BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg482993 Length=1451 Score E Sequences producing significant alignments: (Bits) Value AT2G39710.1 | Symbols: | Eukaryotic aspartyl protease family p... 2030 0.0 > AT2G39710.1 | Symbols: | Eukaryotic aspartyl protease family protein | chr2:16561788-16563380 REVERSE LENGTH=1593 Length=1593 Score = 2030 bits (1099), Expect = 0.0 Identities = 1301/1399 (93%), Gaps = 11/1399 (1%) Strand=Plus/Plus Query 10 TCATCATCATCTCTTTC-AAATTTGTTTCTTCGAATCTCAATTCTACTTCTCATTTTCCC 68 ||||||| ||||||||| ||| | ||||||||||||||| |||||||||| |||||||| Sbjct 23 TCATCATTATCTCTTTCAAAAAAT-TTTCTTCGAATCTCAGTTCTACTTCTTATTTTCCC 81 Query 69 TCTCACGTTATGCAAAACATCTTCTTCAGATCAAACACTACTCTTCTCTCTCAAAACACA 128 ||| ||||| ||||||||||||||| || ||||||||||||||||||||||||||||||| Sbjct 82 TCTAACGTTCTGCAAAACATCTTCTACAAATCAAACACTACTCTTCTCTCTCAAAACACA 141 Query 129 GAAACTTCCTCAGTCTTCTTCAGACAAGCTTTCATTCAGACACAATGTTACTCTCACGGT 188 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 142 GAAACTTCCTCAGTCTTCTTCAGACAAGCTTTCATTCAGACACAATGTTACTCTCACCGT 201 Query 189 CACTCTCGCCGTCGGCTCTCCACCGCAAAATATCTCGATGGTTCTTGATACCGGAAGCGA 248 |||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| Sbjct 202 CACTCTCGCCGTCGGCGATCCACCTCAAAATATCTCGATGGTTCTTGATACCGGAAGCGA 261 Query 249 GCTTTCATGGCTTCACTGCAAGAAATCTCCAAACTTAGGATCCGTTTTTAACCCGGTTTC 308 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 262 GCTCTCATGGCTTCACTGCAAGAAATCTCCAAACTTAGGATCCGTTTTTAACCCGGTTTC 321 Query 309 ATCCTCTACGTACTCTCCAGTACCTTGCTCCTCACCAATTTGCAGGACCCGGACCCGGGA 368 ||||||||||||||| || || ||||||||||||||||||||||||||||| |||||||| Sbjct 322 ATCCTCTACGTACTCCCCTGTGCCTTGCTCCTCACCAATTTGCAGGACCCGTACCCGGGA 381 Query 369 TTTACCCATACCCGCTTCATGCGATCCGAAGACCCATCTCTGTCACGTGGCAATCTCTTA 428 |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| || Sbjct 382 TTTACCCATACCCGCTTCATGCGATCCGAAGACCCATCTCTGCCACGTGGCTATCTCCTA 441 Query 429 CTCTGACGCTACCTCAATTGAAGGTAACTTAGCTCACGACACGTTCGTAATCGGGTCTGT 488 | |||||||||| ||||| ||||| ||||| ||||| || |||||||||||||||||||| Sbjct 442 CGCTGACGCTACATCAATCGAAGGCAACTTGGCTCATGAGACGTTCGTAATCGGGTCTGT 501 Query 489 GACCCGACCCGGTACCTTATTCGGGTGTATGGACTCAGGTTTAAGCTCTGATTCGGAGGA 548 ||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||| Sbjct 502 GACCCGACCCGGTACTTTATTCGGGTGTATGGACTCAGGTTTAAGCTCCAATTCGGAGGA 561 Query 549 AGACGCTAAATCGACCGGTTTAATGGGAATGAACCGGGGATCTTTATCTTTTGTTAACCA 608 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 562 AGATGCTAAATCGACCGGTTTAATGGGAATGAACCGGGGATCTTTATCTTTTGTTAACCA 621 Query 609 GCTAGGTTTCTCAAAATTCTCGTATTGCATCTCCGGTTCAGATTCCTCCGGTATTTTGCT 668 ||| |||||||||||||| ||||||||||| ||||||||||||||||||||| ||||||| Sbjct 622 GCTGGGTTTCTCAAAATTTTCGTATTGCATATCCGGTTCAGATTCCTCCGGTTTTTTGCT 