BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg484500
Length=2715
Score E
Sequences producing significant alignments: (Bits) Value
AT3G27170.1 | Symbols: CLC-B, ATCLC-B | chloride channel B | ch... 4318 0.0
AT5G40890.1 | Symbols: ATCLC-A, CLC-A, CLCA, ATCLCA | chloride ... 1954 0.0
AT3G27180.1 | Symbols: | S-adenosyl-L-methionine-dependent met... 505 1e-141
> AT3G27170.1 | Symbols: CLC-B, ATCLC-B | chloride channel B |
chr3:10024017-10027198 FORWARD LENGTH=2750
Length=2750
Score = 4318 bits (2338), Expect = 0.0
Identities = 2600/2726 (95%), Gaps = 19/2726 (1%)
Strand=Plus/Plus
Query 1 CCACCCAGAAGTGGTTTGTTAACAGAGAAAGCTCTATAAGAACCTTAAAAA-GTTCTGTT 59
||||| ||||||| ||||||||||||||||||||| ||||||||||||||| ||||||||
Sbjct 15 CCACCAAGAAGTGCTTTGTTAACAGAGAAAGCTCTGTAAGAACCTTAAAAAGGTTCTGTT 74
Query 60 GCAGAGGTTCCGACCAAAAGCCAGAGTTTCATCTTTATGTGATCAGAGAC--AGAGATGG 117
|||||||||||||||||||||||||||||||||||||||||| || |||| ||||||||
Sbjct 75 GCAGAGGTTCCGACCAAAAGCCAGAGTTTCATCTTTATGTGAACAAAGACAGAGAGATGG 134
Query 118 TGGAAGAAGATTTAAACCAGATTGGTGGCAATAGTAATTACAATGGAGAAGCA---GACC 174
|||||||||||||||||||||||||||| |||||||||||||||||||||| | ||||
Sbjct 135 TGGAAGAAGATTTAAACCAGATTGGTGGTAATAGTAATTACAATGGAGAAGGAGGCGACC 194
Query 175 CAGAGAGCAACACACTTAACCAACCTCTGGTTAAGGCTAATCGAACACTTTCTTCAACTC 234
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 195 CAGAGAGCAACACACTTAACCAACCTCTAGTTAAGGCTAATCGAACACTTTCTTCAACTC 254
Query 235 CTCTTGCCTTGGTTGGTGCCAAGGTTTCCCATATCGAAAGCTTGGACTATGAAATAAACG 294
| ||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 255 CACTTGCTTTGGTTGGTGCCAAAGTTTCCCATATCGAAAGCTTGGACTATGAAATAAACG 314
Query 295 AAAACGATCTGTTTAAGCATGATTGGAGAAAAAGATCAAAGGCACAAGTACTTCAATACG 354
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 315 AGAACGATCTGTTTAAGCATGATTGGAGAAAAAGATCAAAGGCACAAGTACTTCAATACG 374
Query 355 TGTTCCTGAAATGGACGTTAGCTTGTCTTGTTGGTCTTTTCACTGGTTTAATCGCTACTC 414
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 375 TGTTCTTGAAATGGACGTTAGCTTGTCTTGTTGGTCTTTTCACTGGTTTAATCGCTACTC 434
Query 415 TCATCAACTTAGCTGTTGAAAACATCGCCGGCTACAAGCTTTTAGCCGTTGGTCACTTCC 474
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 435 TCATCAACTTAGCTGTTGAAAACATCGCCGGCTATAAGCTTTTAGCCGTTGGTCACTTCC 494
Query 475 TCACCCAAGAAAGATATGTTACAGGTCTGATGGTGCTTGCTGGGGCGAATTTGGGACTGA 534
|||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 495 TCACTCAAGAAAGATATGTTACAGGTCTGATGGTGCTTGTTGGGGCGAATTTGGGACTGA 554
Query 535 CGTTGGTGGCGTCTGTGCTTTGTGTTTGCTTTGCTCCTACCGCGGCTGGACCTGGAATTC 594
||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| |
