2530
Length=2530
Score = 3925 bits (2125), Expect = 0.0
Identities = 2306/2394 (96%), Gaps = 9/2394 (0%)
Strand=Plus/Plus
Query 29 TAAAACTAAGATTCAAAAGTCAAAATGGAGATTAACGGAGCACACAA-AGCTAACGGAGG 87
||||||||||| ||||||||| |||||||||||||||| |||||||| ||| ||||||||
Sbjct 104 TAAAACTAAGA-TCAAAAGTCTAAATGGAGATTAACGGGGCACACAAGAGC-AACGGAGG 161
Query 88 ATCAATCGATGCTATGTTATGCGGCGGAGACATCAAGACAAAGAACATGGTGATCAACGC 147
| | | || ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 162 AGGAGTGGACGCTATGTTATGCGGCGGAGACATCAAGACAAAGAACATGGTGATCAACGC 221
Query 148 GGAAGATCCTCTCAACTGGGGAGCTGCGGCTGAGCAAATGAAAGGAAGCCATTTGGATGA 207
||| ||||||||||||||||||||||| || |||||||||||||| ||||||||||||||
Sbjct 222 GGAGGATCCTCTCAACTGGGGAGCTGCAGCGGAGCAAATGAAAGGTAGCCATTTGGATGA 281
Query 208 AGTGAAGAGAATGGTTGCTGAGTTTAGGAAGCCAGTGGTGAATCTTGGAGGTGAGACTCT 267
|||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||
Sbjct 282 AGTGAAGAGAATGGTTGCTGAGTTTAGGAAGCCAGTTGTGAATCTTGGTGGTGAGACTCT 341
Query 268 GACCATTGGACAAGTGGCTGCGATCTCAACCATTGGTAACGGTGTGAAGGTGGAGCTGTC 327
|||||||||||||||||||||||||||||| ||||||||| |||||||||||||||| ||
Sbjct 342 GACCATTGGACAAGTGGCTGCGATCTCAACTATTGGTAACAGTGTGAAGGTGGAGCTATC 401
Query 328 GGAGACCGCTAGAGCCGGTGTGAATGCGAGTAGTGATTGGGTTATGGAGAGTATGAACAA 387
|||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 402 GGAGACAGCTAGAGCCGGTGTGAATGCTAGTAGTGATTGGGTTATGGAGAGTATGAACAA 461
Query 388 AGGCACTGATAGTTATGGTGTTACTACTGGTTTTGGTGCTACTTCTCATCGGAGAACCAA 447
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 462 AGGCACTGATAGTTATGGTGTTACTACTGGTTTTGGTGCTACTTCTCATCGGAGAACCAA 521
Query 448 AAACGGTGTCGCACTTCAGAAGGAGCTTATTAGATTCCTTAACGCCGGAATATTCGGAAG 507
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 522 AAACGGTGTCGCACTTCAGAAGGAACTTATTAGATTCCTTAACGCCGGAATATTCGGAAG 581
Query 508 CACGAAAGAAACAAGCCACACATTGCCACACTCCGCCACAAGAGCCGCCATGCTTGTACG 567
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 582 CACGAAAGAAACAAGCCACACATTGCCACACTCCGCCACAAGAGCCGCCATGCTTGTACG 641
Query 568 AATCAACACTCTCCTCCAAGGATTTTCCGGTATCCGCTTCGAGATTCTCGAAGCAATCAC 627
|||||||||||||||||||||||||||||||||||| || ||||||||||||||||| ||
Sbjct 642 AATCAACACTCTCCTCCAAGGATTTTCCGGTATCCGATTTGAGATTCTCGAAGCAATTAC 701
Query 628 CAGTTTCCTCAACAACAACATCACTCCATCTCTCCCACTCCGCGGTACAATCACCGCCTC 687
|||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||
