BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg482986 Length=1767 Score E Sequences producing significant alignments: (Bits) Value AT2G39660.1 | Symbols: BIK1 | botrytis-induced kinase1 | chr2:1... 2612 0.0 AT3G55450.2 | Symbols: PBL1 | PBS1-like 1 | chr3:20558102-20560... 741 0.0 AT3G01300.1 | Symbols: | Protein kinase superfamily protein | ... 76.8 6e-13 > AT2G39660.1 | Symbols: BIK1 | botrytis-induced kinase1 | chr2:16531688-16533931 FORWARD LENGTH=1773 Length=1773 Score = 2612 bits (1414), Expect = 0.0 Identities = 1669/1787 (93%), Gaps = 37/1787 (2%) Strand=Plus/Plus Query 1 CTTCTTCTTCTTCTGGTCACCCCTCGTGCCTCTCATTAACACCAAACCCAAAACActtcc 60 ||||| |||||||| ||||||||||||||||||| |||||||||||||| ||| ||| || Sbjct 1 CTTCTCCTTCTTCTAGTCACCCCTCGTGCCTCTCTTTAACACCAAACCC-AAA-ACTCCC 58 Query 61 ttctctttcttctttccgctctgatctctgttcaca----tctctcatctttatctcctt 116 |||||||||||| |||| ||| |||||| ||||||| ||||||||||||| | ||| Sbjct 59 TTCTCTTTCTTCCTTCCTCTCCGATCTCCGTTCACATCTCTCTCTCATCTTTA--T-CTT 115 Query 117 tttttttttttGCCTTGTGGGTCCAAAGTTTCTATATTTCCTCTTTCTGTTCTGTTTACA 176 || |||||||||||||||||| ||||||||||||||| |||||||| ||||||||||| Sbjct 116 CTTCTTTTTTTGCCTTGTGGGTTGAAAGTTTCTATATTTTCTCTTTCTCTTCTGTTTACA 175 Query 177 TAATCCATATTCAGCTCAAGCAGCTGAAGAAGAACGATCAAGAACC-AAATATAAGAAAA 235 |||||||| |||||||||||||||||||||| |||||||||||||| ||| | ||||||| Sbjct 176 TAATCCATTTTCAGCTCAAGCAGCTGAAGAATAACGATCAAGAACCAAAAAAGAAGAAAA 235 Query 236 CGAATCTGTTCTTAGC--TGATGGGTTCCTGCTTCAGTTCTCGAGTCAAAGCCGACATCT 293 |||||||||||||||| |||||||||| ||||||||||||||||||||||| ||||||| Sbjct 236 CGAATCTGTTCTTAGCTTTGATGGGTTCTTGCTTCAGTTCTCGAGTCAAAGCAGACATCT 295 Query 294 TCCACAATGGTAAGAGCAGCGATCTTTACGGTCTAAGTCTCTCCAGTCGGAAATCGTCGT 353 |||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| | Sbjct 296 TCCACAATGGTAAGAGCAGCGATCTTTATGGTCTAAGTCTCTCAAGTCGGAAATCGTCTT 355 Query 354 CAACTGTAGCGGCGGCTCAGAAGACGGAAGGGGAGATATTGAGTTCGACCCCCGTCAAAA 413 | |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 356 CGACTGTAGCGGCGGCTCAGAAGACGGAAGGGGAGATATTGAGTTCGACCCCTGTCAAAA 415 Query 414 GCTTCACCTTTAACGAACTCAAACTCGCCACCAGAAACTTCAGACCAGATAGTGTGATCG 473 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 416 GCTTCACCTTTAACGAACTCAAACTCGCCACAAGAAACTTCAGACCAGATAGTGTGATCG 475 Query 474 GAGAAGGTGGCTTTGGTTGTGTCTTTAAAGGCTGGTTAGATGAGACCACTCTCACTCCGA 533 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 476 GAGAAGGTGGCTTTGGTTGTGTCTTTAAAGGCTGGTTAGATGAGTCCACTCTCACTCCGA 535 Query 