BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg484728 Length=2368 Score E Sequences producing significant alignments: (Bits) Value AT3G30300.1 | Symbols: | O-fucosyltransferase family protein |... 3661 0.0 > AT3G30300.1 | Symbols: | O-fucosyltransferase family protein | chr3:11921198-11924574 REVERSE LENGTH=2486 Length=2486 Score = 3661 bits (1982), Expect = 0.0 Identities = 2255/2386 (95%), Gaps = 21/2386 (1%) Strand=Plus/Plus Query 1 CACCGATCTACTTCACCAGACATGTTCTCACACGTG--tc-tc-ctctctctctctctTC 56 |||||||||||||| ||||||||||||||||||||| || || |||||||||||||||| Sbjct 101 CACCGATCTACTTCTCCAGACATGTTCTCACACGTGTCTCTTCTCTCTCTCTCTCTCTTC 160 Query 57 CGATTCAACTTTTCTTCTA--CTCACTCTAGTCTCTGTTATGTCCTCCATTAGTAAAAGA 114 ||||||||||||||||||| |||||| ||||||||||||||||||||||||| |||||| Sbjct 161 CGATTCAACTTTTCTTCTACTCTCACTTTAGTCTCTGTTATGTCCTCCATTAGCAAAAGA 220 Query 115 ACCAATTCACTTCAGTTCACTTTCACATC-T---GTAGAGATGAAGGGAGAAGGTAAAGT 170 |||| ||||||||| |||||||||||||| | |||||||||||||||||||||||||| Sbjct 221 ACCACTTCACTTCACTTCACTTTCACATCTTGAAGTAGAGATGAAGGGAGAAGGTAAAGT 280 Query 171 CTTCTTGAAGTCGCGTATGAAATGGATTGgtcttcttggtctct-ttctgtctgctttct 229 |||||||||||||||||||||||||||||||||||||||||| | |||| |||||||||| Sbjct 281 CTTCTTGAAGTCGCGTATGAAATGGATTGGTCTTCTTGGTCT-TGTTCTCTCTGCTTTCT 339 Query 230 ctcttcttgtccattttcttctcGCCGGATTCACAGATGACTCAATCTCCGATTACTCTA 289 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 340 CTCTTCTTGTCCATTTTCTTCTCGCTGGATTCACAGATGACTCAATCTCCGATTACTCTA 399 Query 290 TTCCTGTTACTATCTTCTCTTGGAGACC-AGTCTTCGACAATCCCAGATTTGCCCGACAT 348 | ||||| |||||||||||||||||||| | ||||||||||||||||||||||||| ||| Sbjct 400 TCCCTGTCACTATCTTCTCTTGGAGACCTA-TCTTCGACAATCCCAGATTTGCCCGTCAT 458 Query 349 ACACCATTGTATCGAAGACTTTGGGGACCAACAAGACATGTGGAGACATTACTTCCTGAT 408 |||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 459 ACACCATTGTATAGAAGACTTTGGGGACCAACAAGACATGTAGAGACATTACTTCCTGAT 518 Query 409 GCTAATCCTAGAGGTTTCCATTCAGATCCTCCGGCAAGGACAAACGGTTTTGTTTTTGTT 468 ||||||||||||||||| |||||||||||||| ||||||||||| ||||||||||||||| Sbjct 519 GCTAATCCTAGAGGTTTTCATTCAGATCCTCCTGCAAGGACAAATGGTTTTGTTTTTGTT 578 Query 469 AGAATACAAGGTGGTTTCCATGAGATTAGAAATTCGATTCCTGATGTTGTAGCAGTTTCT 528 |||||||||||||||||||||||||||||||| |||||||||||||||||||| || ||| Sbjct 579 AGAATACAAGGTGGTTTCCATGAGATTAGAAACTCGATTCCTGATGTTGTAGCTGTGTCT 638 Query 529 CGGCTTCTTAACGCCACTTTGGTGATTCCTGAGATTCAATCAACAACTAGCAGCAAAGGG 588 ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| Sbjct 639 CGGCTTCTTAACGCCACTTTGGTGATTCCTGAGATACAATCAACAACTAGTAGCAAAGGG 698 Query 589 ATTAGTTCACAGTTCAAGAGCTTTGCGTATTTGTACAACGAAGAACACTTCATGTCTTCA 648 |||||||||||||||||||||||||||||||||||||| ||||||||||||||| || || Sbjct 699 ATTAGTTCACAGTTCAAGAGCTTTGCGTATTTGTACAATGAAGAACACTTCATGGCTACA 758 Query 649 ATTGCAAATGATGTTAGAGTTGTTAAAACTCTTCCCAAGAATCTCAAATGGGCTAGAAGA 708 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 759 ATTGCAAATGATGTTAGAGTTGTTAAAACTCTTCCCAAGAATCTCAAATGGGCTAGAAGA 818 Query 709 AAGAAACAAATTCCTTCTTTTAAAGTCTCTTACGGATCTTCGCCTTATTACTACTTGCAT 768 |||||||| |||||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct 819 AAGAAACAGATTCCTTCTTTTAAAGTCTCTTACGGATCTTCACCTTATTACTACTTACAT 878 Query 769 CATGTTCTACCTGTTCTCATTAAGCACTCGGTTGTTGAACTCGTTGTCCCTCACGGTGGA 828 ||||||||||||||||| ||||| |||||||| |||||||| |||||||| ||||||||| Sbjct 879 CATGTTCTACCTGTTCTTATTAAACACTCGGTCGTTGAACTAGTTGTCCCGCACGGTGGA 