BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg483796 Length=1723 Score E Sequences producing significant alignments: (Bits) Value AT2G46420.1 | Symbols: | Plant protein 1589 of unknown functio... 1842 0.0 AT3G61700.2 | Symbols: | Plant protein 1589 of unknown functio... 861 0.0 > AT2G46420.1 | Symbols: | Plant protein 1589 of unknown function | chr2:19053686-19057096 FORWARD LENGTH=1868 Length=1868 Score = 1842 bits (997), Expect = 0.0 Identities = 1297/1434 (90%), Gaps = 52/1434 (4%) Strand=Plus/Plus Query 192 GTGTTGTTTTTACTAATTCTGAATCTTTAGAGGGCCCAAAAATTCGTCGAG-AAATCTGT 250 ||||||||||||||| |||||||||||||||||| ||||||||||||||| ||| | || Sbjct 268 GTGTTGTTTTTACTAGCTCTGAATCTTTAGAGGGCTCAAAAATTCGTCGAGAAAACCAGT 327 Query 251 C-TTGGAAGTGTAGCATTTTGGATTAAATCT-TGAATTTAA-GGTGAA-ACCACCGTTTT 306 | ||||||||||||||||||||||| | | ||| || || |||| | | | ||| Sbjct 328 CTTTGGAAGTGTAGCATTTTGGATTCGCT-TGTGACTTGAATCTTGAATATTA--GGTTT 384 Query 307 GTATTTGGTCAACAACATCAGAAACATGCGTGCTCAGA-----AG----TT-G-----AT 351 ||||||||||||||||||||||||||| ||||||||| || || | || Sbjct 385 CTATTTGGTCAACAACATCAGAAACATGTGTGCTCAGATGTTGAGCTCTTTAGATTCAAT 444 Query 352 TGTTGTGAACGTTGTTAAGGTGCATAGTTG-TCATTGAAGGATGCACGATTTTTATATTT 410 |||||||||| |||| |||| | |||| || | ||||||||||||| |||||||||||| Sbjct 445 TGTTGTGAACATTGTCAAGGAGAATAG-TGATTATTGAAGGATGCAAGATTTTTATATTC 503 Query 411 AGCTCCAATGAAGAAC-GA-A-CAG-T-C-TTCTTCTACCCAAGTTTCACTTGAGTCCCA 464 ||||| |||||||||| || | || | | ||||||||||||||||||| ||||||||| Sbjct 504 AGCTCTAATGAAGAACGGACAGGAGTTGCAGTCTTCTACCCAAGTTTCACATGAGTCCCA 563 Query 465 AGGTGAACAAAAAGTTAATCAATCAATAGAAGCCCCTATACAAGATTCTGGTTCTGTATC 524 ||||||||| ||||||||| |||| ||||||| || ||||||||||||||||||||||| Sbjct 564 AGGTGAACAGAAAGTTAATTTATCAGTAGAAGCTCCAATACAAGATTCTGGTTCTGTATC 623 Query 525 TGCCTCAAGTAATGACGGTAGGAAAGTTTCAAGGCAAGATATTGAACTTGTCCAAAATTT 584 ||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| Sbjct 624 TGCCTCAAGTAATGACGGTAGGAAAGTGTCAAGACAAGATATTGAACTTGTCCAAAATTT 683 Query 585 GATAGAAAGATGTCTTCAGTTGTACATGAACAGAGATGAGGTCGTCAAA-ACCCTCTTGA 643 ||||||||||||||| ||||||||||||| ||||||||||||||| ||| || ||||||| Sbjct 684 GATAGAAAGATGTCTCCAGTTGTACATGAGCAGAGATGAGGTCGT-AAAGACACTCTTGA 742 Query 644 CCCGTGCAAGGATTGACCCTGGTTTTACAACCTTAGTATGGCAGAAACTGGAAGAAGAAA 703 ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| Sbjct 743 CCCGTGCAAGGATTGACCCTGGTTTTACAACATTAGTATGGCAAAAACTGGAAGAAGAAA 802 Query 704 ACGAAGAGTTTTTCAGGGCATATTACATCAGGCTGAAACTGAAGAAGCAAATAGTTGTAT 763 ||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 803 ACGCAGAGTTTTTCAGGGCATATTACATCAGACTGAAACTGAAGAAGCAAATAGTTGTAT 862 Query 764 TCAACT-ATTTGCTGGAGCACCAGTATCACCTCACGAAGTATAATGTACATTCAAAAGTT 822 |||| | ||||||| ||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 