BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg483200 Length=1195 Score E Sequences producing significant alignments: (Bits) Value AT2G41290.1 | Symbols: SSL2 | strictosidine synthase-like 2 | c... 1692 0.0 > AT2G41290.1 | Symbols: SSL2 | strictosidine synthase-like 2 | chr2:17210428-17212959 REVERSE LENGTH=1357 Length=1357 Score = 1692 bits (916), Expect = 0.0 Identities = 1109/1202 (92%), Gaps = 14/1202 (1%) Strand=Plus/Plus Query 1 aaaaaaaTCTGAAGAAAATGATGAAACTCCTTTTGGTGGTGGCAA-TATCTTTTGCCCTT 59 ||||||||||||| ||||||||||||||||| ||||||||||||| | ||| |||||||| Sbjct 39 AAAAAAATCTGAACAAAATGATGAAACTCCTCTTGGTGGTGGCAACT-TCTGTTGCCCTT 97 Query 60 CTCTTAAGCCTCACTGATTTTTCCGGTGAGAGACCAAAACAT---GGAGATTCCATGTTG 116 |||| ||| |||||||||| ||||||||| ||||||||||| ||||| ||||||||| Sbjct 98 ATCTTTAGCGTCACTGATTTATCCGGTGAGGGACCAAAACATGGAGGAGAATCCATGTTG 157 Query 117 ACAGTCCAATTCCCTGATTTCCGTCTGCTTCCGACCACCGGGGCTTTGGGACCGGAGAGT 176 ||||||||| ||||||||||||||||| |||| |||||||| |||||||||||||||||| Sbjct 158 ACAGTCCAAATCCCTGATTTCCGTCTGATTCCTACCACCGGAGCTTTGGGACCGGAGAGT 217 Query 177 TTTGTCTTCGATTTTTCCGGCGACGGTCCTTACACCGGTTTATCTGACGGTCGAATTGTT 236 |||||||| ||||||| |||||| |||||||||||||||||||||||||||||||||||| Sbjct 218 TTTGTCTTTGATTTTTTCGGCGATGGTCCTTACACCGGTTTATCTGACGGTCGAATTGTT 277 Query 237 AAGTGGCTAGCTAATGACAGCCGTTGGATCGATTTCGCCGTCACCACCTCCACAAGAGAA 296 ||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| Sbjct 278 AAGTGGCTAGCTAATGAGAGCCGTTGGATCGATTTCGCCGTCACCACCTCCGCAAGAGAA 337 Query 297 GGTTGTGAGGGCCCGCACGAGCACCAACGAACAGAACACGTGTGTGGACGACCATTGGGC 356 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 338 GGTTGTGAGGGCCCGCACGAGCACCAACGAACAGAACACGTGTGTGGACGACCATTGGGC 397 Query 357 CTTGCCTTTGACAAATCCACTGGTGACCTTTATATAGCCGATGCTTATATGGGCCTTCTT 416 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 398 CTTGCCTTTGACAAATCCACTGGTGACCTTTATATAGCCGATGCTTATATGGGCCTTCTT 457 Query 417 AAAGTTGGCCCAACAGGTGGTGTAGCCAATCAAATTTTGCCACGTGAGCTGAATGAGGCC 476 ||||||||||||||||||||||| |||| ||| | || ||||||||||| ||||||||| Sbjct 458 AAAGTTGGCCCAACAGGTGGTGTCGCCACTCAGGTGTTACCACGTGAGCTAAATGAGGCC 517 Query 477 CTTCGATTTACCAATTCATTGGATATCGATCCACAAACCGGAGTTATCTACTTTACCGAC 536 ||||||||||||||||| ||||||||| |||||| ||||||||| |||||||||||||| Sbjct 518 CTTCGATTTACCAATTCTTTGGATATCAATCCACGGACCGGAGTTGTCTACTTTACCGAC 577 Query 537 AGTAGTTCGGTTTATCAACGGAGGAACTATATAGGGGCGATGATGAGTGGGGACAGAACC 