534 CTAAACCTGGAACCGGTTTGGTTATCGCCGTTAAAAAGCTTAACCAAGAAGGTTTTCAAG 593 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 536 CTAAACCTGGAACCGGTTTGGTCATCGCCGTTAAAAAGCTTAACCAAGAAGGTTTTCAAG 595 Query 594 GTCACCGTGAATGGCTGACAGAGATCAATTACTTGGGGCAATTGAGTCACCCAAATCTAG 653 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 596 GTCACCGTGAATGGCTGACAGAGATCAATTACTTGGGGCAACTGAGTCACCCAAATCTAG 655 Query 654 TCAAACTAATCGGGTATTGCTTAGAGGATGAACACCGTCTTCTTGTCTACGAGTTTATGC 713 | ||||| ||||| ||||||||||| ||||||||||||||||| |||||||||||||||| Sbjct 656 TTAAACTGATCGGTTATTGCTTAGAAGATGAACACCGTCTTCTAGTCTACGAGTTTATGC 715 Query 714 AAAAAGGAAGTCTTGAGAATCATCTATTCAGAAGAGGTGCATATTTTAAGCCACTCCCAT 773 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 716 AAAAAGGAAGTCTTGAGAATCATCTATTCAGAAGAGGTGCATATTTTAAGCCACTCCCAT 775 Query 774 GGTTTTTACGGATCCAGGTTGCGCTTGATGCAGCAAAGGGTCTTGCTTTTCTTCACAGCG 833 ||||| ||||| || | ||||||||||||||||||||||| ||||||||||||||||||| Sbjct 776 GGTTTCTACGGGTCAATGTTGCGCTTGATGCAGCAAAGGGGCTTGCTTTTCTTCACAGCG 835 Query 834 ATCCCGTCAAAGTGATATACCGAGACATTAAAGCCTCGAACATCTTACTTGATTCGGACT 893 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 836 ATCCCGTCAAAGTGATATACCGAGACATTAAAGCCTCGAACATCTTACTTGATGCGGACT 895 Query 894 ACAACGCAAAACTTTCTGACTTTGGACTAGCTAGGGACGGTCCAATGGGTGATTTGAGCT 953 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| | Sbjct 896 ACAACGCAAAACTTTCTGACTTTGGACTAGCTAGAGACGGTCCAATGGGTGATTTGAGTT 955 Query 954 ATGTTAGTACAAGGGTCATGGGTACATATGGCTACGCCGCACCTGAGTACATGTCATCAG 1013 ||||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||||| Sbjct 956 ATGTTAGTACAAGGGTCATGGGTACTTATGGGTACGCCGCGCCTGAGTACATGTCATCAG 1015 Query 1014 GTCACTTGAATGCAAGAAGCGATGTGTACAGTTTCGGAGTATTGCTTCTAGAGATTTTAT 1073 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 1016 GTCACTTGAATGCAAGAAGCGATGTGTACAGTTTCGGAGTTTTGCTTCTAGAGATTTTAT 1075 Query 1074 CAGGTAAGCGAGCGTTGGATCATAACAGGCCGGCTAAAGAAGAAAACCTTGTGGATTGGG 1133 | |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 1076 CTGGTAAGCGAGCGTTGGATCATAACAGACCGGCTAAAGAAGAAAACCTTGTGGATTGGG 1135 Query 1134 CTCGACCATACCTCACAAGCAAACGCAAGGTTCTCCTAATCGTGGACACTCGGCTAGACA 1193 ||||||| ||||||||||||||||| |||||||||||||||||||||| ||||||||||| Sbjct 1136 CTCGACCGTACCTCACAAGCAAACGTAAGGTTCTCCTAATCGTGGACAATCGGCTAGACA 1195 Query 1194 CACAGTACTTACCTGAAGAAGCCGTGAGAGTGGCCAGCATTGCGGTGCAATGTCTCTCAT 1253 |||||||| |||||||||||||||||||| |||| ||| | |||||||| |||||||||| Sbjct 1196 CACAGTACCTACCTGAAGAAGCCGTGAGAATGGCAAGCGTGGCGGTGCAGTGTCTCTCAT 