BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg484368 Length=875 Score E Sequences producing significant alignments: (Bits) Value AT3G26060.2 | Symbols: ATPRX Q | Thioredoxin superfamily protei... 1282 0.0 > AT3G26060.2 | Symbols: ATPRX Q | Thioredoxin superfamily protein | chr3:9524725-9526407 FORWARD LENGTH=1020 Length=1020 Score = 1282 bits (694), Expect = 0.0 Identities = 836/900 (93%), Gaps = 27/900 (3%) Strand=Plus/Plus Query 1 TTCTTCTACT-CTATGCTCTAACCACGTCCTTGTAGAGGAAAAGaaaaaaaaTGGCTGCT 59 |||||||||| | ||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 33 TTCTTCTACTAC-ATGCTCTAATCACGTCCTTGTAGAGGAAAAGAAAAAAAATGGCTGCT 91 Query 60 TCATCTTCCTCTTTCACTCTCTGTAATCACACCACACTTCACACTCTCCCTCAGAGAAAG 119 |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct 92 TCATCTTCCTCTTTCACTCTCTGTAATCACACCACACTTCGTACTCTCCCTCTGAGAAAG 151 Query 120 ACCCTTGTCACCAAAACCCATTTTTCCGTTCCCACAAAATCATCAGAATCTAATTTCTTT 179 |||||||||||||||||||| ||||| |||||||||||||||||||||||||| |||||| Sbjct 152 ACCCTTGTCACCAAAACCCAATTTTCAGTTCCCACAAAATCATCAGAATCTAACTTCTTT 211 Query 180 GGCTCCAGACTCACTCACTCGTCGTATCTCTCCCCAGTCTCTTCCTCTTCTCTCAAAAGC 239 ||||||| |||||||||||| |||||| ||||||||||||||||||||||||||||| || Sbjct 212 GGCTCCACACTCACTCACTCATCGTATATCTCCCCAGTCTCTTCCTCTTCTCTCAAAGGC 271 Query 240 TTAATCTTTGCC-A--AGGTTAACAAGGGTCAGGCTGCACCAGACTTCACATTGAAGGAT 296 |||||||||||| | ||||||||||||||||||||||||||||||||||| | |||||| Sbjct 272 TTAATCTTTGCCAAGCAGGTTAACAAGGGTCAGGCTGCACCAGACTTCACACTAAAGGAT 331 Query 297 CAGAACGGAAAGCCGGTGAGCCTCAAAAAGTATAAAGGGAAGCCTGTTGTTCTCTACTTC 356 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 332 CAAAACGGAAAGCCGGTGAGCCTCAAAAAGTATAAAGGGAAGCCTGTTGTTCTCTACTTC 391 Query 357 TACCCTGCAGATGAAACCCCTGGCTGCACCAAACAGGCTTGTGCTTTCAGAGACTCTTAT 416 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 392 TACCCTGCAGATGAAACCCCTGGCTGCACCAAGCAGGCTTGTGCTTTCAGAGACTCTTAT 451 Query 417 GAGAAATTCAAGAAAGCCGGTGCAGAGGTCATTGGGATTAGTGGTGATGACTCTGCTTCT 476 ||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||| Sbjct 452 GAGAAATTCAAGAAAGCTGGTGCAGAGGTCATTGGCATTAGTGGAGATGACTCTGCTTCT 511 Query 477 CACAAGGCGTTTGCAAGCAAATACAAACTCCCGTATACATTGTTAAGCGACGAAGGGAAT 536 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 512 CACAAGGCGTTTGCAAGCAAATACAAACTACCGTATACATTGTTAAGCGACGAAGGGAAT 571 Query 537 AAGGTGAGAAAAGATTGGGGAGTACCAGGAGACTTGTTTGGGGCATTGCCAGGGAGACAA 596 ||||||||||||||||||||||| || |||||| ||||||| ||||||||||||||||| Sbjct 572 AAGGTGAGAAAAGATTGGGGAGTGCCTGGAGACCTGTTTGGAGCATTGCCAGGGAGACAG 631 Query 597 ACTTACGTCCTTGACAAAAACGGTGTTGTTCAGCTCATCTACAACAACCAGTTCCAGCCT 656 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 632 ACTTACGTTCTTGACAAAAACGGTGTTGTTCAGCTCATCTACAACAACCAGTTCCAGCCT 691 Query 657 GAGAAACACATCGACGAGACCTTGAAGTTTCTTAAAGCTGCTTGATCATTCTCTCTTTCT 716 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 692 GAGAAACACATCGACGAGACCTTGAAGTTTCTCAAAGCTGCTTGATCATTCTCTCTTTCT 751 Query 717 CTT--------------ATGCATGTCTCATGTCTGGCTCCATGA--CCTT--CC--C--A 754 ||| |||||||||||||||||| |||||||| || | || | | Sbjct 752 CTTCTTTCTCTTCTTTCATGCATGTCTCATGTCTGTCTCCATGAGACCATGACCTTCTTA 811 Query 755 TACTGTTTCTTTTGATTATGAATTTTCAATAATACCATGTTATACCAATGAGAAGAGAGT 814 || ||||||| |||| ||||||||||||||||||||||||||||||||||||||| |||| Sbjct 812 TATTGTTTCTGTTGAGTATGAATTTTCAATAATACCATGTTATACCAATGAGAAGGGAGT 871 Query 815 TGGCTTTGGTCTGGTAAAAAGATCACAACGGGATAAGTATTGAAGAGTGGTTAAAATGTT 874 |||||||||||| ||| |||||||||||| ||||||||| ||||| |||||||||||||| Sbjct 872 TGGCTTTGGTCTAGTACAAAGATCACAACAGGATAAGTACTGAAGTGTGGTTAAAATGTT 931 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 42699024950 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5