Sbjct 702 CAGTTTCCTCAACAACAACATCACTCCATCTCTCCCCCTCCGTGGTACAATCACCGCCTC 761
Query 688 CGGAGATCTCGTTCCTCTCTCTTACATCGCCGGAATTCTAACCGGCCGTCCCAATTCCAA 747
||||||||||||||||||||| |||||||||||| |||| ||||| ||||||||||||||
Sbjct 762 CGGAGATCTCGTTCCTCTCTCCTACATCGCCGGACTTCTCACCGGTCGTCCCAATTCCAA 821
Query 748 AGCTACCGGTCCCAACGGTGAAGCTTTAACCGCTGAAGAAGCCTTCAAATTAGCTGGAAT 807
|||||| ||||||||||||||||||||||| || || ||||| ||||||||||| |||||
Sbjct 822 AGCTACTGGTCCCAACGGTGAAGCTTTAACAGCAGAGGAAGCTTTCAAATTAGCAGGAAT 881
Query 808 CAGCTCCGGATTCTTCGATCTCCAGCCTAAGGAAGGTCTCGCGCTTGTCAATGGCACGGC 867
||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 882 CAGCTCCGGATTCTTTGATCTCCAGCCTAAGGAAGGTCTCGCGCTAGTCAATGGCACGGC 941
Query 868 GGTTGGATCTGGAATGGCGTCGATGGTGTTATTCGAAACGAATGTTCTCTCTGTTTTGGC 927
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 942 GGTTGGATCTGGAATGGCGTCAATGGTGTTATTCGAAACGAATGTTCTCTCTGTTTTGGC 1001
Query 928 TGAGATTTTGTCGGCGGTTTTCGCAGAGGTGATGAGTGGTAAGCCTGAATTCACCGATCA 987
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1002 TGAGATTTTGTCGGCGGTTTTCGCAGAGGTGATGAGTGGTAAGCCTGAGTTCACCGATCA 1061
Query 988 TCTCACTCACAGACTCAAACATCACCCCGGTCAAATCGAAGCGGCGGCGATAATGGAACA 1047
||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| ||
Sbjct 1062 TCTCACTCACAGACTTAAACATCATCCCGGTCAAATCGAAGCGGCGGCGATAATGGAGCA 1121
Query 1048 TATCCTCGACGGAAGCTCGTACATGAAATTAGCTCAGAAGCTTCACGAAATGGATCCGTT 1107
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1122 TATCCTCGACGGAAGCTCGTACATGAAATTAGCTCAGAAGCTTCACGAGATGGATCCGTT 1181
Query 1108 ACAGAAACCAAAACAAGATCGTTACGCTCTTCGTACTTCTCCTCAATGGTTAGGTCCTCA 1167
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1182 ACAGAAACCTAAACAAGATCGTTACGCTCTTCGTACTTCTCCTCAATGGTTAGGTCCTCA 1241
Query 1168 AATCGAAGTAATCCGTTACGCAACGAAATCGATCGAGCGTGAGATTAACTCCGTCAACGA 1227
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1242 AATCGAAGTGATCCGTTACGCAACGAAATCGATCGAGCGTGAGATTAACTCCGTCAACGA 1301
Query 1228 TAATCCGTTGATCGATGTATCGAGGAACAAGGCGATTCACGGTGGTAACTTCCAAGGAAC 1287
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1302 TAATCCGTTGATCGATGTTTCGAGGAACAAGGCGATTCACGGTGGTAACTTCCAAGGAAC 1361
Query 1288 ACCAATCGGAGTTTCAATGGATAACACGAGATTGGCGATTGCAGCGATTGGTAAACTCAT 1347
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1362 ACCAATCGGAGTTTCAATGGATAACACGAGATTGGCGATAGCAGCGATTGGTAAACTCAT 1421
