BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg482959
Length=1169
Score E
Sequences producing significant alignments: (Bits) Value
AT2G39400.1 | Symbols: | alpha/beta-Hydrolases superfamily pro... 1705 0.0
AT3G55180.1 | Symbols: | alpha/beta-Hydrolases superfamily pro... 715 0.0
> AT2G39400.1 | Symbols: | alpha/beta-Hydrolases superfamily protein
| chr2:16452612-16454801 FORWARD LENGTH=1194
Length=1194
Score = 1705 bits (923), Expect = 0.0
Identities = 1055/1115 (95%), Gaps = 23/1115 (2%)
Strand=Plus/Plus
Query 1 AAATCAGACAACAACTAACTCTTTCCCTCTCGCTCTCCTCATAAATCCCTCTGAAAACAA 60
|||||||||||||||||||||||||||||||||||||| ||||||||||| || ||||||
Sbjct 1 AAATCAGACAACAACTAACTCTTTCCCTCTCGCTCTCCGCATAAATCCCTTTG-AAACAA 59
Query 61 GAAAATATCTTAACTTTGTATAAAAACAGAACaaaaaaaCAGAGGATCATGGTTATGTAT 120
|| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 60 GATCATATCTTAACTTTGTATAAAAACAGGACAAAAAAACAGAGGATCATGGTTATGTAT 119
Query 121 GAAGAGGATTTTGTGTTGAACTCACGAGGCATGAAGTTGTTCACTTGTGTATGGAAACCA 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 120 GAAGAGGATTTTGTGTTGAACTCACGAGGCATGAAGTTGTTCACTTGTGTATGGAAACCA 179
Query 181 GTGAAGCAAGACCCAAAGGCATTGCTCTTCCTCTGCCATGGCTACGCTATGGAGTCCAGC 240
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 180 GTGAAGCAAGAACCAAAGGCATTGCTCTTCCTCTGCCATGGCTACGCTATGGAGTCCAGC 239
Query 241 ATCACCATGAACAGTTCAGTCAGATGCACAGCCACGAGGCTAGCCAAGGCCGGTTTTGCG 300
||||||||| | | ||| | | ||||||||||| ||||||| |||||||||||
Sbjct 240 ATCACCATG-A-A---CAG-C----G--CAGCCACGAGGTTAGCCAATGCCGGTTTTGCC 287
Query 301 GTCTATGGAATGGACTATGAAGGACATGGAAAATCCGAGGGTCTAAATGGTTACATCAGT 360
|| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 288 GTATATGGAATGGACTATGAAGGACATGGAAAATCTGAGGGTCTAAATGGTTACATCAGT 347
Query 361 AACTTTGATGATCTCGTTGATGATGTCTCTAATCATTATTCTACAATTTGTGAGAAGGAA 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 348 AACTTTGATGATCTCGTTGATGATGTCTCTAATCATTATTCTACAATTTGTGAGAGGGAA 407
Query 421 GAGAACAAGGGGAAGATGAGGTTCCTACTCGGAGAATCCATGGGAGGAGCAGTTGTGTTG 480
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 408 GAGAACAAGGGGAAGATGAGGTTCCTACTTGGAGAATCCATGGGAGGAGCAGTTGTGTTG 467
Query 481 CTCTTAGCCAGAAAGAAGCCTGATTTTTGGGACGGTGCCGTTTTGGTCGCACCCATGTGT 540
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 468 CTCTTAGCCAGAAAGAAGCCTGATTTTTGGGACGGTGCCGTTTTGGTAGCACCCATGTGT 527
Query 541 AAGTTAGCAGACGAGATAAAGCCACATCCAGTAGTGATCTCAATCCTTATTAAACTT-GC 599
||||||||||||||||||||||||||||||||||||||||||||||||| | || || ||
Sbjct 528 AAGTTAGCAGACGAGATAAAGCCACATCCAGTAGTGATCTCAATCCTTA-TCAAGTTAGC 586
Query 600 CAAGTTTATTCCGACGTGGAAAATAGTTCCAGGAAATGATATTATTGACATTGCAATTAA 659
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 587 CAAGTTTATTCCAACGTGGAAAATAGTTCCAGGAAATGATATTATTGACATTGCAATTAA 646