681 Query 669 TCTCGGTGACGCGTCTTATTCCTGGCTCGGTCCAATCCAATACACGCCTTTGGTTCTCCA 728 ||||||||||||||| || ||||||||||||||||||||||| |||||| ||||||| || Sbjct 682 TCTCGGTGACGCGTCCTACTCCTGGCTCGGTCCAATCCAATATACGCCTCTGGTTCTACA 741 Query 729 AACGACACCATTACCGTATTTCGACCGGGTTGCTTACACGGTCCAATTAGAAGGAATCCG 788 | |||| || ||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 742 ATCGACGCCGTTACCTTATTTCGACCGGGTTGCTTACACGGTCCAATTAGAAGGAATCCG 801 Query 789 GGTTGGGTCAAAGATACTTTCTTTACCGAAATCCGTATTCGTACCGGACCATACCGGAGC 848 ||| ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| Sbjct 802 GGTCGGGTCAAAGATACTTTCTTTACCGAAATCTGTATTCGTACCGGATCATACCGGAGC 861 Query 849 CGGTCAGACCATGGTGGATTCAGGTACACAATTTACGTTCCTAATGGGTCCGGTTTACAC 908 |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 862 AGGTCAGACGATGGTGGATTCAGGTACCCAATTTACGTTCCTAATGGGTCCGGTTTACAC 921 Query 909 TGCCTTAAAAAACGAGTTTATCGCGCAAACCAAATCGGTTCTCAGAATAGTAGACGACCC 968 ||||||||||||||||||||| |||||||||||||||||||||| | ||||||||||| Sbjct 922 TGCCTTAAAAAACGAGTTTATTACGCAAACCAAATCGGTTCTCAGGCTTGTAGACGACCC 981 Query 969 GAATTTTGTGTTCCAAGGGACAATGGACCTATGTTACCGGGTTGGATCGTCAACCCGGCC 1028 | |||| ||||||||||||||||||||||| |||||| |||||| || | || ||||| Sbjct 982 GGATTTCGTGTTCCAAGGGACAATGGACCTTTGTTACAAGGTTGGGTCAACGACACGGCC 1041 Query 1029 CAATTTCACAGGTTTACCCGTGATTAGTTTAATGTTCCGTGGCGCGGAGATGAGTGTGTC 1088 ||||||| | ||||||||| || ||||||||||||||||||||||||||||||||||||| Sbjct 1042 CAATTTCTCGGGTTTACCCATGGTTAGTTTAATGTTCCGTGGCGCGGAGATGAGTGTGTC 1101 Query 1089 GGGTCAGAAACTGTTGTACCGGGTAAACGGAGCCGGGTCGGAAGGAAAAGAGGAAGTGTA 1148 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || Sbjct 1102 GGGTCAGAAACTGTTGTACCGGGTAAACGGAGCCGGGTCGGAAGGAAAAGAAGAAGTATA 1161 Query 1149 TTGCTTCACATTTGGAAACTCTGATCTTTTGGGAATAGAAGCATTTGTTATAGGTCACCA 1208 ||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct 1162 TTGCTTCACGTTTGGGAACTCTGATCTTTTGGGGATAGAAGCATTTGTTATAGGTCACCA 1221 Query 1209 TCATCAGCAAAACGTGTGGATGGAGTTTGATTTAGCTAAATCAAGGGTTGGTTTTGCTGG 1268 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 1222 TCATCAGCAAAACGTGTGGATGGAGTTTGATTTAGCTAAATCAAGGGTTGGTTTCGCTGG 1281 Query 1269 TAACGTTAGATGTGATCTAGCTAGTCAACGGCTCGGATTAAGAGATTGATAGGACTTGTT 1328 |||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 1282 TAACGTCAGATGTGATTTAGCTAGTCAACGGCTCGGATTAAGAGATTGATAGGACTTGTT 1341 Query 1329 TAAGTC----GTAT-GTG-GAAA-ATGAGAATATTTTCTAGACCAA--ATACATTTATAT 1379 |||||| || | ||| | | |||||||||| |||||||||| |||| ||| ||| Sbjct 1342 TAAGTCTTCTGTGTCGTGTGTGACATGAGAATATCTTCTAGACCATTGATACGTTTTTAT 1401 Query 1380 AGTTTTGTAAGGATAGCtt 1398 |||||||| || ||||||| Sbjct 1402 AGTTTTGTGAGTATAGCTT 1420 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 71535776625 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5