Sbjct 555 CGTTGGTGGCGTCTGTGCTTTGTGTGTGCTTTGCTCCTACGGCGGCTGGACCTGGAATCC 614
Query 595 CTGAGATCAAAGCTTATCTTAATGGCGTTGATACTCCCAACATGTTTGGTGCTACTACTA 654
||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||
Sbjct 615 CTGAGATCAAAGCTTATCTTAATGGTGTAGATACTCCCAACATGTTTGGTGCTACTACTA 674
Query 655 TGATCGTTAAGATTGTTGGAAGCATTGGAGCGGTTGCAGCTGGACTTGATCTGGGTAAAG 714
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 675 TGATCGTTAAGATTGTTGGAAGCATTGGAGCGGTTGCAGCTGGACTTGATCTAGGTAAAG 734
Query 715 AGGGTCCTCTGGTTCACATTGGAAGCTGCATAGCTTCTTTGCTTGGACAAGGCGGAACAG 774
|||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 735 AGGGTCCTCTAGTTCACATTGGAAGCTGCATAGCTTCTTTGCTTGGACAAGGTGGAACAG 794
Query 775 ACAACCACCGTATCAAGTGGCGATGGCTTCGTTACTTCAACAACGATAGAGACCGCAGGG 834
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 795 ACAACCACCGTATCAAGTGGCGGTGGCTTCGTTACTTCAACAACGATAGAGACCGCAGGG 854
Query 835 ATCTGATTACATGTGGTTCAGCTGCTGGAGTCTGTGCAGCCTTCAGGTCACCTGTTGGAG 894
|||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||
Sbjct 855 ATCTGATTACATGTGGCTCAGCTGCAGGAGTGTGTGCAGCCTTCAGGTCACCTGTTGGAG 914
Query 895 GTGTGCTTTTCGCCCTTGAGGAAGTGGCCACTTGGTGGAGAAGCGCCTTATTGTGGCGGA 954
|||| ||||||||||| |||||||| || |||||||||||||| ||||||||||||||||
Sbjct 915 GTGTACTTTTCGCCCTCGAGGAAGTTGCTACTTGGTGGAGAAGTGCCTTATTGTGGCGGA 974
Query 955 CTTTCTTCAGTACAGCGGTCGTTGTGGTGGTTCTAAGAGAGTTCATAGAGATCTGCAATT 1014
|||||||||| |||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct 975 CTTTCTTCAGCACAGCGGTTGTTGTGGTTGTTCTAAGAGAGTTCATAGAGATCTGCAATT 1034
Query 1015 CAGGGAAGTGTGGGTTGTTTGGAAAAGGAGGTCTTATCATGTTTGATGTGAGTCACGTAA 1074
||||||||||||||||||||||||||||||| || |||||||||||||||||||| ||||
Sbjct 1035 CAGGGAAGTGTGGGTTGTTTGGAAAAGGAGGGCTAATCATGTTTGATGTGAGTCATGTAA 1094
Query 1075 CTTATACTTACCATGTAACTGACATAATCCCTGTCATGTTGATTGGTGTAATCGGTGGAA 1134
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1095 CTTATACTTACCATGTAACTGATATAATCCCTGTCATGTTGATTGGTGTAATCGGTGGAA 1154
Query 1135 TTCTTGGGAGCCTCTATAATCA-CTTCCTGCATAAAGTTCTCCGGCTTTACAATCTCATC 1193
||||||||||||| || ||||| ||| ||||||||||||||| |||||||||||||||||
Sbjct 1155 TTCTTGGGAGCCTGTACAATCATCTT-CTGCATAAAGTTCTCAGGCTTTACAATCTCATC 1213
Query 1194 AACGAGAAGGGTAAGATCCACAAGGTGCTTCTCAGTCTTACAGTATCACTCTTCACATCG 1253
|| ||||||||||||||||| |||||||||||||||||||||||||||||||| |||||
Sbjct 1214 AATGAGAAGGGTAAGATCCATAAGGTGCTTCTCAGTCTTACAGTATCACTCTTTACATCT 1273
Query 1254 GTTTGCCTTTACGGTCTTCCTTTCCTCGCGAAATGCAAGCCTTGTGACCCCTCGATAGAT 1313
||||||||||| || ||||||||| | |||||||||||||||||||||||||||||||||
Sbjct 1274 GTTTGCCTTTATGGCCTTCCTTTCTTAGCGAAATGCAAGCCTTGTGACCCCTCGATAGAT 1333
