BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg483117 Length=827 Score E Sequences producing significant alignments: (Bits) Value AT2G40600.1 | Symbols: | appr-1-p processing enzyme family pro... 1033 0.0 > AT2G40600.1 | Symbols: | appr-1-p processing enzyme family protein | chr2:16946870-16948561 REVERSE LENGTH=940 Length=940 Score = 1033 bits (559), Expect = 0.0 Identities = 718/792 (91%), Gaps = 21/792 (3%) Strand=Plus/Plus Query 1 ACGACTCAAATGAGACGACTATGGTTGACCTGTGGAGTCTTGAGTCTCCTCCCTAGATTA 60 ||||||||||||||||||| ||||||||||| |||| ||| ||| | |||||| ||||| Sbjct 16 ACGACTCAAATGAGACGACAATGGTTGACCTCTGGACTCTCGAG--T-CTCCCTGGATTA 72 Query 61 CTTCACTCGAGCT---CGATCCTTAGACCAACTTCG---TCTTCCTCGAGAGCTTCTCTG 114 || |||||||||| |||||||||||||||||||| ||||||||||||||||||||| Sbjct 73 CTACACTCGAGCTCGACGATCCTTAGACCAACTTCGTCTTCTTCCTCGAGAGCTTCTCTG 132 Query 115 AGCTCCGCCACCTCCTTCGTCGCTTCTTCTTCG-TCTAC-TCTCTCTTC-TCCTACGAGG 171 | |||| | | | || | ||| | || || | ||| ||||| | |||| Sbjct 133 ATCTCCTTC-GC-CGTTAATAATTTCCAC-ACGATC-GCTTCT-TCTTCGT-CTACTCTC 186 Query 172 ACTTCTCGCTTGACAACTGTATCA---TCCATGGCTTCTAAAGACGAAGGAGCTGTTTTT 228 ||||||||||||||||||||||| |||||||||||| ||||||||||||||||| Sbjct 187 TCTTCTCGCTTGACAACTGTATCATCGTCCATGGCTTCTGGTGACGAAGGAGCTGTTTTC 246 Query 229 AATTTGTCAGATTCTAGCCTTCTTAAGATTCTTAAAGGAGACATCACCAAGTGGTCCGTT 288 |||||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||| Sbjct 247 AATTTGTCTGATTCTAGCCTTCTTAAGATCCTTAAAGGAGACATCACCAAGTGGTCTGTT 306 Query 289 GATTCCTCCTCCGATGCTGTTGTCACTCCAGCAAATGAGCGTATGTTAGGTGGTGGTGGT 348 ||||| |||||||||||| |||||| |||||||||||||||||||||||||||||||||| Sbjct 307 GATTCTTCCTCCGATGCTATTGTCAATCCAGCAAATGAGCGTATGTTAGGTGGTGGTGGT 366 Query 349 GCTGATGGAGCAATACATAGAGCTGCTGGGCCACAACTCAGAGCTGCATGCTATGAGGTT 408 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 367 GCTGATGGAGCAATACATAGAGCTGCTGGGCCACAACTCAGAGCTGCATGCTATGAGGTT 426 Query 409 CCTGAAGTTCGTCCTGGAGTCCGTTGTCCAACCGGAGAAGCAAGAGTTACTCCGGGTTTT 468 |||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| Sbjct 427 CCTGAAGTTCGTCCTGGAGTCCGTTGTCCAACTGGAGAAGCAAGAATTACTCCGGGTTTT 486 Query 469 AACTTGCCTGCATCGCGTGTGATTCACACTGTTGGACCGATCTATGACTCTGATGTCAAC 528 |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| Sbjct 487 AACTTGCCTGCATCGCGTGTGATTCACACTGTTGGACCTATCTATGACTCAGATGTCAAC 546 Query 529 CCTCAAGAATCCCTCACAAATGCTTACAAAAATAGTCTGAGAGTTGCAAAGGAAAACAAC 588 ||||||||||| ||||| ||| | ||||||||||||||||||||||||||||||||||| Sbjct 547 CCTCAAGAATCTCTCACCAATTCGTACAAAAATAGTCTGAGAGTTGCAAAGGAAAACAAT 606 Query 589 ATCAAATACATTGCATTTCCTGCCATATCTTGTGGGATTTACGGATATCCTTTTGATGAA 648 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 607 ATCAAATACATTGCATTTCCTGCCATATCTTGTGGGATTTACGGATATCCTTTTGATGAA 666 Query 649 GCTGCTGCGATCGGTATATCAACCATCAAACAGTTCTCTAATGACTTTAAAGAGGTACAT 708 ||||||||||| ||||| |||||||||||||| ||||||| ||||||||||||||| ||| Sbjct 667 GCTGCTGCGATAGGTATTTCAACCATCAAACAATTCTCTACTGACTTTAAAGAGGTGCAT 726 Query 709 TTTGTTTTGTTCGCTGACGATATATTCAGTGTGTGGGTAAACAAAGCAAAGGAGGTGCTA 768 |||||||||||||| ||||| |||||||| || ||||||||||||||||||||||||||| Sbjct 727 TTTGTTTTGTTCGCGGACGACATATTCAGCGTATGGGTAAACAAAGCAAAGGAGGTGCTA 786 Query 769 CAAAAAGCCTAA 780 |||||||||||| Sbjct 787 CAAAAAGCCTAA 798 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 40287785894 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5