BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg483215 Length=895 Score E Sequences producing significant alignments: (Bits) Value AT2G41430.1 | Symbols: ERD15, LSR1, CID1 | dehydration-induced ... 1029 0.0 > AT2G41430.1 | Symbols: ERD15, LSR1, CID1 | dehydration-induced protein (ERD15) | chr2:17269232-17270542 FORWARD LENGTH=995 Length=995 Score = 1029 bits (557), Expect = 0.0 Identities = 690/750 (92%), Gaps = 26/750 (3%) Strand=Plus/Plus Query 163 CCAAGATCTAGAGATTTGAGAATGGCGATGGTATCAGGAAGACGATCTACTCTAAACCCC 222 ||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 255 CCATGATCTAGAGTTTTGAGAATGGCGATGGTATCAGGAAGACGATCTACTCTAAACCCC 314 Query 223 GACGCACCTCTCTTTGTTCCGGCAGCTGTACGACAAGTGGAAGATTTCTCACCGGAGTGG 282 ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 315 GACGCACCTCTTTTTATTCCGGCAGCTGTACGACAAGTGGAAGATTTCTCACCGGAGTGG 374 Query 283 TGGCAATTGGTCACAACTTCGACTTGGTACCATGACTACTGGATCAG-C--CAGCATCAA 339 ||||||||||| ||||||||||||||||||| ||| ||||||||||| | ||||| ||| Sbjct 375 TGGCAATTGGTGACAACTTCGACTTGGTACCCTGATTACTGGATCAGTCAGCAGCAGCAA 434 Query 340 GGTC-CAGATGGTTTCTATGACAATGGAGAGAATGAAAATGGTGGAGGCCAGGTTGATGT 398 || | | ||||||||||||||||| ||||||||||| ||||||||||| || | ||||| Sbjct 435 GG-CGCGGATGGTTTCTATGACAACGGAGAGAATGAGAATGGTGGAGGTCATATCGATGT 493 Query 399 AGCTGATCTTCTTCCAGAATCATTTGATTTTGATGACATGGAAGATTTCTTTGAAACTGA 458 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| Sbjct 494 AGCTGATCTTCTTCCAGAATCATTTGATTTTGATGATATGGAAGATTTCTTTGACACTGA 553 Query 459 TGCTGCTGAGTTTGATCAAGGATTTGATGGACGAATGTATTACCAAGCACCTTCCGAATT 518 |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| Sbjct 554 TGCTGCTGAGTTTGATCAAGGATTCGATGGAAGAATGTATTACCAAGCACCTTCCGAATT 613 Query 519 CGGCTTTGGAAAGAATGGTGAGATGGTTAGGAAATCAACTGGTAACAGGAGTCCGAAATC 578 |||||||||||||||||||||||||||| |||||||| ||| |||||||| |||| ||| Sbjct 614 TGGCTTTGGAAAGAATGGTGAGATGGTTAAGAAATCAAGTGGAAACAGGAGCCCGAGATC 673 Query 579 GATTGTGGAACCGGCAAAGTATGCGGAAAAGCCAGCGAAATGGGGAAACCAGAGGGTTGC 638 |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| Sbjct 674 GATTGTGGAACCAGCTAAGTATGCGGAAAAGCCAGCGAAATGGGGAAACCAGAGGGTTGC 733 Query 639 TGCT-C-CA-AGAAACATCCACCAGCCTCGCTGAAGAAGATATGTTGTTAACTAGTCAGA 695 |||| | | ||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 734 TGCTGCTCCGAGAAACATCCACCAGCCTCGCTGAAGA-GATATGTTGTTAACTAGTCAGA 792 Query 696 -A-GTCAGAGCAGTTTGGTCC-TGTATCTTTAGCCACCACCACTGTACCTTTGTAATTTT 752 | |||||||||||| |||| |||||||||||||||||| ||||||||||||||||| Sbjct 793 GAAGTCAGAGCAGTTCGGTCTGTGTATCTTTAGCCACCAC---TGTACCTTTGTAATTTT 849 Query 753 TAGTATTTGCTTCCACATA-AAAAATCTGTAACTTTGTACCTTTATGATGTTCATTCTCA 811 ||||||||||||||||| | ||||||||||||||||||| |||||||||||||||||||| Sbjct 850 TAGTATTTGCTTCCACA-ACAAAAATCTGTAACTTTGTATCTTTATGATGTTCATTCTCA 908 Query 812 A-CTTGTTGTTATCTCaaaaatgtaaaaacataaaaaaaa-----TGTAAACTTTGAAGA 865 | |||| | ||| ||||||||||||||||||||||||| ||||||||||||||| Sbjct 909 AACTTGCT---ATCACAAAAATGTAAAAACATAAAAAAAAAAAAATGTAAACTTTGAAGA 965 Query 866 GAAATGAGAACTAGAGTTTATTTCCCACCT 895 ||||||||||||||||||||||||| |||| Sbjct 966 GAAATGAGAACTAGAGTTTATTTCCTACCT 995 Score = 219 bits (118), Expect = 5e-56 Identities = 157/174 (90%), Gaps = 10/174 (6%) Strand=Plus/Plus Query 1 AGCTTCGTCACCGAACCTTACTTTATATATTAGTCCTTCTTCTTCTCATCTTCTGGCAAC 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 1 AGCTTCGTCACCGAACCTTACTTTATATATTAGTCCTTCTTCTTCTCATCTTCTCGCAAC 60 Query 61 GTAGGTTCTGGTGATTGATCCTAATCCGTTTTGCTTGTTAAAAAGA-A-GAAGACATATT 118 |||||||||||||| |||||||||||||||| |||| ||||||| | | ||||||||||| Sbjct 61 GTAGGTTCTGGTGAATGATCCTAATCCGTTTAGCTT-TTAAAAAAATAAGAAGACATATT 119 Query 119 TTTATCAA----A-CAACTTGAGCAAGTAGAAGCAGATATTTTCCTCAGCCAAG 167 | ||||| | |||||||||||||| | |||||||||||||||| |||||| Sbjct 120 T--ATCAACTTGATCAACTTGAGCAAGTTGCAGCAGATATTTTCCTCGGCCAAG 171 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 43703707890 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5