596 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 578 AGTAGTTCGGTTTATCAACGGAGGAACTATATAGGGGCGATGATGAGTGGGGACAAAACT 637 Query 597 GGTAGACTGATGAAGTACGACCCAAATACGAAACAAGTGACCACTCTTTTAAGCAACCTA 656 ||||||||||||||||||||| || ||||||||||||||||||||| |||||||| || Sbjct 638 GGTAGACTGATGAAGTACGAC--AAC-ACGAAACAAGTGACCACTCTTCTAAGCAACTTA 694 Query 657 GCGTTCCCAAACGGTGTCGTTTTAAGCCAAAACGGTGATTACCTTCTCGTCGTCGAGACC 716 ||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 695 GCGTTTGTAAACGGTGTCGCTTTAAGCCAAAACGGTGATTACCTTCTCGTCGTCGAGACC 754 Query 717 GCCACGTGTCGGGTTCT-ACGTTACTGGCGCAGCGCCACGTCGACGACGTGTAAATCTCG 775 |||| |||||| | || ||||||||||| || || |||||| | || | |||||| Sbjct 755 GCCATGTGTCGTAT-CTTACGTTACTGGCTCAACGAAACGTCGGTAAAGTCTCAATCTCA 813 Query 776 CGAGAACTACGAGATTTTCGCGGAGGGGCTCCCCGGGTTTCCCGACAACATAAAGAGGAG 835 ||| ||||||||||||||||||||||||||||| |||||||| |||||||||||||| || Sbjct 814 CGATAACTACGAGATTTTCGCGGAGGGGCTCCCTGGGTTTCCAGACAACATAAAGAGAAG 873 Query 836 TCCACGTGGCGGATTCTGGGTAGGCTTGAACACGAAACACTCAAAGCTGACAAAGTTTGC 895 ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || Sbjct 874 TCCACGTGGCGGATTCTGGGTAGGCTTGAACACAAAACACTCAAAGCTGACAAAGTTCGC 933 Query 896 CATGTCCAACGCGTGGCTTGGACGCGCCGCTTTGGGCCTGCCGGTGGACTGGATGAAGGT 955 |||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||||| Sbjct 934 CATGTCGAACGCGTGGCTTGGACGTGCCGCTTTGGGCCTGCCGGTGGATTGGATGAAGGT 993 Query 956 CCATTCGGTTTGGGCCAAGTACAACGGGAACGGCATGGCCGTGAGGTTGAGCGAGGATAG 1015 ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| Sbjct 994 CCATTCGGTTTGGGCCAGGTACAATGGGAACGGCATGGCCGTGAGGTTGAGCGAGGATAG 1053 Query 1016 TGGCGTAAT-TTCGGAGGTATTCGAGGGTCAAAAAGGAAA-TAAGTGGATATCTATAAGT 1073 |||||| || || | |||||||||| ||| ||||| |||| ||||||||||||||||||| Sbjct 1054 TGGCGTTATATTAG-AGGTATTCGAAGGT-AAAAATGAAAATAAGTGGATATCTATAAGT 1111 Query 1074 GAGGTTGAAGAAAGAGATGGAACTCTTTGGGTTGGATCGGTAAATACTCCTTTCGCTGGC 1133 ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 1112 GAGGTTGAAGAAAAAGATGGAACTCTTTGGGTTGGATCGGTGAATACTCCTTTCGCTGGC 1171 Query 1134 ATGTATAAAATCTAAAATTGATTAATACAGATGTGCTTTTCCAACCTTAAAATTCATAGA 1193 ||||||||||||||||||||| ||||||| || || ||||||||| || ||||||| | Sbjct 1172 ATGTATAAAATCTAAAATTGAGTAATACAAATATGTTTTTCCAACAATATGATTCATATA 1231 Query 1194 TA 1195 || Sbjct 1232 TA 1233 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 58684437105 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5