Query 1348 GTTTGCTCAATTCTCAGAGCTTGTGAATGATTTCTACAACAATGGTTTACCTTCGAATCT 1407
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1422 GTTTGCTCAATTCTCAGAGCTTGTGAATGATTTCTACAACAATGGTTTACCCTCGAATCT 1481
Query 1408 AACCGCATCGAGGAATCCAAGTTTGGATTATGGATTCAAAGGAGCTGAGATTGCAATGGC 1467
|||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1482 AACCGCTTCGAGGAATCCAAGTTTGGATTATGGATTCAAGGGAGCTGAGATTGCAATGGC 1541
Query 1468 TTCTTATTGTTCAGAGCTTCAATACTTAGCTAATCCTGTGACTAGCCATGTTCAATCAGC 1527
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1542 TTCTTATTGTTCAGAGCTTCAATACTTAGCTAATCCTGTGACTAGCCATGTTCAATCAGC 1601
Query 1528 AGAGCAACATAACCAAGATGTGAACTCTTTGGGACTAATCTCATCTCGCAAAACTTCTGA 1587
||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||
Sbjct 1602 AGAGCAACATAACCAAGATGTCAACTCTTTGGGACTAATCTCGTCTCGCAAAACTTCTGA 1661
Query 1588 AGCTGTTGATATTCTCAAGCTTATGTCAACAACGTTCCTCGTTGCGATTTGTCAAGCTGT 1647
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1662 AGCTGTTGATATTCTCAAGCTTATGTCAACAACGTTCCTCGTTGCGATTTGTCAAGCTGT 1721
Query 1648 GGATTTGAGACATTTGGAGGAGAATCTGAAACAGACTGTGAAGAACACTGTTTCTCAAGT 1707
||||||||||||||||||||||||| ||| ||||||||||||||||||||| ||||||||
Sbjct 1722 GGATTTGAGACATTTGGAGGAGAATTTGAGACAGACTGTGAAGAACACTGTCTCTCAAGT 1781
Query 1708 GGCCAAGAAAGTTCTTACTACTGGTGTCAATGGTGAGCTTCATCCTTCTCGCTTCTGCGA 1767
||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1782 GGCGAAGAAAGTTCTTACTACTGGAGTCAATGGTGAGCTTCATCCTTCTCGCTTCTGCGA 1841
Query 1768 GAAGGATTTACTCAAAGTCGTTGACCGTGAACAAGTCTACACATACGCGGATGATCCTTG 1827
||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct 1842 AAAGGATTTACTCAAAGTTGTAGACCGTGAACAAGTCTACACATACGCGGATGATCCTTG 1901
Query 1828 TAGCGCAACGTACCCGTTGATTCAGAAGCTAAGACAAGTTATAGTTGATCATGCTTTGAT 1887
|||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||
Sbjct 1902 TAGCGCAACGTACCCGTTGATTCAGAAGCTGAGACAAGTTATTGTTGACCATGCTTTGAT 1961
Query 1888 CAATGGTGAGAGTGAGAAGAATGCAGTGACTTCAATCTTCCATAAGATTGGAGCTTTTGA 1947
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1962 CAATGGTGAGAGTGAGAAGAATGCAGTGACTTCAATCTTCCATAAGATTGGAGCTTTCGA 2021
Query 1948 GGAGGAGCTTAAAGCGGTGCTACCGAAAGAAGTGGAGGCAGCAAGAGCGGCGTACGACAA 2007
|||||||||||| || |||||||||||||||||||| ||||||||||| || ||||| ||
Sbjct 2022 GGAGGAGCTTAAGGCAGTGCTACCGAAAGAAGTGGAAGCAGCAAGAGCAGCCTACGATAA 2081