Query 1314 GAGATCTGCCCGACCAATGGAAGATCGGGAAACTTCAAACAGTTCAACTGCCCAAAAGGT 1373
||||| |||||||| |||||||||||||| ||||||||||||||| | ||||| ||||||
Sbjct 1334 GAGATATGCCCGACGAATGGAAGATCGGGTAACTTCAAACAGTTCCATTGCCCTAAAGGT 1393
Query 1374 TACTACAATGATTTAGCTACTCTGCTTCTCACCACCAACGATGACGCTGTCAGAAACCTT 1433
|||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1394 TACTACAATGATCTAGCTACTCTGCTTCTCACCACCAACGATGATGCTGTCAGAAACCTT 1453
Query 1434 TTCTCTTCCAACACCCCCAATGAGTTTGGCATGGGTTCCCTGTGGATATTCTTTGTGCTC 1493
|||||||||||||| |||||||||||||| ||||||||||| |||||||||||||||||
Sbjct 1454 TTCTCTTCCAACACTCCCAATGAGTTTGGTATGGGTTCCCTTTGGATATTCTTTGTGCTA 1513
Query 1494 TACTGCATCTTGGGGCTTTTCACATTTGGAATTGCAACACCGTCTGGTCTCTTCCTTCCC 1553
||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||
Sbjct 1514 TACTGCATCTTGGGGCTTTTCACATTTGGTATTGCAACACCGTCTGGTCTCTTCCTCCCC 1573
Query 1554 ATCATCCTCATGGGTGCTGCATATGGCCGAATGCTTGGCGCTGCGATGGGATCCTACACA 1613
|||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||
Sbjct 1574 ATCATCCTCATGGGTGCTGCATATGGCCGAATGCTTGGCGCTGCAATGGGATCATACACA 1633
Query 1614 AGTATTGACCAAGGGCTTTATGCTGTCCTTGGTGCAGCTGCACTCATGGCTGGATCGATG 1673
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1634 AGTATTGACCAAGGGCTTTATGCTGTCCTTGGTGCAGCTGCACTCATGGCTGGATCGATG 1693
Query 1674 AGAATGACTGTGTCACTCTGTGTTATATTCCTCGAACTCACCAACAACCTTCTTTTGCTT 1733
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1694 AGAATGACTGTGTCACTCTGTGTTATATTCCTTGAACTCACCAACAACCTTCTTTTGCTT 1753
Query 1734 CCCATTACAATGATTGTGCTTCTGATTGCCAAAACTGTGGGAGACAGCTTCAACCCAAGT 1793
|| || || ||||| ||||||||||| ||||||||||||||||||||||| ||||| |||
Sbjct 1754 CCTATAACGATGATCGTGCTTCTGATAGCCAAAACTGTGGGAGACAGCTTTAACCCGAGT 1813
Query 1794 ATCTATGACATCATCTTGCATCTAAAGGGCTTACCTTTCTTAGAAGCAAATCCAGAGCCG 1853
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1814 ATATATGACATCATCTTGCATCTAAAGGGCTTACCTTTCTTAGAAGCAAATCCAGAGCCG 1873
Query 1854 TGGATGAGGAACCTCAGTGTTGGTGAGCTTGGTGATGCTAAGCCCCCGGTTGTAACCCTG 1913
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1874 TGGATGAGGAACCTCACCGTTGGTGAGCTTGGTGATGCTAAGCCCCCGGTTGTAACCCTG 1933
Query 1914 CAAGGCGTAGAAAAGGTTTCAAAAATAGTTGATGTGCTAAAGAACACGACCCATAATGCA 1973
||||| || |||||||||||||| |||||||||||||||||||||||||| |||||||||
Sbjct 1934 CAAGGTGTTGAAAAGGTTTCAAATATAGTTGATGTGCTAAAGAACACGACGCATAATGCA 1993
Query 1974 TTCCCTGTTTTAGATAAAGCAGAAGTACCTCAAGTGGGTCTACCAACTGGTGCTACAGAA 2033
||||||||||||||| |||||||||||||||||||||||||| ||||||| |||||||||
Sbjct 1994 TTCCCTGTTTTAGATGAAGCAGAAGTACCTCAAGTGGGTCTAGCAACTGGGGCTACAGAA 2053