1255 Query 1254 TCGAACCCAAGTCGCGCCCGACCATGGACCAAGTGGTCCGTGCCTTGCAACAACTTCAGG 1313 | |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 1256 TTGAACCCAAGTCGCGCCCGACCATGGACCAAGTGGTCCGTGCCTTACAACAACTTCAGG 1315 Query 1314 ACAACTTGGGAAAACCGAGTCAGACCAATCCGGTTAAGGATACCAAGAAACTTGGTTTTA 1373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1316 ACAACTTGGGAAAACCGAGTCAGACCAATCCGGTTAAGGATACCAAGAAACTTGGTTTTA 1375 Query 1374 AAACTGGTACTA--A-GTCATCCGAAAAACGGTTTACACAAAAACCTTTTGGCAGGCACC 1430 |||||||||||| | |||||||||||||||||||||||||||||||||||||||||||| Sbjct 1376 AAACTGGTACTACTAAGTCATCCGAAAAACGGTTTACACAAAAACCTTTTGGCAGGCACC 1435 Query 1431 TTGTGTAGGTCAAGCTGGTAATTGAGTTCCAGGATGGGCATTTTTTCGGCGAGT--ACTT 1488 |||||||||||||| || ||| ||| ||||||||||| ||||||| ||||| || |||| Sbjct 1436 TTGTGTAGGTCAAGTTGATAACTGAATTCCAGGATGGACATTTTTCCGGCG-GTTTACTT 1494 Query 1489 GAAACTGCGGAGATCCGTTTTCCACGGATTG--T----T-CAGGACAAACCGTGCAGGTC 1541 |||||||| || |||||||||| |||||||| | | | |||||||||||||||||| Sbjct 1495 GAAACTGCCGATATCCGTTTTCGACGGATTGAATGCGGTTCTGGACAAACCGTGCAGGTC 1554 Query 1542 GAGACTGATAATGGATACGTCAAATATTCCGGTTACATGTCCCATACCCACAACCTTAGA 1601 ||||| |||| |||||| | |||| |||||||||||||||||||||||| | ||||||| Sbjct 1555 AAGACTAATAAAGGATACATTAAATTTTCCGGTTACATGTCCCATACCCA-A-CCTTAGA 1612 Query 1602 GAACATGTTTAGCCTTTAGGTTAGGCTTCCTTGTGTGCTGTTATATTGAGTGAAGTATAT 1661 |||||||| |||||||||| ||||||||||||||||||||||||||||||| | ||||| Sbjct 1613 GAACATGTGTAGCCTTTAGCTTAGGCTTCCTTGTGTGCTGTTATATTGAGT-A--TATAT 1669 Query 1662 AACTGAGGTATTTTTTACCTCTTCTGTTGTAACACTCTTGTATTTTTGTTCCTTTAACAT 1721 |||||| ||||| |||||| |||||||||||| | ||||||||||||||||||||| Sbjct 1670 ----GAGGTAATTTTTGCCTCTTGTGTTGTAACACT-T-GTATTTTTGTTCCTTTAACAT 1723 Query 1722 TTGATGTAGAGATTTT-CCTATATCTTCAGTTTTGAAATCCAAATTT 1767 |||||||||||||||| ||||||||||||||||||||| |||||||| Sbjct 1724 TTGATGTAGAGATTTTTCCTATATCTTCAGTTTTGAAACCCAAATTT 1770 > AT3G55450.2 | Symbols: PBL1 | PBS1-like 1 | chr3:20558102-20560096 FORWARD LENGTH=1441 Length=1441 Score = 741 bits (401), Expect = 0.0 Identities = 860/1077 (80%), Gaps = 49/1077 (5%) Strand=Plus/Plus Query 368 GCTCAGAAGACGGAAGGGGAGAT-ATTGAGTTCGACCCCCGTCAAAAGCTTCACCTTTAA 426 ||||| ||||| ||||| || || || || || || ||||||||||||| | |||||| Sbjct 235 GCTCATAAGACAGAAGGAGAAATCCTT-AGCTCAACGACCGTCAAAAGCTTTAGCTTTAA 293 Query 427 CGAACTCAAACTCGCCACCAGAAACTTCAGACCAGA-TAGTG-TGATCGGAGAAGGTGGC 484 ||||| |||||||| || |||||||||||| | || | || || | |||||||||||| Sbjct 