Query 2008 CGGAACATCAGCTATCCCGAACAGGATCAAGGAATGTAGGTCGTATCCTTTGTATAGATT 2067
||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 2082 CGGAACATCGGCTATCCCGAACAGGATCAAGGAATGTAGGTCGTATCCATTGTATAGATT 2141
Query 2068 CGTGAGGGAGGAGCTTGGAACAGAGCTTTTGACCGGAGAGAAAGTGACATCGCCCGGAGA 2127
||||||||| |||||||||||||||||||||||||||||||||||||| ||||| |||||
Sbjct 2142 CGTGAGGGAAGAGCTTGGAACAGAGCTTTTGACCGGAGAGAAAGTGACGTCGCCTGGAGA 2201
Query 2128 AGAGTTTGATAAGGTGTTCACGGCGATTTGTGAAGGTAAAATCATTGATCCGATGATGGA 2187
|||||| || ||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2202 AGAGTTCGACAAGGTTTTCACGGCGATTTGTGAAGGTAAAATCATTGATCCGATGATGGA 2261
Query 2188 ATGTCTCAACGAGTGGAACGGAGCTCCCATTCCTATATGTTAAGAGTAAAGTCCTCTGtt 2247
||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct 2262 ATGTCTCAACGAGTGGAACGGAGCTCCCATTCCAATATGTTAAGAGTATAGTCCTCTGTT 2321
Query 2248 ttttttCTTACCATAAAGTCttttttttttttACATGTCTGAATAATTTTACCAAATGAT 2307
||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 2322 TTTTT-CTTACCATAAAGTCTTTTTTTTTTT-ACATGTCTGAATAATTTTACCAAATGAT 2379
Query 2308 TGTCTGTGAAGTGGTTTTATGTCTGTCTAATTTAAATTTGTGTGTAAAACTCATTGTAAG 2367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2380 TGTCTGTGAAGTGGTTTTATGTCTGTCTAATTTAAATTTGTGTGTAAAACTCATTGTAAG 2439
Query 2368 TTCTCAAATGAACAATTTTTCTTTTACTACAA--AATGTGTGAATCATACCTTC 2419
||||||||||||||||||||||||||| | || ||||||||||||||||||||
Sbjct 2440 TTCTCAAATGAACAATTTTTCTTTTAC-A-AATTAATGTGTGAATCATACCTTC 2491
> AT3G53260.1 | Symbols: PAL2, ATPAL2 | phenylalanine ammonia-lyase
2 | chr3:19744051-19746780 REVERSE LENGTH=2520
Length=2520
Score = 2069 bits (1120), Expect = 0.0
Identities = 1784/2102 (85%), Gaps = 56/2102 (3%)
Strand=Plus/Plus
Query 182 CAAATGAAAGGAAGCCATTTGGATGAAGTGAAG-AGAATGGTTGCTGAGTTTAGGAAG-C 239
|||||||||||||| ||||| |||||||||||| || ||||| | |||| | | || |
Sbjct 267 CAAATGAAAGGAAGTCATTTAGATGAAGTGAAGAAG-ATGGTCGAAGAGTAT-CGTAGAC 324
Query 240 CAGTGGTGAATCTTGGAGGTGAGACTCTGACCATTGGACAAGTGGCTGCGATCTCAACCA 299
|||| ||||||||||| || || || ||||| || |||||||| ||||| ||||| |||
Sbjct 325 CAGTCGTGAATCTTGGCGGAGAAACACTGACGATCGGACAAGTTGCTGCCATCTCCACCG 384
Query 300 TTGGTA-ACGGTGTGAAGGTGGAGCT-GTCGGAGACCGCTAGAGCCGGTGTGAATGCGAG 357
| || | | | || ||||| ||| | | ||||||| | |||||||||||||| || ||
Sbjct 385 TAGG-AGGCAGCGTTAAGGTTGAGTTAG-CGGAGACTTCAAGAGCCGGTGTGAAAGCTAG 442