Query 660 AGAACCTCACATCAGAAATCAGGTGAGGGAGAACAAGTATTGCTATAAAGGCCGGCCTCG 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 647 AGAACCTCACATCAGAAATCAGGTGAGGGAGAACAAGTATTGCTATAAAGGCCGGCCTCG 706
Query 720 CCTCAACACCGCCTACCAACTCTTGTTGGTTAGCTTAGATCTTGAGAAGAATCTTGACCA 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 707 CCTCAACACCGCCTACCAACTCTTGTTGGTTAGCTTAGATCTTGAGAAGAATCTTCACCA 766
Query 780 GGTATCAATTCCTTTCATTGTTCTTCACGGAGAAGATGATAAAGTGACGGACAAAAGCAT 839
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 767 GGTATCAATTCCTTTCATTGTTCTTCACGGAGAAGATGATAAAGTGACGGATAAAAGCAT 826
Query 840 AAGCAAAATGTTATACGAAGTGGCTTCAACCTCGGACAAGACATTCAAGTTGTACCCCAA 899
||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||
Sbjct 827 AAGCAAAATGTTATACGAAGTGGCTTCAAGCTCGGACAAGACATTCAAGCTGTACCCCAA 886
Query 900 AATGTGGCATGCGTTGTTATATGGAGAAACTTCTGAAAATTCAGAAATTGTGTTTGGTGA 959
|||||||||||| ||||| ||||| |||||| |||||||||||||||||||||||||||
Sbjct 887 AATGTGGCATGCTTTGTTGTATGGGGAAACTAATGAAAATTCAGAAATTGTGTTTGGTGA 946
Query 960 TATCATAAACTGGCTGGAGGATAGAGCCACCGATTCGAACAGAGCGTTAGAGAGTCAGCT 1019
||||||||||||| |||| ||||||||||| ||||||||| ||| |||||||||||||||
Sbjct 947 TATCATAAACTGGTTGGAAGATAGAGCCACAGATTCGAACGGAGGGTTAGAGAGTCAGCT 1006
Query 1020 AAAACATAAGCATGATGGATTCTTGAAGCATAAATAAGTGAACGATA-CA--GTCTCt-t 1075
||||||||||||||||||||||||||||||||||||||||||||||| || || | | |
Sbjct 1007 AAAACATAAGCATGATGGATTCTTGAAGCATAAATAAGTGAACGATAGCATTGTTTATGT 1066
Query 1076 ----ttttttGGGCAGCCGTTTGTGTACTTGTGTA 1106
|||||| ||||| |||| ||||||||||||
Sbjct 1067 ACCCTTTTTTTTGCAGCGGTTTATGTACTTGTGTA 1101
Score = 100 bits (54), Expect = 3e-20
Identities = 56/57 (98%), Gaps = 0/57 (0%)
Strand=Plus/Plus
Query 1113 ATACTTTACCTACGAAGTTACTTGTGAAATAAGTAGTGAAGTATATTATATTTACGG 1169
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1138 ATACTTTACCTACGAAGTTACTTGTGAAATAAGTAGTGAAGTATTTTATATTTACGG 1194
> AT3G55180.1 | Symbols: | alpha/beta-Hydrolases superfamily protein
| chr3:20454903-20456682 FORWARD LENGTH=939
Length=939
Score = 715 bits (387), Expect = 0.0
Identities = 730/892 (82%), Gaps = 37/892 (4%)
Strand=Plus/Plus
Query 109 ATGGTTATGTATGAAGAGGATTTTGTGTT-GAACTCACGAGGCAT-GAAGTTGTTCACTT 166
||||||||||| ||||||||| ||| || |||||||||||| || || || ||||| |
Sbjct 1 ATGGTTATGTACAAAGAGGATTATGT-TTCGAACTCACGAGGGATACAACTT-TTCACGT 58
Query 167 GTGT-ATGGAAACCAG-TGA--AGCAAGACCCAAAGGCATTGCTCTTCCTCTGCCATGGC 222
|| | |||||||| || || ||||||| |||||||| || |||| ||||| ||||||
Sbjct 59 GT-TCATGGAAACAAGAGGAGCAGCAAGAACCAAAGGCTTTAATCTTTCTCTGTCATGGC 117
Query 223 TACGCTATGGAGTCCAGCATCACCATGAACAGTTCAGTCAGATGCACAGCCACGAGGCTA 282
||||| ||||| || |||||||||||| || ||| || || ||| |||| |
