BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg482903 Length=520 Score E Sequences producing significant alignments: (Bits) Value AT2G38870.1 | Symbols: | Serine protease inhibitor, potato inh... 621 2e-177 > AT2G38870.1 | Symbols: | Serine protease inhibitor, potato inhibitor I-type family protein | chr2:16236381-16237280 REVERSE LENGTH=608 Length=608 Score = 621 bits (336), Expect = 2e-177 Identities = 471/530 (89%), Gaps = 34/530 (6%) Strand=Plus/Plus Query 1 AAAACCATAAGTGTCAAAGCTTTTACCAAACAAATTAATAATGTCAAGGGAGGGG--A-T 57 |||| || ||||||||||||||||||||||||||||||||||||||| | ||||| | | Sbjct 3 AAAATCAGAAGTGTCAAAGCTTTTACCAAACAAATTAATAATGTCAACGAAGGGGCTATT 62 Query 58 -----C--G---C--CAAAGTTTGACTTTTGAATCTGCAACCTCATCGACGACACCGACA 105 | | | |||||||||||||||||||||||||||||| |||||||||||||| Sbjct 63 AAAAGCTGGTTTCGTCAAAGTTTGACTTTTGAATCTGCAACCTCACCGACGACACCGACA 122 Query 106 CCAAG-C----C---C-TATCCGATTCTATATAAATGGGACTAAAATCCCTAAAGATGAG 156 ||||| | | | |||||||||| ||||||||||||| ||||| |||||| |||| Sbjct 123 CCAAGACGTAACGTACGTATCCGATTC--TATAAATGGGACTCAAATCTCTAAAGGTGAG 180 Query 157 CATACAAATACATCA-CA-ACTACATAAATATATACAAGAGGGAAGAAAAATGTCGTCCG 214 ||||||||||||||| | |||||||||||||||||||||| |||||||||||||| ||| Sbjct 181 CATACAAATACATCAGAAGACTACATAAATATATACAAGAGTGAAGAAAAATGTCGACCG 240 Query 215 AATGTCCTAGGAAGAACTCGTGGCCGGAACTTAGGGGAACAAATGGTGACTATGCGGCGG 274 |||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| | Sbjct 241 AATGTCCTAGGAAGAACTCGTGGCCGGAGCTTACGGGAACAAATGGTGACTATGCGGCCG 300 Query 275 CGGTGATAGAGAGAGAGAACCCAACCGTCGATGCTGTCGTGATTTTGGATGGGAGTCCGG 334 ||||||||||||||||||||| |||||| |||||| ||||||||||||||||||||||| Sbjct 301 TGGTGATAGAGAGAGAGAACCCCACCGTCAATGCTGCCGTGATTTTGGATGGGAGTCCGG 360 Query 335 TGACCGCAGACTTCAGGTGCGACCGGGTCAGGGTTTTTGTTGATAGAAACCGTATCGTCG 394 ||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| Sbjct 361 TGACCGCAGACTTCAGGTGCGACCGGGTCAGAGTTTTTGTTGATGGAAACCGTATCGTCG 420 Query 395 TCAAAACCCCTACATCCGGCTAGACTTGTATAATTTCTATATGCATTAAAT-AAGAAAGC 453 |||||||||| | ||||||||||||||||||||||||||||| ||| || | || ||||| Sbjct 421 TCAAAACCCCCAAATCCGGCTAGACTTGTATAATTTCTATATTCAT-AA-TGAA-AAAGC 477 Query 454 TATAGACGA-TGCGTGGTTGGTTAGTAATCAGTCATGTAAAATAATTATC 502 ||||||||| | ||||||||||||||||||| |||||||||||||| ||| Sbjct 478 TATAGACGAGT-CGTGGTTGGTTAGTAATCAATCATGTAAAATAATAATC 526 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 24865902765 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5