294 TGAACTTAAACTCGCTACTAGAAACTTCAGATCGGACT-CTGTTG-TTGGAGAAGGTGGC 351 Query 485 TTTGGTTGTGTCTTTAAAGGCTGG-TTAGATGAGACCACTCTCACTCCGACTAAACCTGG 543 |||||||||||||||| ||| ||| || |||||||| ||||| ||||| || ||| || | Sbjct 352 TTTGGTTGTGTCTTTAGAGGTTGGCTT-GATGAGACTACTCTTACTCCTACCAAATCTAG 410 Query 544 AACCGGT-TTGGTTATCGCCGTTAAAAAG-CTTAACCAAGAAGGTTTTCAAGGTCACCGT 601 | ||| || ||||| || ||| ||| | ||||||| || ||||||||||||||||| Sbjct 411 CTCTGGTCTT-GTTATTGCTGTT-AAACGACTTAACCCTGATGGTTTTCAAGGTCACCGA 468 Query 602 GAATGGCTGACAGAGATCAATTACTTGGGGCAATTGAGTCACCCAAATCTAGTCAAACTA 661 ||||||||||||||||| || || |||||||| || |||||||| ||| | || ||| | Sbjct 469 GAATGGCTGACAGAGATTAACTATTTGGGGCAGTTAAGTCACCCGAATTTGGTTAAATTG 528 Query 662 ATCGGGTATTGCTTAGAGGATGAACACCGTCTTCTTGTCTACGAGTTTATGCAAAAAGGA 721 || || |||||||| || |||||||| || |||||||| || ||||||||||| || || Sbjct 529 ATTGGTTATTGCTTGGAAGATGAACAACGGCTTCTTGTGTATGAGTTTATGCACAAGGGT 588 Query 722 AGTCTTGAGAATCATCT-ATT-CAGAA--GAGGTGCA-TATTTTAAGCCACTCCCATGGT 776 ||||||||||||||||| || || || || | | |||||||||| || | ||| Sbjct 589 AGTCTTGAGAATCATCTGTTTGCA-AATGGAAAT-AAGGATTTTAAGCCGCTATCTTGGA 646 Query 777 TTTTACGGATCCAGGTTGCGCTTGATGCAGC-AAAGGGTCTTGCTTTTCTTCACAGCGAT 835 || ||||||| ||||||| ||||||||||| ||| |||||||| |||||||| || ||| Sbjct 647 TTCTACGGATTAAGGTTGCACTTGATGCAGCTAAA-GGTCTTGCATTTCTTCATAGTGAT 705 Query 836 CCCGTCAAAGTGATATACCGAGACATTAAAGCCTCGAACATCTTACTTGATTCGGACTAC 895 ||||||||||| || ||| ||||||| || || || ||||||||||| || ||||||| | Sbjct 706 CCCGTCAAAGTCATTTACAGAGACATCAAGGCGTCAAACATCTTACTGGACTCGGACTTC 765 Query 896 AACGCAAAACTTTCTGACTTTGGACTAGCTAGGGACGGTCCAATGGGTGATTTGAGCTAT 955 |||||||| ||||| |||||||| |||| || |||||||||||||| || || ||| Sbjct 766 AACGCAAAGCTTTCAGACTTTGGTTTAGCGAGAGACGGTCCAATGGGAGAACAAAGTTAT 825 Query 956 GTTAGTACAAGGGTCATGGGTACATATGGCTACGCCGCACCTGAGTACATGTCATCAGGT 1015 ||||||||||||||||||||||| | ||| ||||| || |||||||| | ||| |||| Sbjct 826 GTTAGTACAAGGGTCATGGGTACTTTTGGGTACGCAGCTCCTGAGTATGTCTCAACAGGC 885 Query 1016 CACTTGAATGCAAGAAGCGATGTGTACAGTTTCGGAG-TATTGCTTCTAGAGA-TTTTAT 1073 ||||| ||||| |||||||| || ||||||||||| | | || || ||||| | | ||| Sbjct 886 CACTTAAATGCTAGAAGCGACGTATACAGTTTCGGGGTTGTT-CTGCTAGA-ACTACTAT 943 Query 1074 CAGGTAA-GCGAGCGTTGGATCATAACAGGCCGGCTAAAGAAG-AAAACCTTGTGGATTG 1131 || || || ||| | || |||||| | ||||| ||| || |||||||||||||||| Sbjct 944 GTGG-AAGGCAAGCACTAGACCATAACCGCCCGGC-CAAGGAGCAAAACCTTGTGGATTG 1001 Query 1132 GGCTCGACCATACCTCACAAGCAAACGCAAGGTTCTCCTAATCGTGGACACTCGGCT-AG 