Query 358 TAGTGATTGGGTTATGGAGAGTATGAACAAAGGCACTGATAGTTATGGTGTTACTACTGG 417
|||||||||||||||||||| ||||||||||| ||||| ||||| || || || || ||
Sbjct 443 CAGTGATTGGGTTATGGAGAGCATGAACAAAGGTACTGACAGTTACGGAGTCACCACCGG 502
Query 418 TTTTGGTGCTACTTCTCATCGGAGAACCAAAAACGGTGTCGCACTT-CAGAA-GGAGCTT 475
||||||||||||||||| ||||||||||||||||| |||| || || || || ||
Sbjct 503 CTTTGGTGCTACTTCTCACCGGAGAACCAAAAACGGCACCGCA-TTACA-AACAGAACTC 560
Query 476 ATTAGATTCCTT-AACGCCGGAATATTCGGAAGCACGAAAGAAACAAGCCACACATTGCC 534
|||||||| || ||||||||||||||||||| |||||| || ||| | |||||| ||||
Sbjct 561 ATTAGATT-TTTGAACGCCGGAATATTCGGAAACACGAAGGAGACATGTCACACACTGCC 619
Query 535 ACACTCCGCCACAAGAGCCGCCATGCTTGTAC-GAATCAACACTCTCCTCCAAGGATTTT 593
|| ||||||||||||||||||||||| || | || |||||||||| |||||||||| |
Sbjct 620 GCAATCCGCCACAAGAGCCGCCATGCTCGT-CAGAGTCAACACTCTTCTCCAAGGATACT 678
Query 594 CCGGTATCCGCTTCGAGATTCTCGAAGCAATCACCAGTTTCCTCAACAACAACATCACTC 653
|||| ||||| |||||||| |||||||| || || ||| |||||||| |||||||| |||
Sbjct 679 CCGGGATCCGATTCGAGATCCTCGAAGCGATTACAAGTCTCCTCAACCACAACATCTCTC 738
Query 654 CATCTCTCCCACTCCGCGGTACAATCACCGCCTCCGGAGATCTCGTTCCTCTCTCTTACA 713
| || || || ||||| || || || ||||||||||| ||||||||||||||||||||||
Sbjct 739 CGTCACTACCTCTCCGTGGAACCATTACCGCCTCCGGCGATCTCGTTCCTCTCTCTTACA 798
Query 714 TCGCCGGAATTCTAACCGGCCGTCCCAATTCCAAAGCTACCGGTCCCAACGGTGAAGCTT 773
|||||||| |||| ||||||||||| ||||||||||| ||||||||| |||||||| |
Sbjct 799 TCGCCGGACTTCTCACCGGCCGTCCTAATTCCAAAGCCACCGGTCCCGACGGTGAATCGC 858
Query 774 TAACCGCTG-AAGAAGC-CTTCA-AATTAGCTGGAATCAGCT-CCGGATTCTTCGATCTC 829
||||||| | ||||||| || | || ||| |||||||| | | |||||||||||| |
Sbjct 859 TAACCGC-GAAAGAAGCTTTTGAGAA--AGCCGGAATCAG-TACTGGATTCTTCGATTTA 914
Query 830 CAGCCTAAGGAAGGTCTCGCGCTTGTCAATGGCACGGCGGTTGGATCTGGAATGGCGTCG 889
|| |||||||||||| | || || || |||||||||||||||||||||||||||||||||
Sbjct 915 CAACCTAAGGAAGGTTTAGCTCTCGTTAATGGCACGGCGGTTGGATCTGGAATGGCGTCG 974
Query 890 ATGGTGT-TATTCGAAACGAATGTTCTCTCTGTTTTGGCTGAGATTTTGTCGGCGGTTTT 948
||||| | |||||||| ||||||| | | || || || ||| |||| || ||| | ||
Sbjct 975 ATGGT-TCTATTCGAAGCGAATGTCCAAGCGGTGTTAGCGGAGGTTTTATCAGCGATCTT 1033
Query 949 CGCAGAGGTGATGAGTGGTAAGCCTGAATTCACCGATCATCTCACTCA-CAGACTCAAAC 1007
||| ||||| ||||| || || ||||| || ||||||||||| ||||| | | | ||||
Sbjct 1034 CGCGGAGGTTATGAGCGGGAAACCTGAGTTTACCGATCATCTGACTCATC-GTTTAAAAC 1092
