BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg483991 Length=1739 Score E Sequences producing significant alignments: (Bits) Value AT2G48020.2 | Symbols: | Major facilitator superfamily protein... 2549 0.0 > AT2G48020.2 | Symbols: | Major facilitator superfamily protein | chr2:19644255-19647180 FORWARD LENGTH=1751 Length=1751 Score = 2549 bits (1380), Expect = 0.0 Identities = 1547/1623 (95%), Gaps = 29/1623 (2%) Strand=Plus/Plus Query 128 AGGCTTCGTCTCTTTTGCAA-TTTTGAGTTAGCCAAGTGCTCAAGGGAGATACATAATAC 186 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 121 AGGCTTCGTCTCTTTTGCAATTTTTGAGTTAGCCAAGTGCTCAAGGGAGATACATAATAC 180 Query 187 CTGAAGATGTCAAAGGCAAAAAGTGATGCCGTCAGAGAACCATTGGTGGACAAGAATATG 246 ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 181 CTGAAGATGTCCAAGGC---AAGTGATGCCGTCAGAGAACCATTGGTGGACAAGAATATG 237 Query 247 GCTGGATCAAAACCAGACCAGCCGTGGATGGTTTATCTCAGCACATTTGTTGCGGTCTGT 306 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 238 GCTGGATCAAAACCAGACCAGCCGTGGATGGTTTATCTCAGCACATTCGTTGCGGTCTGT 297 Query 307 GGTTCTTTTGCGTTTGGTTCTTGTGCGGGATACTCTTCACCTGCTCAGGCTGCAATTAGG 366 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 298 GGTTCTTTTGCGTTCGGTTCTTGTGCGGGATACTCTTCACCTGCTCAGGCTGCAATTAGG 357 Query 367 AATGACCTTTCACTGACTATAGCTGAGTTTTCACTCTTTGGCTCTTTGCTAACTTTTGGC 426 |||||||||||| |||||||||||||||||||||||||||| ||||| |||||||||||| Sbjct 358 AATGACCTTTCATTGACTATAGCTGAGTTTTCACTCTTTGGTTCTTTACTAACTTTTGGC 417 Query 427 GCAATGATTGGCGCTATAACAAGCGGGCCTATAGCTGATTTGGTTGGAAGAAAGGGGGCG 486 |||||||| || ||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 418 GCAATGATCGGTGCTATAACAAGCGGGCCTATAGCTGATTTAGTTGGAAGAAAGGGGGCG 477 Query 487 ATGAGAGTTTCCTCTGCATTTTGTGTAGTCGGGTGGCTAGCAATCTTCTTTGCCAAGGGA 546 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 478 ATGAGAGTTTCCTCTGCATTTTGTGTAGTCGGGTGGCTAGCAATCATCTTTGCCAAGGGA 537 Query 547 GTAGTGGCTCTGGACCTCGGAAGACTGGCAACGGGATATGGAATGGGAGCATTCTCCTAT 606 ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| Sbjct 538 GTAGTGGCTCTGGACCTTGGAAGACTGGCAACGGGATATGGAATGGGAGCATTTTCCTAT 597 Query 607 GTGGTACCAATCTTTATAGCCGAAATTGCACCTAAAACTTTCCGAGGGGCTCTAACCACA 666 ||||| |||||||||||||| ||||||||||||||||||||| ||||||||||||||||| Sbjct 598 GTGGTGCCAATCTTTATAGCAGAAATTGCACCTAAAACTTTCAGAGGGGCTCTAACCACA 657 Query 667 CTGAACCAGATTTTGATCTGCACTGGAGTGTCGGTTTCCTTCATCATAGGCACACTAGTG 726 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 658 CTGAACCAGATTCTGATCTGCACTGGAGTGTCGGTTTCCTTCATCATAGGCACACTAGTG 717 Query 727 ACGTGGAGAGTCTTAGCATTGATAGGAATCATCCCATGCGCTGCCTCCTTTCTTGGCCTC 786 |||||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct 718 ACGTGGAGAGTCTTGGCATTAATAGGAATCATCCCATGCGCTGCCTCCTTCCTTGGCCTC 777 Query 787 TTTTTTATCCCTGAGTCTCCAAGATGGTTGGC-AAAGATGGGGCGTGATTCGGAGTTTGA 845 ||||||||||||||||||||||||||| |||| |||| ||||||||||| |||||||||| Sbjct 778 TTTTTTATCCCTGAGTCTCCAAGATGGCTGGCAAAAG-TGGGGCGTGATACGGAGTTTGA 836 Query 846 AGCTTCACTGAGGAAGCTCCGTGGGAAGAAGGCTGATATTTCGCAGGAGGCAGCAGAGAT 905 |||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 837 AGCTGCACTGAGGAAGCTCCGTGGGAAGAAGGCTGATATTTCGGAGGAGGCAGCAGAGAT 