BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg483894 Length=1175 Score E Sequences producing significant alignments: (Bits) Value AT2G47180.1 | Symbols: AtGolS1, GolS1 | galactinol synthase 1 |... 1703 0.0 > AT2G47180.1 | Symbols: AtGolS1, GolS1 | galactinol synthase 1 | chr2:19368798-19370441 REVERSE LENGTH=1355 Length=1355 Score = 1703 bits (922), Expect = 0.0 Identities = 1049/1111 (94%), Gaps = 6/1111 (1%) Strand=Plus/Plus Query 1 CTCATCAGCAAACACAAGCACATAACTAGATAAACTCTAAATCCTCTCAGCTA-ATCACG 59 ||||||||||||||||| |||| |||||||||||||||||||||| |||| | |||||| Sbjct 1 CTCATCAGCAAACACAAACACACGACTAGATAAACTCTAAATCCTCACAGC-AGATCACG 59 Query 60 TGCTAATCACATGGCTCCGGGGCTTACTCCAACCGCCGATGCTGA-ATCCACCGTGACGA 118 ||||||||||||||||||||||||||||| |||||| |||||| | ||||||||||||| Sbjct 60 TGCTAATCACATGGCTCCGGGGCTTACTCAAACCGCTGATGCT-ATGTCCACCGTGACGA 118 Query 119 TAACAAAACCGTTACTACCATCAGTCCAAGACAGCGATCGAGCTTACGTGACGTTTCTTG 178 |||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 119 TAACAAAACCGTCACTGCCATCAGTCCAAGACAGCGATCGAGCTTACGTGACGTTTCTTG 178 Query 179 CCGGAAACGGTGATTACGTGAAAGGAGTCGTTGGTTTAGCCAAAGGTTTAAGGAAAGTCA 238 | |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 179 CTGGAAACGGTGATTACGTGAAAGGAGTCGTTGGTTTAGCCAAAGGGTTAAGGAAAGTCA 238 Query 239 AATCGGCTTATCCACTCGTTGTGGCGATATTACCGGACGTGCCGGAGGAGCATCGTCGTA 298 ||||||||||||||||||| || ||||| ||||| ||||| |||||||| || ||||||| Sbjct 239 AATCGGCTTATCCACTCGTAGTAGCGATGTTACCCGACGTCCCGGAGGAACACCGTCGTA 298 Query 299 TACTTGTGGAACAAGGATGCATTGTTCGTGAAATTGAACCCGTTTACCCACCCGAGAACC 358 |||||||||| ||||||||||| || |||||||| ||||||||||||||||||||||||| Sbjct 299 TACTTGTGGATCAAGGATGCATCGTCCGTGAAATCGAACCCGTTTACCCACCCGAGAACC 358 Query 359 AAACTCAGTTCGCCATGGCTTATTACGTCATCAACTACTCTAAACTCCGTATCTGGAAGT 418 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 359 AAACTCAGTTCGCCATGGCTTATTACGTCATCAACTACTCTAAACTCCGTATCTGGAAGT 418 Query 419 TTGTGGAGTATAGTAAAATGATTTATTTGGATGGAGACATTCAAGTTTACGAAAACATCG 478 |||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||| Sbjct 419 TTGTGGAGTATAGTAAAATGATATATTTAGATGGAGACATTCAAGTTTACGAAAACATCG 478 Query 479 ATCACTTGTTTGATCTACCATATGGCTATTTCTACGCGGTGATGGATTGTTTCTGCGAGA 538 ||||||||||||| |||||| |||||||||| ||||||||||||||||||||||| |||| Sbjct 479 ATCACTTGTTTGACCTACCAGATGGCTATTTGTACGCGGTGATGGATTGTTTCTGTGAGA 538 Query 539 AAACATGGAGCCACACGCCGCAATACAAGATCGGATATTGCCAACAATGCCGCGACAAAG 598 |||||||||| ||||||||||||||||||||| |||||||||||||||||| |||||||| Sbjct 539 AAACATGGAGTCACACGCCGCAATACAAGATCAGATATTGCCAACAATGCCCCGACAAAG 598 Query 599 TCCAGTGGCCAAAGGCGGAGCTTGGAGAGCCGCCAGCTCTTTACTTCAACGCCGGAATGT 658 ||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||||| Sbjct 599 TCCAGTGGCCAAAAGCGGAGCTTGGAGAGCCACCGGCTCTTTACTTCAACGCCGGAATGT 658 Query 659 TCTTGTTCGAGCCAAACCTCGAGACTTACGAGGACCTATTAAGAACCCTTAAAATCACTC 718 |||||| |||||| |||||||||||||||||||| ||| || |||| ||||||||||||| Sbjct 659 TCTTGTACGAGCCTAACCTCGAGACTTACGAGGATCTACTACGAACACTTAAAATCACTC 718 Query 719 CTCCGACCCCTTTCGCTGAACAGGATTTTCTAAACATGTACTTCAAGAAAATCTACAAGC 778 ||||||| ||||||||||||||||||||| | ||||||||||| |||||||||||||||| Sbjct 719 CTCCGACTCCTTTCGCTGAACAGGATTTTTTGAACATGTACTTTAAGAAAATCTACAAGC 778 Query 779 CGATTCCTTTAGTGTACAATCTCGTCCTTGCGATGTTATGGCGTCATCCAGAAAATGTAG 838 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 779 CGATTCCTTTAGTGTACAATCTCGTCCTTGCGATGTTATGGCGTCACCCAGAAAATGTAG 838 Query 839 AGCTTGGAAAAGTCAACGTGGTTCACTACTGTGCAGCGGGTTCGAAGCCGTGGAGATACA 898 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 839 AGCTTGGAAAAGTCAAGGTGGTTCACTACTGTGCAGCGGGTTCGAAGCCGTGGAGATACA 898 Query 899 CAGGGAAAGAAGCGAACATGGACAGGGAAGACATAAAAATGTTAGTGAAGAAATGGTGGG 958 |||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||| Sbjct 899 CAGGGAAAGAAGCGAACATGGAGAGGGAAGATATAAAAATGTTAGTGAAAAAATGGTGGG 958 Query 959 ACATTTACAACGATGAATCCTTGGATTACAAGAAACCTGT-AGCCGTTGTGGGCACAGAG 1017 |||||||| |||| |||||||||||||||||||||||||| | ||||||||| ||||||| Sbjct 959 ACATTTACGACGACGAATCCTTGGATTACAAGAAACCTGTTA-CCGTTGTGGACACAGAG 1017 Query 1018 GCCGATCTCGTGAATCTGAAGCCCTTTATCACCGCTCTTACTGAAGCTGGCCGGGTCAAC 1077 | ||||||||||||||||||||| || ||||||||||||||||||||||||||| ||||| Sbjct 1018 GTCGATCTCGTGAATCTGAAGCCGTTCATCACCGCTCTTACTGAAGCTGGCCGGCTCAAC 1077 Query 1078 TACGTGACCGCACCGTCCGCTGCTTGAATGT 1108 ||||||||||||||||||||||||||||||| Sbjct 1078 TACGTGACCGCACCGTCCGCTGCTTGAATGT 1108 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 57680426205 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5