Query 1008 ATCACCCCGGTCAAATCGAAGCGGCGGCGATAATGGAACATATCCTCGACGGAAGCTCGT 1067
|||| ||||| |||||||||||||||||||||||||| || || |||||||||||||| |
Sbjct 1093 ATCATCCCGGACAAATCGAAGCGGCGGCGATAATGGAGCACATACTCGACGGAAGCTCAT 1152
Query 1068 ACATGAAATTAGCTCAGAAGCTTCACGAAATGGATCCGTTACAGAAACCAAAACAAGATC 1127
|||||||||||||||| ||| ||||||| |||||||| || |||||||||||||||||||
Sbjct 1153 ACATGAAATTAGCTCAAAAGGTTCACGAGATGGATCCATTGCAGAAACCAAAACAAGATC 1212
Query 1128 GTTACGCTCTTCGTACTTCTCCTCAATGGTTAGGTCCTCAAATCGAAGTAATCCGTTACG 1187
|||||||||||||||| |||||||||||| ||||||||||||| |||||||||||| | |
Sbjct 1213 GTTACGCTCTTCGTACATCTCCTCAATGGCTAGGTCCTCAAATTGAAGTAATCCGTCAAG 1272
Query 1188 CAACGAAATCGATCGAGCGTGAGATTAACTCCGTCAACGATAATCCGTTGATCGATGTAT 1247
| ||||||||||| |||||||| || |||||||| ||||||||||||||||||||||| |
Sbjct 1273 CTACGAAATCGATAGAGCGTGAAATCAACTCCGTTAACGATAATCCGTTGATCGATGTTT 1332
Query 1248 CGAGGAACAAGGCGATTCACGGTGGTAACTTCCAAGGAACACCAATCGGAGTTTCAATGG 1307
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1333 CGAGGAACAAGGCGATTCACGGTGGTAACTTCCAAGGAACACCAATCGGAGTTTCTATGG 1392
Query 1308 ATAACACGAGATTGGCGATTGCAGCGATTGGTAAACTCATGTTTGCTCAATTCTCAGAGC 1367
|||||||||||||||||||||| |||||||| || || ||||||||||||||||| ||||
Sbjct 1393 ATAACACGAGATTGGCGATTGCTGCGATTGGGAAGCTAATGTTTGCTCAATTCTCTGAGC 1452
Query 1368 TTGTGAATGATTTCTACAACAATGGT-TTACCTTCGAATCTAACCGCATCGAGGAATCCA 1426
|||| |||||||||||||||||||| || |||||||||||||| || ||||| ||||||
Sbjct 1453 TTGTTAATGATTTCTACAACAATGGACTT-CCTTCGAATCTAACTGCTTCGAGTAATCCA 1511
Query 1427 AGTTTGGATTATGGATTCAAAGGAGCTGAGATTGCAATGGCTTCTTATTGTTCAGAGCTT 1486
|||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||
Sbjct 1512 AGTTTGGATTATGGATTCAAAGGAGCAGAGATTGCTATGGCTTCTTATTGTTCTGAGCTT 1571
Query 1487 CAATACTTAGCTAATCCTGTGACTAGCCATGTTCAATCAGCAGAGCAACATAACCAAGAT 1546
|||||||| |||||||| || || ||||||||||||||||| ||||||||||| ||||||
Sbjct 1572 CAATACTTGGCTAATCCAGTCACAAGCCATGTTCAATCAGCTGAGCAACATAATCAAGAT 1631
Query 1547 GTGAACTCT-TTGGGACTAATCTCATCTCGCAAAACTTCTGAAGCTGTTGATATTCTCAA 1605
||||||||| |||| | ||||| ||||| ||||| ||||||||||| |||||||| ||
Sbjct 1632 GTGAACTCTCTTGGTT-TGATCTCGTCTCGTAAAACATCTGAAGCTGTGGATATTCTTAA 1690
Query 1606 GCTTATGTCAACAACGTTCCTCGTTGCGATTTGTCAAGCTGTGGATTTGAGACATTTGGA 1665
||| ||||||||||||||||| || | ||| ||||||||||| |||||||||||||||||
Sbjct 1691 GCTAATGTCAACAACGTTCCTTGTGGGGATATGTCAAGCTGTTGATTTGAGACATTTGGA 1750
