BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg484493 Length=1395 Score E Sequences producing significant alignments: (Bits) Value AT3G27090.1 | Symbols: | DCD (Development and Cell Death) doma... 2161 0.0 > AT3G27090.1 | Symbols: | DCD (Development and Cell Death) domain protein | chr3:9989540-9991826 FORWARD LENGTH=1440 Length=1440 Score = 2161 bits (1170), Expect = 0.0 Identities = 1330/1406 (95%), Gaps = 16/1406 (1%) Strand=Plus/Plus Query 1 TTCTTCTCTCACATTCTCTCTTCTGACGTGTTT-CCTTCTTCGGTTTCTCATCCTCACGT 59 |||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 10 TTCTTCTCTCTCATTCTCTCTTCTGACGTGTTTCCCTTCTTCGGTTTCTCATCCTCACGT 69 Query 60 CCGTCGGATTTTGAGGAAACGAAGAAGAA-AAGGTCTGTC-TCTTATGGTAGAGTTTTGA 117 ||| ||||||| ||||||||||||||||| ||| | | | | || |||||| Sbjct 70 CCGCCGGATTTCGAGGAAACGAAGAAGAAGAAGAAC-AACAAC-AACAAAAGCCTTTTGA 127 Query 118 GTTATGGACAGCTTCTGGCAATTGGGTGATGAGCTACGAGGTCAAACGAGAGCATCAGAG 177 | ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| Sbjct 128 GATATGGACAGCTTCTGGCAATTAGGTGATGAGCTACGAGGTCAGACGAGAGCATCAGAG 187 Query 178 GATCACAAATGGTCTACTGTTGCAACGAAGCTAGCCGAGCAAACTAGAATGAAAGGGGAG 237 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 188 GATCACAAATGGTCTACTGTTGCAACGAAGCTAGCTGAGCAAACTAGAATGAAAGGGGAG 247 Query 238 AGGATGAACAATCTAGATCTCTCCAAAGGTTACACTGAGTTCAGGCCAAGTGACAAGTTT 297 |||||||||||||| |||||||||||||||||||||||||| || |||||||| || || Sbjct 248 AGGATGAACAATCTTGATCTCTCCAAAGGTTACACTGAGTTTAGACCAAGTGAGAAATTC 307 Query 298 AGTTTCCAAGAGAACAATCTTAACTTCAACATGTTGAATTTGGATGGCAAATTTGGTGAA 357 |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 308 AGTTTCCAGGAGAACAATCTTAACTTCAACATGTTGAATTTGGATGGTAAATTTGGTGAA 367 Query 358 GGCATTATGGGGAAGACGTCGATGCAGAGCAATGTTTATAATATGAATACTGTTTTCCAG 417 |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 368 AGCATCATGGGGAAGACTTCGATGCAGAGCAATGTTTATAATATGAATACTGTTTTCCAG 427 Query 418 AAGAATGAGTTTAAGAGTGGAGGGAACACGAAAGTTAACAAGTATAATGGTAATGTTGTT 477 |||||||| |||||||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct 428 AAGAATGACTTTAAGAGTGGAGGCAACATGAAAGTTAACAAGTATAATGGTAATGTTGTT 487 Query 478 ACTAACAAGGAGATGAGTAACAACAAACATAACAAC-A--GCAATGATAATGGGAATATG 534 |||||||||||||||| |||||||||||||||||| | |||||||||||||||||||| Sbjct 488 GCTAACAAGGAGATGAGCAACAACAAACATAACAACAACTGCAATGATAATGGGAATATG 547 Query 535 AATTTGGCTGTTGACAAGAGGTTTAAAACCTTGCCTGCTTCGGAGACACTTCCGAGGAAC 594 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 548 AATTTGGCTGTTGACAAGAGGTTTAAAACCTTGCCTGCTTCGGAGACTCTTCCGAGGAAT 607 Query 595 GAAGTTCTTGGTGGTTACATCTTTGTTTGCAACAATGATACCATGCAGGAGGATATGAAA 654 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 608 GAAGTTCTTGGTGGTTACATCTTTGTTTGCAACAATGATACTATGCAGGAGGATATGAAA 667 