863 TCAA-TCATTTGCTTGAGCATCAGTATCACCTCACGAAGTATAATGTACATTCAAAAGTT 921 Query 823 CCTCTGGTCCCGATGCAGAACGGTATTCATCCCATGGCATCTGTGAACAACATGCCCATG 882 ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 922 CCTCTGGTCCCAATGCAGAACGGTATTCATCCTATGGCATCTGTGAACAACATGCCCATG 981 Query 883 GGATATCCAGTACTACAACATCCACAAATGCATGCTCAAGGTCATCCCCATCTTGATCCA 942 ||||| ||||||||||||||||| || |||||||||||||||||||||||||||||||| Sbjct 982 GGATACCCAGTACTACAACATCCTCAGATGCATGCTCAAGGTCATCCCCATCTTGATCCT 1041 Query 943 ATGAGCTGTGGAATGTCAAGCTGCCATGTGGTTAATGGAGTCCCTGCACCTGCTAATTTC 1002 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1042 ATGAGCTGTGGAATGTCAAGCTGCCATGTGGTTAATGGAGTCCCTGCACCTGCTAATTTC 1101 Query 1003 CAACCAATCAGGATCAACTCAGGGAATGATATGGTAATAGATACAACCATGGCTGAGCCA 1062 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 1102 CAACCAATGAGGATCAACTCAGGGAATGATATGGTAATAGATACAACCATGGCTGAACCA 1161 Query 1063 ACTCCAATGATTCCACCAAGCAGTGGCATGTCGGATATGCCAGCGAGCCCAGCTTCTGTG 1122 ||||||||||||||||||| ||||| |||||||||||||||| || |||||||||||| Sbjct 1162 ACTCCAATGATTCCACCAAATAGTGGTATGTCGGATATGCCAGTAAGTCCAGCTTCTGTG 1221 Query 1123 GCGTCAAGTGGACACTTTCCATTTGCTGCTTCAGACATGTCAGGGATGGGAATGGATACA 1182 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 1222 GCGTCAAGCGGACACTTTCCATTTGCTGCTTCAGACATGTCAGGGATGGGAATGGACACG 1281 Query 1183 TCAGCTCTTGATTCTGCTTTCACATCTGATGT-GGCAACTTCAGTAGGGTTACAACTTGG 1241 ||||||||||| |||||||||||||||||||| || |||||||||||||||||||||||| Sbjct 1282 TCAGCTCTTGACTCTGCTTTCACATCTGATGTCGG-AACTTCAGTAGGGTTACAACTTGG 1340 Query 1242 ATCAGATGGAGGAGCTGGAAATTCTAGAGACCCTCTCAGGCCATTTGATCAGATACCTTG 1301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1341 ATCAGATGGAGGAGCTGGAAATTCTAGAGACCCTCTCAGGCCATTTGATCAGATACCTTG 1400 Query 1302 GAACTTTAGCCTCTCTGACCTCACTGCAGATTTGTCAAATCTTGGAGATTTAGGGGCCTT 1361 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 1401 GAACTTTAGTCTCTCTGACCTCACTGCAGATTTGTCAAATCTTGGAGATTTAGGGGCTTT 1460 Query 1362 AGGAAACTATCCCGGTTCACCTTTTCTTCCTTCCGATTCAGAGATTTTACTCGATTCTCC 1421 |||||||||||||||||| |||||||| || || ||||||||||||||||| || ||||| Sbjct 1461 AGGAAACTATCCCGGTTCTCCTTTTCTGCCATCTGATTCAGAGATTTTACTTGACTCTCC 1520 Query 1422 TGAACAAGAGGGCATAGATGAATTCTTTGTGGATTCGGTTCCAGGACCTCCATGTTCACA 1481 |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| || Sbjct 1521 CGAACAAGAGGACATAGATGAATTCTTTGTGGATTCGATTCCAGGACCTCCATGTTCTCA 1580 Query 1482 GTCAGAAGAAGACAAGTCTTAATCAAGAAT-TCA-A---GATTA-T-GATA---T-TTG- 1529 ||||||||||||||||||||||||||| | | | | ||| | | || | | || Sbjct 1581 GTCAGAAGAAGACAAGTCTTAATCAAGCTTATGATATTTGATCAATAGAAACAGTCTTAT 1640 Query 1530 -AT--AGCAAGCAAGCAAGGTTTGTGCCGTCTCGCTATATTAGAGAAAACCTCC 1580 || |||||||||||| ||||||||||| || |||||||||||||||||||| Sbjct 1641 