Query 2034 CTCCACGGGTTGATCCTGAGAGCGCACCTCGTTAAAGTTCTGAAAAAGAGATGGTTCTTG 2093
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2054 CTCCACGGGTTGATCTTGAGAGCGCACCTCGTTAAAGTTCTGAAAAAGAGATGGTTCTTG 2113
Query 2094 ACAGAGAAAAGAAGAACAGAAGAGTGGGAGGTCAGGGAGAAGTTTCCATGGGATGAATTG 2153
|||||||||||||||||||| |||||||||||||| || |||||||||||||||||||||
Sbjct 2114 ACAGAGAAAAGAAGAACAGAGGAGTGGGAGGTCAGAGAAAAGTTTCCATGGGATGAATTG 2173
Query 2154 GCTGAGAGAGAAGACAACTTTGACGACGTGGCCATCACAAGCGCTGAAATGGAAATGTAT 2213
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2174 GCTGAAAGAGAAGACAACTTTGACGACGTGGCCATCACAAGCGCTGAAATGGAAATGTAT 2233
Query 2214 GTCGATCTTCATCCTCTTACCAACACAACACCTTACACAGTCATGGAGAACATGTCTGTG 2273
||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||
Sbjct 2234 GTCGATCTTCATCCTCTCACCAACACAACACCTTACACAGTCATGGAGAACATGTCAGTG 2293
Query 2274 GCCAAGGCTTTAGTACTATTCCGGCAAGTGGGACTCCGGCATTTGCTTATTGTTCCCAAG 2333
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 2294 GCCAAGGCTTTAGTACTTTTCCGGCAAGTGGGACTCCGGCATTTGCTTATTGTTCCCAAG 2353
Query 2334 ATTCAAGCCTCGGGAATGTGTCCTGTGGTAGGGATCTTAACCAGGCAGGATCTAAGGGCA 2393
||||||||||| |||||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct 2354 ATTCAAGCCTCAGGAATGTGTCCTGTGGTAGGGATCTTAACCAGACAGGACCTAAGGGCA 2413
Query 2394 TACAACATTCTACAAGCCTTTCCTCTATTGGAAAAATCCAAAAGTGGAAA-AGCACATTG 2452
|||||||||||||||||||||||||| ||||||||||||||| ||||||| | |||||||
Sbjct 2414 TACAACATTCTACAAGCCTTTCCTCTCTTGGAAAAATCCAAAGGTGGAAAGA-CACATTG 2472
Query 2453 AA-GAGCTACTTACTTTGTTGTAA-AATATCGCTTGCAGCCTTGTGTTTTTCTTCTCATT 2510
|| ||||||||| ||| ||||||| || ||||||||||||||||||||||||||||||||
Sbjct 2473 AAAGAGCTACTTGCTT-GTTGTAAGAA-ATCGCTTGCAGCCTTGTGTTTTTCTTCTCATT 2530
Query 2511 CTTGAAGATGTATCTGTCCAGTTTTGCACTTCTTCTTCATATCCAACAGAAGTTGATAAG 2570
||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 2531 CTTAAAGATGTATCTGTCCAGTTTTGCACTTTTTCTTCATATCCAACAGAAGTTGATAAG 2590
Query 2571 ATAAATATTGCAATGACACAAAAAAGAGAGAAC-CATATCGCGTTATCAACAGGAACAGA 2629
|||||||||||||||||||||||| |||||| | |||||| | |||||||||||||||||
Sbjct 2591 ATAAATATTGCAATGACACAAAAA-GAGAGA-CTCATATCTCCTTATCAACAGGAACAGA 2648
Query 2630 GCAAAACTGTTTTCTCATCTATTAGATGGTCTCCTAAACTTCTGAAGTTCAAGTGTTACA 2689
|||||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 2649 GCAAAACTGTTT-C-CATCTATTAGATGGTCTCCTAAACCTCTGAAGTTCAAGTGTTACA 2706
Query 2690 GACATTAACTAATGAGATTCTTGTGA 2715
||||||||||||| ||| || |||||
Sbjct 2707 GACATTAACTAATAAGAGTCCTGTGA 2732
> AT5G40890.1 | Symbols: ATCLC-A, CLC-A, CLCA, ATCLCA | chloride
channel A | chr5:16381346-16385319 REVERSE LENGTH=2947