896 Query 906 TCAGGATTATATCGAAACTCTGGAAAGGCTACCGAAAGCCAAGATGCTGGATTTGTTTCA 965 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 897 CCAGGATTATATCGAAACTCTGGAAAGGCTACCGAAAGCCAAGATGCTGGATTTGTTTCA 956 Query 966 GAGGAGATACATACGCTCTGTTCTTATAGCTTTTGGGTTGATGGTGTTTCAGCAGTTTGG 1025 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 957 GAGGAGATACATACGCTCTGTTCTTATAGCTTTCGGGTTGATGGTGTTTCAGCAGTTTGG 1016 Query 1026 AGGAATCAACGGAATATGTTTCTACACAAGCTCGATATTTGAGCAAGCAGGTTTTCCCAC 1085 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1017 AGGAATCAACGGAATATGTTTCTACACAAGCTCGATATTTGAGCAAGCAGGTTTTCCCAC 1076 Query 1086 AAGACTTGGGATGATAATATACGCTGTTCTTCAGGTGGTAATCACTGCGCTTAATGCACC 1145 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 1077 AAGACTTGGGATGATAATATATGCTGTTCTTCAGGTGGTAATCACTGCGCTTAATGCACC 1136 Query 1146 GATAGTTGACAGAGCCGGAAGAAAACCGTTGCTACTGGTTTCTGCAACAGGGTTAGTGAT 1205 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 1137 GATAGTTGACAGAGCCGGAAGAAAACCATTGCTACTGGTTTCTGCAACAGGGTTAGTGAT 1196 Query 1206 AGGCTGTTTGATAGCAGCGGTCTCTTTCTATCTCAAGGTTCACGACATGGCACGCGAAGC 1265 ||||||||||||||||||||| ||||||||||||||||||||||||||||| | |||||| Sbjct 1197 AGGCTGTTTGATAGCAGCGGTTTCTTTCTATCTCAAGGTTCACGACATGGCGCACGAAGC 1256 Query 1266 AGTCCCAGTCCTGGCTGTTGTTGGTATAATGGTGTACATAGGATCGTTTTCAGCAGGAAT 1325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1257 AGTCCCAGTCCTGGCTGTTGTTGGTATAATGGTGTACATAGGATCGTTTTCAGCAGGAAT 1316 Query 1326 GGGGGCAATGCCGTGGGTGGTCATGTCTGAGATATTTCCCATAAACATAAAAGGAGTAGC 1385 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1317 GGGAGCAATGCCGTGGGTGGTCATGTCTGAGATATTTCCCATAAACATAAAAGGAGTAGC 1376 Query 1386 AGGAGGCATGGCGACGCTGGTGAACTGGTTTGGAGCGTGGGCTGTTTCTTACACTTTCAA 1445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1377 AGGAGGCATGGCGACGCTGGTGAACTGGTTTGGAGCGTGGGCTGTTTCTTACACTTTCAA 1436 Query 1446 CTTCTTCATGTCCTGGAGCTCTTACGGTACTTTCCTCATTTACGCTGCCATCAACGCGCT 1505 |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 1437 CTTCCTCATGTCCTGGAGCTCTTACGGAACTTTCCTCATTTACGCTGCCATCAACGCGCT 1496 Query 1506 GGCCATTGTCTTCGTCATTGCCATCGTACCTGAAACGAAAGGGAAGACATTGGAGCAGAT 1565 ||||||||||||||||||||||||||| ||||| || ||||||||||||||||||||||| Sbjct 1497 GGCCATTGTCTTCGTCATTGCCATCGTGCCTGAGACAAAAGGGAAGACATTGGAGCAGAT 1556 Query 1566 CCAAGCCGTAGTCAATCCATAGCTCAAACACATGTTATTATTTCCTAGATGTTTCGTGTC 1625 |||||| ||||||||||||||||||||||| | | |||||||||| ||| || Sbjct 1557 CCAAGCTATAGTCAATCCATAGCTCAAACAC-T-T--------CCTAGATGTT-CGTTTC 1605 Query 1626 TATT--C-A-CTTGGGACATTAAGTAGCAATCTTGAATCTCTTTGCTTTTAAGATTCTTT 1681 |||| | | || ||||||| || | ||||||||| ||||||||||||||| |||||||| Sbjct 1606 TATTAGCCAGCT-GGGACATAAATT-GCAATCTTGGATCTCTTTGCTTTTATGATTCTTT 1663 Query 1682 ACTTG-G---A-TTGTTATCAATCTCTCTATTTCTAATGTCTTCTTATTGAGCTTTGGAC 1736 ||| | | | ||||||||| |||||||||||||||| |||||||| ||| |||||||| Sbjct 1664 ACT-GAGTTCAATTGTTATCACTCTCTCTATTTCTAATCTCTTCTTAATGAACTTTGGAC 1722 Query 1737 TTC 1739 ||| Sbjct 1723 TTC 1725 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 85993533585 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5