Query 1666 GGAGAATCTGAAACAGACTGTGAAGAACACTGTTTCTCAAGTGGCCAAGAAAGTTCTTA- 1724
||||||||||| ||| |||||||||||||| ||||||||||| || |||||||| |||
Sbjct 1751 GGAGAATCTGAGACAAACTGTGAAGAACACAGTTTCTCAAGTTGCTAAGAAAGTG-TTAA 1809
Query 1725 CTACTGGTGTCAATGGTGAGCTT-CATCCTTCTCGCTTCTGCGAGAAGGATTTACTCAAA 1783
| ||||| |||| |||||| || ||||| || | || ||||||||||| || || ||
Sbjct 1810 CCACTGGAATCAACGGTGAG-TTACATCCGTCAAGGTTTTGCGAGAAGGACTTGCTTAAG 1868
Query 1784 GTCGTTGACCGTGAACAAGTCTACACATACGCGGATGATCCTTGTAGCGCAACGTACCCG 1843
|| ||||| ||||| ||||| | ||| || | |||||||||||||||||| |||||||||
Sbjct 1869 GTTGTTGATCGTGAGCAAGTGTTCACGTATGTGGATGATCCTTGTAGCGCTACGTACCCG 1928
Query 1844 TTGATTCAGA-AGCTAAGACAAGTTATAGTTGATCATGCTTTGATC-AATGGTGAGAGTG 1901
||||| |||| | |||||||||||||| |||||||| |||||| || || ||||||| ||
Sbjct 1929 TTGATGCAGAGA-CTAAGACAAGTTATTGTTGATCACGCTTTG-TCCAACGGTGAGACTG 1986
Query 1902 AGAAGAATGCAGTGACTTCAATCTTCCATAAGATTGGAGCTTTTGAGGAGGAGCTTAAAG 1961
||||||||||||||||||| ||||| || ||||||||||||||||| ||||||||||| |
Sbjct 1987 AGAAGAATGCAGTGACTTCGATCTTTCAAAAGATTGGAGCTTTTGAAGAGGAGCTTAAGG 2046
Query 1962 CGGTGCTACCGAAAG-AAGTGGAGGCAGCAAGAGCGGCGTACGACAACGGAACAT-CAGC 2019
| ||||| || |||| |||| || || || |||||||| || | || ||||| | | ||
Sbjct 2047 CTGTGCTTCC-AAAGGAAGTTGAAGCGGCTAGAGCGGCTTATGGGAATGGAAC-TGC-GC 2103
Query 2020 T-ATCCCGAACAGGATCAAGGAATGTAGGTCGTATCCTTTGTATAGATTCGTGAGGGAGG 2078
|| || ||| |||| |||||||||||||||||||| |||||||| ||||||||||| |
Sbjct 2104 CGATTCCTAACCGGATTAAGGAATGTAGGTCGTATCCGTTGTATAGGTTCGTGAGGGAAG 2163
Query 2079 AGCTTGGAACAGA-GCTT-TTGACCGGAGAGAAAG-T-GACATCGCCCGGAGAAGAGTTT 2134
|||||||||| || | || ||||| ||||| |||| | | || || ||||| ||||||
Sbjct 2164 AGCTTGGAAC-GAAG-TTGTTGACTGGAGA-AAAGGTTGTG-TCTCCGGGAGAGGAGTTT 2219
Query 2135 GATAAGGTGTTCACGGCGATTTGTGAAGGTAAAATCATTGATCCGATGATGGAATGTCTC 2194
|||||||| ||||| || || |||||||||||| | ||||||||| ||||||| ||||||
Sbjct 2220 GATAAGGTCTTCACTGCTATGTGTGAAGGTAAACTTATTGATCCGTTGATGGATTGTCTC 2279
Query 2195 AACGAGTGGAACGGAGCTCCCATTCCTATATGTTAAGAGTAA-AGTCCTCTGtttttttt 2253
|| || |||||||||||||| ||||| || || |||||| | | |||||||||| | ||
Sbjct 2280 AAGGAATGGAACGGAGCTCCGATTCCGATTTGCTAAGAG-AGCATTCCTCTGTTTCTGTT 2338
Query 2254 CT 2255
||
Sbjct 2339 CT 2340
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 120983313450
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5