Length=2947
Score = 1954 bits (1058), Expect = 0.0
Identities = 1958/2385 (82%), Gaps = 92/2385 (4%)
Strand=Plus/Plus
Query 104 AGAGACAGAGAT-GGTGGAAGAAGATTTAAAC---CAGATTGGTGGCAATAGTAATTACA 159
|||||||| || | |||| |||||| |||| |||||| || |||||||||||||
Sbjct 307 AGAGACAGCTATCGATGGATGAAGATGGAAACTTGCAGATTAGT---AATAGTAATTACA 363
Query 160 ATGGAGAAGCAGACCCAG-AG----AG-CAAC-ACAC-TT-AACCAACCTCTGGTTAAGG 210
||||||||| ||| || || || ||| |||| || || ||||| ||| |||| |
Sbjct 364 ATGGAGAAGAAGAAGGAGAAGATCCAGAGAACAACACTTTGAATCAACCACTGCTTAA-G 422
Query 211 CTA-ATCGAACACTTTCTTCAACTCCTCTTGCCTTGGTTGGTGCCAAGGTTTCCCATATC 269
| || |||| |||||||||||||||||||| ||||| |||||||||||||| || |||
Sbjct 423 AGACATAGAACTCTTTCTTCAACTCCTCTTGCTTTGGTCGGTGCCAAGGTTTCACACATC 482
Query 270 GAAAGCTTGGACTATGAAATAAACGAAAACGATCTGTTTAAGCATGATTGGAGAAAAAGA 329
|| || || || |||||||||||||| || |||||||| |||||||| ||||||| |||
Sbjct 483 GAGAGTTTAGATTATGAAATAAACGAGAATGATCTGTTCAAGCATGACTGGAGAAGCAGA 542
Query 330 TCAAAGGCACAAGTACTTCAATACGTGTTCCTGAAATGGACGTTAGCTTGTCTTGTTGGT 389
||||| |||||||| |||||||| | ||| | |||||||| ||||||||||||||||||
Sbjct 543 TCAAAAGCACAAGTGTTTCAATACATATTCTTAAAATGGACATTAGCTTGTCTTGTTGGT 602
Query 390 CTTTTCACTGGT-TTAATCGCTACTCTCATCAA-CTTAGCTGTTGAAAACATCGCCGGCT 447
|| ||||||||| || ||||||||||||||||| ||| ||||| |||||||||||||| |
Sbjct 603 CTCTTCACTGGTCTT-ATCGCTACTCTCATCAACCTT-GCTGTCGAAAACATCGCCGGTT 660
Query 448 ACAAGCTTTTAGCCGTTGGTC-ACTTCCTCACCCAAGA-AAGATATGTTACAGGTCTGAT 505
|||| ||| | ||||| || | ||| | | | ||||| | | | || |||||||||||
Sbjct 661 ACAAACTTCTCGCCGTCGG-CTACTACATTGCTCAAGATAGGTTTTG-GACAGGTCTGAT 718
Query 506 GGTGC-TTGCTGGGGCGAATTTGGGACTGACGTTGGTGGCGTCTGTGCTTTG-TGTTTGC 563
||| | || | |||||||||||||| ||||| ||||||||| | || | ||| ||||| |
Sbjct 719 GGT-CTTTACGGGGGCGAATTTGGGTCTGACTTTGGTGGCGACAGTAC-TTGTTGTTTAC 776
Query 564 TTTGCTCCTACCGCGGCTGGACCTGGAATTCCTGAGATCAAAGCTTATCTTAATGGCGTT 623
||||||||||| |||||||| || || || |||||||| |||||||| ||||||||| ||
Sbjct 777 TTTGCTCCTACGGCGGCTGGTCCGGGGATCCCTGAGATTAAAGCTTACCTTAATGGCATT 836
Query 624 GATACTCCCAACATGTTTGGTGCTACTACTATGATCGTTAAGATTGTTGGAAGCATTGGA 683
|| |||||||| ||||||||| ||| || ||||| ||||||||||||||||| ||||||
Sbjct 837 GACACTCCCAATATGTTTGGTTTTACCACCATGATGGTTAAGATTGTTGGAAGTATTGGA 896
Query 684 GCGGTTGCAGCTGGACTTGATCTGGGTAAAG-AGGGTCC-TCTGGTTCACATTGGAAGCT 741
||||||||||||||||||||||| ||||||| |||| || | ||||||| |||||||| |
Sbjct 897 GCGGTTGCAGCTGGACTTGATCTTGGTAAAGAAGGG-CCAT-TGGTTCATATTGGAAGTT 954
Query 742 GCATAGCTTCTTTGCTTGGACAAGGCGGAACAGACAACCACCGTATCAAGTGGCGATGGC 801
||||||||||||||||||| ||||| || |||| || ||| | ||||| ||| ||||||