TATCTAGCAAGCAAGCATTGTTTGTGCCGTTTCTCTATATTAGAGAAAACCTCC 1694 Score = 117 bits (63), Expect = 4e-25 Identities = 103/120 (86%), Gaps = 12/120 (10%) Strand=Plus/Plus Query 1607 ATAGACTTAGATTAATTTCTTAG-TG-TTCTTTATTGTACACCTTTATTTTGGGA-TTCT 1663 ||||||||||||||||| || || || || ||||||||||||||||||||||||| || | Sbjct 1757 ATAGACTTAGATTAATTGCTCAGTTGTTTGTTTATTGTACACCTTTATTTTGGGACTT-T 1815 Query 1664 GCAAATCATTGTATTATATCTAAGTATCTCCCAATAATCTATTTTCTTGTTGGATAGTTC 1723 || || ||||| || ||| |||||||||||||||||||||||||||||||||||| Sbjct 1816 GCTAAGCATTG-----TA--TAA-TATCTCCCAATAATCTATTTTCTTGTTGGATAGTTC 1867 Score = 93.5 bits (50), Expect = 6e-18 Identities = 60/65 (92%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 49 AGGACTTGTAAATTCTAAGCTTGCTTATGAGAGTAATGGCGTAGCAAAATCTTTATCCAA 108 ||||||| |||||| ||||| ||||||||||||||||||||||||||||||||||| || Sbjct 67 AGGACTTAAAAATTCCAAGCTCGCTTATGAGAGTAATGGCGTAGCAAAATCTTTATCTAA 126 Query 109 CTCTT 113 ||||| Sbjct 127 CTCTT 131 Score = 63.9 bits (34), Expect = 5e-09 Identities = 34/34 (100%), Gaps = 0/34 (0%) Strand=Plus/Plus Query 1 AGCGGACGTCTCCGTCTCTTCTTCTGCTTCTAAC 34 |||||||||||||||||||||||||||||||||| Sbjct 1 AGCGGACGTCTCCGTCTCTTCTTCTGCTTCTAAC 34 > AT3G61700.2 | Symbols: | Plant protein 1589 of unknown function | chr3:22835207-22839089 FORWARD LENGTH=1872 Length=1872 Score = 861 bits (466), Expect = 0.0 Identities = 911/1111 (82%), Gaps = 89/1111 (8%) Strand=Plus/Plus Query 436 TCTTCTACCCAAGTTTCACTTGAGTCCCAAGGTGAACA-AAAAGTTAATCAATCAATAGA 494 ||||| || |||| ||||| ||| || |||||||| || |||| || | ||||||||| Sbjct 525 TCTTCCACTCAAGCTTCACATGACTCTCAAGGTGACCAGAAAA-CCAACCTATCAATAGA 583 Query 495 AGCCCCTATACAAGATTCTGGTTCTGTATCTGCCTCAAGTAATGACGGTAGGAAAGTTTC 554 || ||||||||||||||||||||||||||||| ||||| |||||| ||||||||||||| Sbjct 584 TGCTCCTATACAAGATTCTGGTTCTGTATCTGCTTCAAGCAATGACAGTAGGAAAGTTTC 643 Query 555 AAGGCAAGATATTGAACTTGTCCAAAATTTGATAGAAAGATGTCTTCAGTTGTACATGAA 614 | | ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 644 ACGACAAGATATTGAACTTGTTCAAAATTTGATAGAAAGATGTCTTCAGTTGTACATGAA 703 Query 615 CAGAGATGAGGTCGTCAAAACCCTCTTGACCCGTGCAAGGATTGACCCTGGTTTTACAAC 674 ||||||||||||||| || || |||||||| ||||||||||| |||||||| |||||||| Sbjct 704 CAGAGATGAGGTCGTGAAGACTCTCTTGACTCGTGCAAGGATAGACCCTGGATTTACAAC 763 Query 675 CTTAGTATGGCAGAAACTGGAAGAAGAAAACGAAGAGTTTTTCAGGGCATATTACATCAG 734 ||| || ||||||||| ||||||||||||||| ||| ||||||||||||||||| || || Sbjct 764 CTTGGTTTGGCAGAAATTGGAAGAAGAAAACGCAGACTTTTTCAGGGCATATTATATAAG 823 Query 735 GCTGAAACTGAAGAAGCAAATAGTTGTATTCAA-CTATTTGCTGGAGCACCAGTATCACC 793 |||||||||||||||||||||| || | ||||| | ||||||| ||||||||||| || | Sbjct 824 GCTGAAACTGAAGAAGCAAATAATTTTGTTCAATC-ATTTGCTTGAGCACCAGTACCATC 882 Query 794 TCACGAAGTATAATG-T--ACATTCAAAAGTTCCTCTGGTC-CCGATGCAGAACGGTATT 