1190 ||||||||||||||||||||||| || |||||||| ||||| |||||||||||||| | Sbjct 1002 GGCTCGACCATACCTCACAAGCAGGCGAAAGGTTCTACTAATTGTGGACACTCGGCTTA- 1060 Query 1191 ACACACAGTACTTACCTGAAGAAGCCGTGAGAGTGGCCAGCATTGCGGTGCAATGTCTCT 1250 || |||||||| ||| |||| ||| |||||| |||| |||||||| |||||||| || | Sbjct 1061 ACTCACAGTACAAACCCGAAGGAGCAGTGAGACTGGCAAGCATTGCTGTGCAATGCCTAT 1120 Query 1251 CATTCGAACCCAAGTCGCGCCCGACCATGGACCAAGTGGTCCGTGCCTTGCAACAACTTC 1310 ||||||||||||| || || |||||||||||||||||||| || |||||| ||| || | Sbjct 1121 CATTCGAACCCAAATCACGTCCGACCATGGACCAAGTGGTTCGAGCCTTGGTACAGCTGC 1180 Query 1311 AGGACAACTTGGGAAAACCGAGTCA--G---ACCAA-TCC-GGTTAAGGATACCAAGAAA 1363 | |||| | ||| |||||| | || | ||| | ||||||||||||||||||| Sbjct 1181 AAGACAGCGTGGTTAAACCG-GCCAATGTTGACCCGCTTAAGGTTAAGGATACCAAGAAA 1239 Query 1364 CTTG-GTT-TT-AAAACTG--GTACTAAGTCATCC-GAAAAACGGTTTACACAAAAA 1414 |||| | || ||||| | | || |||| | || || |||||||||| ||||||| Sbjct 1240 CTTGTGGGATTGAAAACAGAAG-AC-AAGT-A-CCAGAGAAACGGTTTAAACAAAAA 1292 > AT3G01300.1 | Symbols: | Protein kinase superfamily protein | chr3:90598-93585 REVERSE LENGTH=1942 Length=1942 Score = 76.8 bits (41), Expect = 6e-13 Identities = 231/318 (73%), Gaps = 32/318 (10%) Strand=Plus/Plus Query 446 AGAAACTTCAGACCAGATAGTGTGATCGGAGAAGGTGGCTTTGGTTGTGTCTTTAAAGGC 505 ||||| |||||||| || || | |||||||||||||||||||||||||||| |||||| Sbjct 650 AGAAATTTCAGACCTGAAAGCCTTCTCGGAGAAGGTGGCTTTGGTTGTGTCTTCAAAGGC 709 Query 506 TGGTTAGATGAGACC--A-CT-CTCACTCCGACTAAACCTGGAACCGGT-TTGGT-TATC 559 ||| | || |||| | | || ||| || | ||| ||||| || || || | | | Sbjct 710 TGGGTCGAGGAGAACGGAACTGCTC-CT--GT-TAAGCCTGGCACTGGCCTTACTGT-T- 763 Query 560 GCCGTTAAAAAGCTTAA--CCAAGAAGGTTTTCAAGGTCACCGTGAATGGCT-GACAGAG 616 ||||| |||| ||||| || || || |||| ||||| || ||||| | | ||| Sbjct 764 GCCGTCAAAAC-CTTAAATCCT-GATGGCCTTCAGGGTCATAAAGAGTGGCTTG-CTGAG 820 Query 617 ATCAATTA-CTTGGGGCAAT-TGAGTC-A-CCCAAATCTAGTCAAACTAATCGGGT-ATT 671 || ||||| ||||| ||| | || | ||||| ||| || ||||| | |||| ||| Sbjct 821 ATTAATTATCTTGGT--AATCTTC-TCCATCCCAA-TCTTGTTAAACTGGT-GGGTTATT 875 Query 672 GCT-TAGAGGATGAACACCGTCTTCTTGTCTACGAGTTTATGCAAAAAGGAAGTCTTG-A 729 | | | || ||||| || | || ||||| || |||||||||| ||||||| ||| | Sbjct 876 G-TATCGAAGATGATCAAAGGCTGCTTGTATATGAGTTTATGCCTCGAGGAAGT-TTGGA 933 Query 730 GAATCATCTATTCAGAAG 747 |||||| || |||||||| Sbjct 934 GAATCACCTTTTCAGAAG 951 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 87399148845 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5