Sbjct 955 GCATAGCTTCTTTGCTTGGTCAAGGTGGTCCAGATAATCACAGAATCAAATGGAGATGGC 1014
Query 802 TTCGTTACTTCAACAACGATAGAGACCGCAGGGATCTGATTACATGTGGTTCAG-CTGCT 860
||||||||||||||||||||||||| || || ||||| ||||||||||| || | || ||
Sbjct 1015 TTCGTTACTTCAACAACGATAGAGATCGAAGAGATCTTATTACATGTGGATCTGCCT-CT 1073
Query 861 GGAGTCTGTGCAGCCTTCAGGTCACCTGTTGGAGGTGTGCTTTTCGCCCTTGAGGAAGTG 920
||||| ||||| || ||||||||||| || ||||| || |||||||| |||||||||||
Sbjct 1074 GGAGTATGTGCTGCTTTCAGGTCACCAGTAGGAGGAGTACTTTTCGCTCTTGAGGAAGTC 1133
Query 921 GCCACTTGGTGGAGAAGCGCCT-TATTGTGGCGGACTTTCTTCAGTACAGCGGTCGTTGT 979
|| || ||||||||||||| || | |||||| | || |||||||||||||| || || ||
Sbjct 1134 GCTACGTGGTGGAGAAGCG-CTCTCTTGTGGAGAACATTCTTCAGTACAGCCGTTGTGGT 1192
Query 980 GGTGGT-TCTAAGAGAGTTCATAGAGATCTGCAATTCAGGGAAGTGTGG-GTTGTTTGGA 1037
||| || | |||||| |||||| ||||| || || || ||||| || || || || ||
Sbjct 1193 GGTTGTAT-TAAGAGCGTTCATTGAGATTTGTAACTCCGGGAAATGCGGACTT-TTCGGC 1250
Query 1038 AAAGGAGGTCTTATCATGTTTGATGTGAGTCACGTA-ACTTATACTTACCATGTAACTGA 1096
|||||| || || ||||| ||||||||||| ||| | | || ||||| | | | ||
Sbjct 1251 TCAGGAGGACTCATTATGTTCGATGTGAGTCATGTAGAGGT-TAGGTACCACGCAGCAGA 1309
Query 1097 CATAATCCCTGTCATGTTGATTGGTGTAATCGGTGGAATTCTTGGGAGCCTCTATAATCA 1156
|||||||| |||| |||||||| || | ||||| |||||||| ||| | || |||||
Sbjct 1310 TATAATCCCAGTCACATTGATTGGAGTCTTTGGTGGCATTCTTGGAAGCTTGTACAATCA 1369
Query 1157 -CTTCCTGCATAAAGTTCTCCGGCTTTACAATCTCATCAACGAGAAGGGTAAGATCCACA 1215
||| |||||||||||||||||||||||||||||||||||| ||||||| ||||| || |
Sbjct 1370 TCTT-CTGCATAAAGTTCTCCGGCTTTACAATCTCATCAACCAGAAGGGAAAGATTCATA 1428
Query 1216 AGGTGCTTCTCAGTCTTACAGTATCACTCTTCACATCGGTTTGCCT-TTACGGTCTTCCT 1274
|||||||||| |||||| ||||| || |||||||| |||||| | || ||||||||||
Sbjct 1429 AGGTGCTTCTAAGTCTTGGGGTATCTCTATTCACATCAGTTTGCTTGTT-CGGTCTTCCT 1487
Query 1275 TTCCTCGCGAAATGCAAGCCTTGTGACCCCTCGATAGATGAGATCTGCCCGACCAATGGA 1334
||| | ||| |||||||||||||||| || || ||||| ||||| || || || || |||
Sbjct 1488 TTCTTAGCGGAATGCAAGCCTTGTGATCCTTCTATAGACGAGATATGTCCAACAAACGGA 1547
Query 1335 AGATCGGGAAACTTCAAACAGTTCAACTGCCCAAAAGGTTACTACAATGATTTAGCTACT 1394
||||| ||||| ||||| || |||||||| ||||| ||||| ||||| ||| || | |||
Sbjct 1548 AGATCAGGAAATTTCAAGCAATTCAACTGTCCAAATGGTTATTACAACGATCTATCCACT 1607
Query 1395 CTGCTTCTCACCACCAACGATGACGCTGTCAGAAACCTTTTCTCTTCCAACACCCCCAAT 1454
||||||||||| ||||| ||||| || ||||||||| |||||||||| ||||| || |||
Sbjct 1608 CTGCTTCTCACAACCAATGATGATGCAGTCAGAAACATTTTCTCTTCAAACACTCCTAAT 1667
Query 1455 GAGTTTGGCATGGGTTCCCTGTGGATATTCTTTGTGC-TCTACTGCATCTTGGGGCTTTT 1513
||||||||||||| ||| || ||||||||||||| || |||||||||| ||||| ||| |