Sbjct 118 TACGCCATGGAATCAAGCATCACCATG---AG--CAG-CA-CTG--CAG---TGAGGTTG 165
Query 283 GCCAAGGCCGGTTT-TGCGGTCTATGGAATGGACTATGAAGGACATGGAAAATCCGAGGG 341
||||| || ||||| | ||||||||||||||||||||||||| ||||| ||||||| |||
Sbjct 166 GCCAATGCGGGTTTCT-CGGTCTATGGAATGGACTATGAAGGGCATGGTAAATCCGGGGG 224
Query 342 -TCTAAATGGTTACATCAGTAACTTTGATGATCTCGTTGATGATGTCTCTAATCATTATT 400
| ||||||||||| ||| || ||||||||||| ||| | || |||||| |||||| |
Sbjct 225 AT-TAAATGGTTACGTCAAAAAGTTTGATGATCTTGTTCAAGACGTCTCTTCTCATTACT 283
Query 401 CTACAATTTGTGAGAAGGAAGAGAACAAGGGGAAGATGAGGTTCCTACTCGGAGAATCCA 460
|| ||||||| ||| ||||||||| ||||||||||||||||| ||| | ||||||||||
Sbjct 284 CTTCAATTTGCGAGTTGGAAGAGAATAAGGGGAAGATGAGGTTTCTAATGGGAGAATCCA 343
Query 461 TGGGAGGAGCAGTTGTGTTGCTCTTAGCCAGAAAGAAGCCTGATTTTTGGGACGGTGCCG 520
||||||||||||||||||| ||||| | ||||||||||| ||||||||||||||||||
Sbjct 344 TGGGAGGAGCAGTTGTGTTACTCTTGGAGAGAAAGAAGCCCAATTTTTGGGACGGTGCCG 403
Query 521 TTTTGGTCGCACCCATGTGTAAGTTAGCAGACGAGATAAAGCCACATCCAGTAGTGATCT 580
|||| ||||| |||||||||||||||||||| || ||||||||||||||| | |||||||
Sbjct 404 TTTTAGTCGCTCCCATGTGTAAGTTAGCAGAAGACATAAAGCCACATCCAATGGTGATCT 463
Query 581 CAATCCTTATTAAA-CTTGC-CAAGTTTATTCCGACGTGGAAAATAGTTCC-AGGAAATG 637
|| | || | ||| || | | ||||||||| || ||||| |||||||| || || |
Sbjct 464 CATTTCTCAC-AAAGCTAACTCG-GTTTATTCCAACTTGGAAGATAGTTCCTAGCAAC-G 520
Query 638 ATATTATTGACATTGCAATTAAAGAA-CCTCACATCAGAAATCAGGTGAGGGAGAACAAG 696
||||||||||| | ||| |||||||| || ||||| ||||| ||||| ||||| || ||
Sbjct 521 ATATTATTGACGTAGCATTTAAAGAAACC-CACATAAGAAAACAGGTAAGGGACAATGAG 579
Query 697 TATTGCTATAAAGGCCGGCCTCGCCTCAACACCGC-CTACCAACTCTTGTTGGTTAGCTT 755
|||||||| || ||||| |||||| | || ||||| | ||||||| || ||||||||||
Sbjct 580 TATTGCTACAAGGGCCGTCCTCGCTTGAAAACCGCTC-ACCAACTTTTAATGGTTAGCTT 638
Query 756 AGATCTTGAGAAGAATCTTGACCAGGTATCAATTCC-TTTCATTGTTCTTCACGGAGAAG 814
|||||||||||||||||||| |||||||| || || ||| ||||| |||||||| ||||
Sbjct 639 GGATCTTGAGAAGAATCTTGATCAGGTATCGATGCCATTT-ATTGTCCTTCACGGTGAAG 697
Query 815 ATGATAAAGTGACGGACAAAAGCATAAGCAAAATGTTATACGAAGTGGCTTCAACCTCGG 874
|||||||||| || ||||||| | |||||||| | |||||||| || ||||||| ||||
Sbjct 698 ATGATAAAGTTACAGACAAAAACGTAAGCAAACTATTATACGAGGTAGCTTCAAGTTCGG 757
Query 875 ACAAGACATTCAAGTTGTACCCCAAAATGTGGCATGCGTTGTTATATGGAGAAACTTCTG 934
||||||| || ||||| ||||| || |||||||||| | | ||||| |||||| || |||
Sbjct 758 ACAAGACTTTTAAGTTATACCCGAACATGTGGCATGGGCTCTTATACGGAGAATCTCCTG 817
Query 935 AAAATTCAGAAATTGTGTTTGGTGATATCATAAACTGGCTGGAGGATAGAGC 986
| |||| || ||||||||| |||||||||||| |||| | |||| |||||
Sbjct 818 AGAATTTGGAGATTGTGTTTAGTGATATCATAAGCTGGTTAAAGGAGAGAGC 869
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 57379222935
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5