BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg483087 Length=1059 Score E Sequences producing significant alignments: (Bits) Value AT2G40330.1 | Symbols: PYL6, RCAR9 | PYR1-like 6 | chr2:1684486... 1531 0.0 > AT2G40330.1 | Symbols: PYL6, RCAR9 | PYR1-like 6 | chr2:16844864-16845934 REVERSE LENGTH=1071 Length=1071 Score = 1531 bits (829), Expect = 0.0 Identities = 973/1040 (94%), Gaps = 20/1040 (2%) Strand=Plus/Plus Query 1 TACATGTAAATATCTCTCATTAATACAACATTACAACCTCACGAAGAAACCCATTTGTTT 60 ||||||||||||||||||| | | | | |||||||||||||||||| |||||||||| Sbjct 3 TACATGTAAATATCTCTCA-T--T---A-A-TACAACCTCACGAAGAAAACCATTTGTTT 54 Query 61 TCTTAGAGAGAGCCAAGAATATTAAAGGAGATATCGAAAAAAGACTTGCTTTAAAAATGC 120 |||||||||||||||||||||||||| ||||||| || |||||| ||||||||| ||||| Sbjct 55 TCTTAGAGAGAGCCAAGAATATTAAAAGAGATATAGAGAAAAGATTTGCTTTAATAATGC 114 Query 121 CATCGTCGATACAGTTTCAGAGATCCTCCACCGCCGCAGAAGCAGCCAACCCCACCGTAA 180 || ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 115 CAACGTCGATACAGTTTCAGAGATCCTCCACCGCCGCAGAAGCAGCCAACGCCACCGTAA 174 Query 181 GAAACTATCACCACCACCA-CAACAAACAGGTTCAAAAAGTGAGCCTCACGCGCGGGATG 239 ||||||||| ||||||||| | | |||||||||||||||||||||||||||||||||||| Sbjct 175 GAAACTATCCCCACCACCATC-AGAAACAGGTTCAAAAAGTGAGCCTCACGCGCGGGATG 233 Query 240 GCTGATGTACCGGAGCACGTGGAGCTTTCTCACACGCACGTGGTTGGTCCTTCTCAGTGC 299 |||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 234 GCTGATGTGCCGGAGCACGTGGAGCTTTCCCACACGCACGTGGTTGGTCCTTCTCAGTGC 293 Query 300 TTCTCCGTCGTGGTGCAAGACGTGGAGGCTCCGGCTTCCGCCGTCTGGTCGATCCTAAGC 359 |||||||||||||| ||||||||||||||||||| |||| | |||||||||||||||||| Sbjct 294 TTCTCCGTCGTGGTACAAGACGTGGAGGCTCCGGTTTCCACAGTCTGGTCGATCCTAAGC 353 Query 360 CGCTTCGAACACCCTCAAGCGTACAAACACTTCGTGAAAAGCTGCCACGTGGCTATCGGA 419 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 354 CGCTTCGAACACCCTCAAGCGTACAAACACTTCGTGAAAAGCTGCCACGTGGTTATCGGA 413 Query 420 GACGGTCGAGAGATTGGGTCGGTGAGGGAGGTCCGAGTCGTCTCTGGTCTCCCTGCGGCG 479 |||||||||||| ||||||||||||| |||||| ||||||||||||||||||| |||||| Sbjct 414 GACGGTCGAGAGGTTGGGTCGGTGAGAGAGGTCAGAGTCGTCTCTGGTCTCCCCGCGGCG 473 Query 480 TTTAGCTTAGAGCGGCTTGAGATCATGGATGATGAACGCCACGTCATCAGTTTCAGCGTC 539 ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||| Sbjct 474 TTTAGCTTAGAGCGGCTTGAGATCATGGACGATGATCGCCACGTCATCAGTTTCAGCGTC 533 Query 540 GTGGGTGGGGACCACAGACTTATGAACTACAAGTCGGTAACGACGGTGCATGAGTCGGAG 599 || ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| Sbjct 534 GTTGGTGGGGACCACAGACTCATGAACTACAAGTCGGTGACGACGGTGCATGAGTCGGAG 593 Query 600 TCA-TCCGACGACGGTAAGAAGAGGACACGTGTCGTCGAGTCATACGTCGTTGACGTACC 658 | | |||||| |||||||||||||||||||| ||||||||||||||||||||||| Sbjct 594 -GAGGACTCCGACGGCAAGAAGAGGACACGTGTCGTTGAGTCATACGTCGTTGACGTACC 652 Query 659 GGCGGGTAACGATAAGGAAGAGACTTGTAGCTTCGCGGATACCATTGTACGGTGCAACTT 718 ||||||||||||||||||||||||||||||||| || ||||| || |||||||||||||| Sbjct 653 GGCGGGTAACGATAAGGAAGAGACTTGTAGCTTTGCTGATACTATAGTACGGTGCAACTT 712 Query 719 GCAATCGCTGGCTAAACTCGCCGAGAACACGTCTAAATTCTCGTAATTACatttttttca 778 |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| Sbjct 713 GCAATCGCTGGCTAAACTCGCCGAGAACACTTCTAAATTCTCGTAATTACA-TTTTTTCA 771 Query 779 atctttttatttttattatattttctat-tttctctctttcaaaatttatcttttatttt 837 ||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||| Sbjct 772 ATCTTTTTATTTTTATTTTATTTTCTATATTTCTCTCTTTCAAAATTTATCTTTTATTTT 831 Query 838 tGGGATTCTCGAGGTGGTTTTGGATTTTAAGATTTAAGTATTTAACAATCAATCGTAGGC 897 |||||||||||||||||||||||||||||||||||||||||||||| ||| ||| || Sbjct 832 TGGGATTCTCGAGGTGGTTTTGGATTTTAAGATTTAAGTATTTAACTATCG-TCG--GG- 887 Query 898 GATTTT-CGAAACTaaaaaaaaaaaaaaaaaTTAGAA-AAACAAGATGGTTTTGGTTTTT 955 |||||| ||||||||||| |||||| || ||||| | |||||||||||||||||||||| Sbjct 888 GATTTTTCGAAACTAAAACAAAAAACAAGAATTATATCAAACAAGATGGTTTTGGTTTTT 947 Query 956 CGAAGTTAGGGTTTTTAGGGTCTGTTAAATGTATGTCTCAACGATACTTTGGGTTTACCC 1015 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 948 CGAAGTTAGGGTTTTTAGGGTCTGTTAAATGTATGTCTCAACGATACTTTGGTTTTACCC 1007 Query 1016 TTAAAACCATTTCTTCTTGT 1035 |||||||||||||||||||| Sbjct 1008 TTAAAACCATTTCTTCTTGT 1027 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 51857162985 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5