Sbjct 1668 GAGTTTGGCATGGTTTCTCTCTGGATATTCTTTG-GCCTCTACTGCATTTTGGGTCTTAT 1726
Query 1514 CACATTTGGAATTGCAACACCGTCTGGTCTCTTCCTTCCCATCATCCTCATGGGTGCTGC 1573
||||| || || || |||||||| ||||||||||| || || |||||||||||| ||||
Sbjct 1727 AACATTCGGTATAGCGACACCGTCGGGTCTCTTCCTACCGATTATCCTCATGGGTTCTGC 1786
Query 1574 ATATGGCCGAATGCTTGGCGCTGCGATGGGATCCTACACAAGTATTGACCAAGGGCTTTA 1633
||| || | ||||| ||| | || ||||| || ||||||| || || |||||||||||
Sbjct 1787 ATACGGTAGGATGCTAGGCACAGCAATGGGGTCTTACACAAACATAGATCAAGGGCTTTA 1846
Query 1634 TGCTGTCCTTGGTGCAGCTGCACTCATGGCTGGATCGATGAGAATGACTGTGTCACTCTG 1693
|| || |||||||||||| ||||||||||||| || |||||||||||||| ||||||||
Sbjct 1847 CGCGGTTCTTGGTGCAGCTTCACTCATGGCTGGTTCAATGAGAATGACTGTTTCACTCTG 1906
Query 1694 TGTTATATTCCTCGAACTCACCAACAACCTTCTTTTGCTT-CCCATTACAATGATTGTGC 1752
||||||||| || |||||||||||||||||||||||| || |||||||||||| ||||||
Sbjct 1907 TGTTATATTTCTGGAACTCACCAACAACCTTCTTTTG-TTGCCCATTACAATGTTTGTGC 1965
Query 1753 TTCTGATTGCCAAAACTGTGGGAGACAGCTTCAACCCAAGTATCTATGACATCAT-CTTG 1811
||||||| || ||||| || || ||||||||||| | ||||||||| || ||||| ||
Sbjct 1966 TTCTGATAGCTAAAACAGTAGGTGACAGCTTCAATCTAAGTATCTACGAGATCATTCTC- 2024
Query 1812 CATCTAAAGGGCTTACCTTTCTTAGAAGCAAATCCAGAGCCGTGGATGAGGAACCTCAGT 1871
||||| ||||||||||||||||| ||||||||||||||||||||||||||||| |||| |
Sbjct 2025 CATCTTAAGGGCTTACCTTTCTTGGAAGCAAATCCAGAGCCGTGGATGAGGAATCTCACT 2084
Query 1872 GTTGGTGAGCTTGGTGATGCTAAGCCCCCGGTTGTAACCCTGCAA-GGCGTAGAAAAGGT 1930
|| ||||||||| || |||||||| ||||||||||| || || || |||||||| ||
Sbjct 2085 GTAGGTGAGCTTAACGACGCTAAGCCTCCGGTTGTAACACTT-AACGGAGTAGAAAAAGT 2143
Query 1931 TTCAAAAATAGTTGATGTGCTAAAGAACACGACCCATAATGCATTCCCTGTTTTAGATAA 1990
|||| ||||| ||||| |||| |||||| || ||||| |||||||| || || |||
Sbjct 2144 GGCAAATATAGTCGATGTACTAAGGAACACAACGCATAACGCATTCCCAGTCTTGGATGG 2203
Query 1991 AGCAGAAGTACCTCAAGTGGGTCTACCAACTGGTGCTACAGAACTCCACGGGT-TGATCC 2049
|||||| | | || || | |||| | ||||| ||||| || | ||||||
Sbjct 2204 AGCAGA--T-CA--AA--------AC-A-CTGG--C-ACAGAGCTCCATGG-TCTGATCC 2244
Query 2050 TGAGAGCGCACCTCGTTAAAGTTCTGAAAAAGAGATGGTTCTTGACA-GAGAAAAGAAGA 2108
| ||||| ||||| || |||||||||||||||||||||||||||| | |||||||| |||
Sbjct 2245 TAAGAGCTCACCTTGTGAAAGTTCTGAAAAAGAGATGGTTCTTGA-ATGAGAAAAGGAGA 2303
Query 2109 ACAGAAGAGTGGGAGGTCAGGGAGAAGTTTC-CATGGGATGAATTGGCTGAGAGAGAAGA 2167
|||||||||||||| || ||||| ||||| | || || |||||| ||||||||||||||
Sbjct 2304 ACAGAAGAGTGGGAAGTTAGGGAAAAGTT-CACACCGGTTGAATTAGCTGAGAGAGAAGA 2362
Query 2168 CAACTTTGACGACGTGGCCATCACAAGCGCTGAAATGGAAATGTATGTCGATCTTCATCC 2227