849 ||| ||||||| | | || | ||||||||||||||| | ||||| || ||||| || Sbjct 883 TCATGAAGTATCCTCCTGGACCTCCAAAAGTTCCTCTGG-CACCGATACAAAACGGAATG 941 Query 850 CATCCCATGGCATCTGTGAACAACATGCCCATGGGATATCCAGTACTACAACATCCACAA 909 |||||||||||| |||| |||| |||| |||||||| ||||||||||||||||| ||| Sbjct 942 CATCCCATGGCACCTGTTAACA---TGCCGATGGGATACCCAGTACTACAACATCCTCAA 998 Query 910 ATGCATGCTCAAGGTCATCCCCATC-T-T-GATCCAATGAGCTGTGGAATGTCAAGCTGC 966 ||||||| || ||| |||||||||| | | ||| ||||| | || | | | |||||| Sbjct 999 ATGCATGTTCCAGGCCATCCCCATCATCTTGATGCAATGGGA-GT--A-T--CGAGCTGC 1052 Query 967 CATGTGGTTAATGGAGTCCCTGCACCTGCTAATTTCCAACCAATCAGGATCAACT-CAGG 1025 ||||| ||||||||||||||||| |||||||||||||| || | || || || | ||| Sbjct 1053 CATGTTGTTAATGGAGTCCCTGCCCCTGCTAATTTCCATCCTTTGAGAATGAA-TACAGC 1111 Query 1026 GAATGATATGGTAATAGATACAACCATG-G--CTGA-GCCAACTCC--AA-TGATTCCAC 1078 |||||||||||| || |||||||| || | | || || |||||| || ||||||||| Sbjct 1112 GAATGATATGGTGATCGATACAAC--TGCGAAC-GATGC-AACTCCTCAAGTGATTCCAC 1167 Query 1079 CAAGCAGTGG--C-ATGTCGGATATGCCAGCGAGCCCAGCTTCTGTGGCGTCAAGTGGAC 1135 ||| |||||| | ||| | || ||| |||||| ||||||||||||||||||||||||| Sbjct 1168 CAAACAGTGGTGCGATGCCTGAGATGGTAGCGAGTCCAGCTTCTGTGGCGTCAAGTGGAC 1227 Query 1136 ACTTTCCATTTGCTGCTTCAGACATGTCAGGG-ATGGGAATGGATACATCAGCT-CTTGA 1193 |||||||||||||||||||||||||||| ||| |||| |||||| || |||| | ||||| Sbjct 1228 ACTTTCCATTTGCTGCTTCAGACATGTC-GGGTATGGTAATGGACACTTCAG-TACTTGA 1285 Query 1194 TTCTGCTTTCACATCTGATGT-GGCAACTTCAGTAGGGTTACAACTTGGATCAGATGGAG 1252 ||| || ||||||||||| || || | | | | | | | ||| || || Sbjct 1286 TTCGGCATTCACATCTGACGTTGG-A-C--C-G--G----A----T-GGA---GA---AG 1323 Query 1253 GAGCTGGAAATTCTAGAGAC-CCTCTCAGGCCATTTGATCAGATACCTTGGAACTTTAGC 1311 |||| || ||||| ||||| || |||||| ||||||||||||| ||||||||||||||| Sbjct 1324 GAGCCGGGAATTCCAGAGATTCC-CTCAGGTCATTTGATCAGATCCCTTGGAACTTTAGC 1382 Query 1312 CTCTCTGACCTCACTGCAGATTTGTCAAATCTTGGAGAT-T-TA-G--G--G-----G-- 1357 || ||||| ||||| ||||||||||||||||| |||||| | || | | | | Sbjct 1383 CTTTCTGATCTCACCGCAGATTTGTCAAATCTGGGAGATATGTATGTTGCAGATTTAGGA 1442 Query 1358 -CCTTAGGAAACTATCCCGGTTCACCTTTTCTTCCTTCCGATTCAGAGATTTTACTCGAT 1416 |||||||||||||||| || || || |||||||| || |||||||||||||| || ||| Sbjct 1443 GCCTTAGGAAACTATCCAGGCTCTCCATTTCTTCCATCTGATTCAGAGATTTTCCTGGAT 1502 Query 1417 TCTCCTGAACAAGAGGGCATAGATGAATTCTTT-GTGGATTCGGTTCCAGGACCTCCATG 1475 |||||||||||||||| |||||| || || ||| ||||||||||| || ||||||| | Sbjct 1503 TCTCCTGAACAAGAGGACATAGAGGAGTT-TTTCGTGGATTCGGTGCCTGGACCTC---G 1558 Query 1476 TTC-ACAGTCAGAAGAAGACAAGTCTT-AAT 1504 ||| | | ||||| ||||| ||| ||| ||| Sbjct 1559 TTCTA-ATTCAGATGAAGAGAAGCCTTGAAT 1588 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 85190324865 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5