BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg484691 Length=1194 Score E Sequences producing significant alignments: (Bits) Value AT3G29240.1 | Symbols: | Protein of unknown function (DUF179) ... 1866 0.0 > AT3G29240.1 | Symbols: | Protein of unknown function (DUF179) | chr3:11191491-11192986 FORWARD LENGTH=1233 Length=1233 Score = 1866 bits (1010), Expect = 0.0 Identities = 1119/1172 (95%), Gaps = 6/1172 (1%) Strand=Plus/Plus Query 1 ACTAGGCCTACACATCATCaaaaaaaaGGTGATAAAAGATTTGTCTCTTATCCAGAATCC 60 |||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 1 ACTAGGGTTACACATCATCAAAAAAAAGGTGATAAAAGATTTGTCTCTTATCCAAAATCC 60 Query 61 AAACGCATATGGAAATGTTTATCTTTAAATACATCAACGCCTTAAAGGCTA-AGAACTAA 119 ||| |||||||||||||||||||||||||||||||||| ||||||||| || ||||||| Sbjct 61 AAAGGCATATGGAAATGTTTATCTTTAAATACATCAACACCTTAAAGGTTACGGAACTAA 120 Query 120 AGTGAATTTGAGTCAGAGAAAAAGAGAAAGAGAGAAGGTAACATGGATGCTTGTTTTCTT 179 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 AGTGAA-TTGAGTCAGAGAAAAAGAGAAAGAGAGAAGGTAACATGGATGCTTGTTTTCTT 179 Query 180 ACATCAAGATCAATCTCTGGTGTCAAAGAGCTTGTCCCGTTTATGAAAGCAAGAATCTTT 239 || |||||||||||||||||||| ||||||||||||||||| || ||||| ||||||||| Sbjct 180 ACCTCAAGATCAATCTCTGGTGTTAAAGAGCTTGTCCCGTTCATCAAAGCGAGAATCTTT 239 Query 240 ACTTGCCCCAAGAGAAATTCTGGCCAATTTATCACCAGGAAGGTTGCTTCTCCGATCTCT 299 |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| Sbjct 240 ACTTGCCCCAAGAGAAATTCTGGCCAATTTGTTACCAGGAAGGTTGCTTCTCCGATCTCT 299 Query 300 GTAAATTGTTCTCTTTCGGATTCATGGAAGCCACTGGATGATGATTCTGATCTTTTCAAG 359 |||||||||||||||||||||||||||||||||||||| |||||| ||||||| |||||| Sbjct 300 GTAAATTGTTCTCTTTCGGATTCATGGAAGCCACTGGAAGATGATGCTGATCTCTTCAAG 359 Query 360 GATTGTGTCAACAATTCTACAGAAGATGCTGATTGGAGGGAATTCAGGGCAAGGCTTGTT 419 ||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||| Sbjct 360 GATTGTGTCAACAATTCTACATCAGATGCTGATTGGAGGGAGTTCAGGGCAAGGCTTGTT 419 Query 420 GTAGGGGAACAAGCTGCAACGTCCGAGAAGGATCAGCCCTCTTGGTCTAACCCGGACATG 479 | ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 420 GCAGGGGAACAAGCTGCAACGTCCGAGAAGGATCAGCCCTCGTGGTCTAACCCGGACATG 479 Query 480 GTGGTGGACTATCAGCCATCATCTTCCTCACTGATCACAATTGGAAGCAGATGGGCACAC 539 ||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||| Sbjct 480 GTGGTGGACTATCAGCCATCATCGTCCTCACTGATCACAATTGGAAGCAAATGGGCACAC 539 Query 540 AAGATCCATGAGCCTGAAACAGGCTGCCTTCTAATCGCCACAGAGAAGCTAGATGGTGTC 599 |||||||||||||| || ||||||||||| ||||||||||||||||||||||| |||||| Sbjct 540 AAGATCCATGAGCCAGAGACAGGCTGCCTCCTAATCGCCACAGAGAAGCTAGACGGTGTC 599 Query 600 CACATCTTCGAAAAGACGGTGATCCTTCTCCTCTCTGTTGGACCCTCAGGTCCTATAGGA 659 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 600 CACATCTTCGAAAAGACGGTGATCCTCCTCCTCTCTGTTGGACCCTCAGGTCCTATAGGA 659 Query 660 GTCATCTTAAACCGTCCATCGCTGATGTCGATTAAGGAGACCAAGTCAACGATATTAGAC 719 |||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||| Sbjct 660 GTCATCCTAAACCGTCCATCTCTGATGTCTATTAAGGAGACCAAGTCAACGATATTAGAC 719 Query 720 ATGGCAGGAACGTTTTCAGACAAAAGACTCTTCTTTGGTGGACCTTTGGAAGAAGGGTTG 779 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 720 ATGGCAGGAACGTTTTCAGACAAAAGACTCTTCTTTGGTGGACCTTTGGAAGAAGGGTTG 779 Query 780 TTCTTGGTGAGTCCAAG-ATGTGGTGGAGGCAACGAAGTTGGTAAGAGCGGAGTGTTCAG 838 ||||||||||||||||| | ||||||||| |||||| ||||||||||||||||| ||||| Sbjct 780 TTCTTGGTGAGTCCAAGGA-GTGGTGGAGACAACGAGGTTGGTAAGAGCGGAGTATTCAG 838 Query 839 ACAAGTAATGAAAGGATTGTACTATGGAACAAGAGAGAGTGTAGGATTGGCTGCAGAAAT 898 |||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct 839 ACAAGTGATGAAAGGATTGTACTATGGAACGAGAGAGAGTGTAGGATTGGCTGCAGAGAT 898 Query 899 GGTGAAGAGGAATTTGGTTGGAAGAAGTGAGTTTAGATTCTTTGATGGGTATTGTGGTTG 958 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 899 GGTGAAGAGGAATTTGGTTGGAAGAAGTGAGCTTAGATTCTTTGATGGGTATTGTGGTTG 958 Query 959 GGAAAAAGAGCAGCTAAAAGCAGAGATCTTGGGAGGTTATTGGACAGTTGCTGCTTGTAG 1018 ||||||||||||| |||||||||||||||||||||| |||||||| |||||||||||||| Sbjct 959 GGAAAAAGAGCAGTTAAAAGCAGAGATCTTGGGAGGGTATTGGACTGTTGCTGCTTGTAG 1018 Query 1019 CTCCACTGTTGTTGAGCTTGGTTCAGCTGTCCAAAGTCATGGTCTTTGGGATGAGGTTCT 1078 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1019 CTCCACTGTTGTTGAGCTTGGTTCAGCTGTCCAAAGTCATGGTCTTTGGGATGAGGTTCT 1078 Query 1079 TGGGCTTATTGGGCCTCAAACTGGCTCTGTTATCTAAAATCTTGTTTTTGTAATGCTTTT 1138 ||||||||||||||||||||| |||||||||||||||| |||||||||||| ||| ||| Sbjct 1079 TGGGCTTATTGGGCCTCAAACGGGCTCTGTTATCTAAAC-CTTGTTTTTGTACTGCATTT 1137 Query 1139 CACTAATGGTTTATGGTATAACTAT-TGTATG 1169 ||||||||||||||||||| ||||| |||||| Sbjct 1138 CACTAATGGTTTATGGTATGACTATGTGTATG 1169 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 58634236560 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5