||||| || || || || ||||||||| | || ||| || ||||||| |||||||||||
Sbjct 2363 TAACTTCGATGATGTTGCAATCACAAGCTCAGAGATGCAATTGTATGTTGATCTTCATCC 2422
Query 2228 TCTT-ACCAACACAACACCTTACACAGTCATGGAGAAC-ATGTCTGTGGCCAAGGCTTTA 2285
| || |||||||| |||||||||||||| || | || ||||| ||||| || |||||
Sbjct 2423 T-TTGACCAACACTACACCTTACACAGTGGTGCA-AAGTATGTCAGTGGCTAAAGCTTTG 2480
Query 2286 GTACTATTCCGG-CAAGTGGGACTCCGGCATTTGCTTATTGTTCCCAAGATTCAAGCCTC 2344
|| || |||||| || ||||| ||| | ||||| || | ||||||||||||||||| ||
Sbjct 2481 GTTCTGTTCCGGTCA-GTGGGTCTCAGACATTTACTGGTGGTTCCCAAGATTCAAGCTTC 2539
Query 2345 -GGGAATGTGTCCTGTGGTAGGGATCTTAACCAGGCAGGATCTAAGGGCATACAACATTC 2403
|||| ||| |||||| ||||||||||||| ||||| ||||| ||||| || |||||||
Sbjct 2540 AGGGA-TGTCACCTGTGATAGGGATCTTAACAAGGCAAGATCTCAGGGCTTATAACATTC 2598
Query 2404 TACAAGCCTTTCCTCTA-TTGGAAAAATC-CAAAAGTGGAAAAGC 2446
||||||| ||||||| | ||||| ||| | |||||||||||||||
Sbjct 2599 TACAAGCATTTCCTC-ACTTGGATAAA-CACAAAAGTGGAAAAGC 2641
> AT3G27180.1 | Symbols: | S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein | chr3:10026837-10030069
REVERSE LENGTH=1890
Length=1890
Score = 505 bits (273), Expect = 1e-141
Identities = 327/351 (93%), Gaps = 11/351 (3%)
Strand=Plus/Minus
Query 2369 CTTAACCAGGCAGGATCTAAGGGCATACAACATTCTACAAGCCTTTCCTCTATTGGAAAA 2428
||||||||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1890 CTTAACCAGACAGGACCTAAGGGCATACAACATTCTACAAGCCTTTCCTCTCTTGGAAAA 1831
Query 2429 ATCCAAAAGTGGAAAAG-CACATTG-AAGAGCTACTTACTTTGTTGTAA-AATATCGCTT 2485
||||||| |||| |||| ||||||| ||||||||||| | ||||||||| || |||||||
Sbjct 1830 ATCCAAAGGTGG-AAAGACACATTGAAAGAGCTACTTGC-TTGTTGTAAGAA-ATCGCTT 1774
Query 2486 GCAGCCTTGTGTTTTTCTTCTCATTCTTGAAGATGTATCTGTCCAGTTTTGCACTTCTTC 2545
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||
Sbjct 1773 GCAGCCTTGTGTTTTTCTTCTCATTCTTAAAGATGTATCTGTCCAGTTTTGCACTTTTTC 1714
Query 2546 TTCATATCCAACAGAAGTTGATAAGATAAATATTGCAATGACACAAAAAAGAGAGAAC-C 2604
||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | |
Sbjct 1713 TTCATATCCAACAGAAGTTGATAAGATAAATATTGCAATGACACAAAAA-GAGAGA-CTC 1656
Query 2605 ATATCGCGTTATCAACAGGAACAGAGCAAAACTGTTTTCTCATCTATTAGATGGTCTCCT 2664
||||| | ||||||||||||||||||||||||||||| | ||||||||||||||||||||
Sbjct 1655 ATATCTCCTTATCAACAGGAACAGAGCAAAACTGTTT-C-CATCTATTAGATGGTCTCCT 1598
Query 2665 AAACTTCTGAAGTTCAAGTGTTACAGACATTAACTAATGAGATTCTTGTGA 2715
|||| ||||||||||||||||||||||||||||||||| ||| || |||||
Sbjct 1597 AAACCTCTGAAGTTCAAGTGTTACAGACATTAACTAATAAGAGTCCTGTGA 1547
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 134848742784
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5