Query 655 CGTCACCTCTTTGGTTTACCTCCAAGATACAGAGACTCTGTTCGAGCTATAACACCTGGA 714 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 668 CGTCACCTCTTTGGTTTACCTCCAAGATACAGAGACTCTGTTCGAGCTATAACACCTGGA 727 Query 715 TTGCCTCTGTTTCTCTACAACTACACCACTCACCAGCTCCATGGTATCTTTGAGGCAACA 774 |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 728 TTGCCTCTGTTTCTTTACAACTACACCACTCACCAGCTTCATGGTATCTTTGAGGCAACA 787 Query 775 ACTTTTGGAGGTACTAATATTGATGCTACTGCTTGGGAAGACAAAAAGTGCAAAGGAGAG 834 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 788 ACTTTTGGAGGTACTAATATTGATGCTACTGCTTGGGAAGACAAAAAGTGCAAAGGAGAG 847 Query 835 TCAAGGTTTCCGGCTCAGGTAAGGATCAGAGTGAGGAAAATCTGCAAAGCCTTGGAAGAG 894 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 848 TCAAGGTTTCCGGCTCAGGTAAGGATCAGAGTGAGGAAAATCTGCAAAGCCTTGGAAGAG 907 Query 895 GACTCCTTCAGGCCAGTTCTTCACCACTATGATGGTCCAAAGTTCCGCCTTGAGCTCTCT 954 ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| Sbjct 908 GACTCCTTCAGGCCAGTACTTCACCACTATGATGGTCCAAAATTCCGCCTTGAGCTCTCT 967 Query 955 GTTCCTGAGACATTGGATCTGCTAGACCTCTGCGAACAAGCTGGTTCTGCATAAGCCGAA 1014 |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct 968 GTTCCTGAGACATTGGATCTGCTAGATCTTTGCGAACAAGCTGGTTCTGCATAAGCCGAA 1027 Query 1015 ACGATCAACCTTGCAATGCTGCGTTGCGAAGAGGGTG--GTTTTGTATGAAATCTATCTA 1072 ||||||||||||||||||| |||||| ||||||| | ||||||||||||||||||||| Sbjct 1028 ACGATCAACCTTGCAATGCCACGTTGCAAAGAGGGGGATGTTTTGTATGAAATCTATCTA 1087 Query 1073 TATATATGTATTACCTACCATAAGAGCGTAAGCTTTTGGGATTTAGTTAAGAGTCGGATT 1132 ||||| ||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 1088 TATAT--GTAAGACCTACCGTAAGAGCGTAAGCTTTTGGGATTTAGTTAAGAGTCGGATT 1145 Query 1133 CAAATGTATGTTTACTAAGAAGGGATGAGAGTATGTGTGGTCTTAAGGCAAGCAAAAGAG 1192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1146 CAAATGTATGTTTACTAAGAAGGGATGAGAGTATGTGTGGTCTTAAGGCAAGCAAAAGAG 1205 Query 1193 CGAAGAGGCTCTGCCGAATAAGCGACTACTCTCGTTC-gtgtcatgtctgatgtgtgatt 1251 |||||||||||||||||||||||||||||||| |||| ||||| |||||||||||||| | Sbjct 1206 CGAAGAGGCTCTGCCGAATAAGCGACTACTCTTGTTCTGTGTCGTGTCTGATGTGTGAGT 1265 Query 1252 gtgtgtctgtgtttgtgAGAGATTCGATACTCTTTGAAACAAAGATTTATGTAGAAGAAT 1311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1266 GTGTGTCTGTGTTTGTGAGAGATTCGATACTCTTTGAAACAAAGATTTATGTAGAAGAAT 1325 Query 1312 ATAGAGA--GAAAGAGAGACTATAAACAGAGCTAAAAAATGATTTGAGCTACTGTTTGTG 1369 ||||||| |||||| |||||||||||||| |||||||||| |||||||||||||||| Sbjct 1326 ATAGAGAAAGAAAGACT-ACTATAAACAGAGCCAAAAAATGATGTGAGCTACTGTTTGTG 1384 Query 1370 TTTGCTTGTGTAAGGAGAAAACAAAT 1395 ||||||||||||||| ||||||||| Sbjct 1385 CTTGCTTGTGTAAGGATAAAACAAAT 1410 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 68724546105 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5