938 Query 829 TGCTTACAAGCTATACTTCCAAGTGATCTTGAAGAATATCAGAGATTACGGTGTAGAGTT 888 |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| Sbjct 939 TGCTTACAAGCTATACTTCCTAGTGATCTTGAAGAATATCAGAGGTTACGGTGTAGAGTT 998 Query 889 GCGTTT-CACGCCTTACAATTTAGGAAAGAGGTTCAAGAACTTTCCACTAAAGTATTGCA 947 || ||| |||| |||||||||||||||||||||||||||||||||||||||||||| || Sbjct 999 GC-TTTCCACGGTTTACAATTTAGGAAAGAGGTTCAAGAACTTTCCACTAAAGTATTACA 1057 Query 948 AAGGCTGAGACCTTTAGGACGACCTTTCATAGCCTATGATCCAGGGATGACAAGAGAAGC 1007 |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 1058 AAGGCTGAGACCGTTAGGACGACCTTTCATAGCTTATGATCCAGGGATGACAAGAGAAGC 1117 Query 1008 TTTGGCCTACCATGGTTGTGCTGAACTGTTCCAGGATGTTCATACCGAGCTGATTCAACA 1067 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1118 TTTGGCCTATCATGGTTGTGCTGAACTGTTCCAGGATGTTCATACCGAGCTGATTCAACA 1177 Query 1068 TAAACGAGCTTGGATGATAAAACGTGGGATTGTCAAAGGGAAGCTCTCTGTAGACTCAAC 1127 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | Sbjct 1178 TAAACGAGCTTGGATGATAAAACGTGGTATTGTCAAAGGGAAGCTCTCTGTAGACTCAGC 1237 Query 1128 CGAGCAACGCCTTGCGGGCTTATGTCCTCTAATGCCAGAAGAAGTTGGTATTCTTCTAAG 1187 |||||||||||| ||||| ||||||||||| |||||||||||||||||||||||| || | Sbjct 1238 CGAGCAACGCCTCGCGGGGTTATGTCCTCTTATGCCAGAAGAAGTTGGTATTCTTTTACG 1297 Query 1188 AGCTTATGGATACGCATGGGACACAATCATATATGTCGCTGGAGGAGAGGTTTTTGGCGG 1247 ||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||| || Sbjct 1298 AGCTTATGGATACTCATGGGATACAATCATATATGTCGCTGGGGGAGAGGTTTTTGGTGG 1357 Query 1248 GCAGAGAACGTTAATTCCTTTACATGGCATGTTTGAGAATGTCGTTGACCGTACTTCTCT 1307 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 1358 GCAGAGAACGTTAATTCCTTTACATGGTATGTTTGAGAATGTCGTTGACCGTACTTCTCT 1417 Query 1308 TAGTACTAGCTGGGAGCTTGCTAAGATGTATGGGCGTGAGGCAAAACATAATGATATCAA 1367 ||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| Sbjct 1418 AAGTACTAGCTGGGAGCTTGCTAAAATGTATGGGCGTGAGGCAAAGCATAATGATATCAA 1477 Query 1368 GAAAATGACACCTCCTTCGATTGAGGAAGAAACGAAACATGATTCATTGAAAAGCACAAG 1427 ||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| Sbjct 1478 GAAAATGACACCTCCTTCGATCGAGGTAGAAACGAAACATGATTCATTGAAAAGCACAAG 1537 Query 1428 ACAAAGGCCTCAACCACTTCCGCCTCCACCGGCTAGACCAAAGTACTACAACATTGAAGG 1487 |||||| |||||||| ||||| |||||||| ||||||||||||||||||||||| ||||| Sbjct 1538 ACAAAGACCTCAACCGCTTCCACCTCCACCAGCTAGACCAAAGTACTACAACATCGAAGG 1597 Query 1488 TTGGTGGGGTTGGGTAGCTGAGAGTGACAATGAGCCCGAAAGCACGGTTATTGAGCTGAG 1547 |||||||||||||||||| ||||||||||| |||||||||||||||||||||||| |||| Sbjct 1598 TTGGTGGGGTTGGGTAGCCGAGAGTGACAACGAGCCCGAAAGCACGGTTATTGAGTTGAG 1657 Query 1548 AACTAATGCTCACAAGCTGTTGTGGGAAGCAATTGATTATGTTGTTAGCGTGGAAGCAGA 1607 ||||||||| || ||| ||||||||||||| || ||||| |||||||||||||||||||| Sbjct 1658 AACTAATGCCCATAAGTTGTTGTGGGAAGCGATAGATTACGTTGTTAGCGTGGAAGCAGA 1717 Query 1608 TGTATTTATCTCGGGATTTGATCACGATGGGAAAGGACATCCGAGTTTTGCTAGTTTGGT 1667 ||| ||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||| Sbjct 1718 TGTGTTTATCTCGGGTTTTGATCGCGATGGGAAAGGACATCCGAGTTTCGCTAGTTTGGT 1777 Query 1668 GATGGGTCACCGGCTTTATCAGTCTGCTTCTGCTAAGACATTTAGACCAGACAGGAAACA 1727 ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 1778 CATGGGACACCGGCTTTATCAGTCTGCTTCTGCTAAAACATTTAGACCAGACAGGAAACA 1837 Query 1728 AATTGCAATGCTTTTGGAAGAGATCCGAGACCATATGTACGAGGCGAATCACACTTGGAT 1787 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 1838 AATTGCAATGCTTTTGGAAGAGATTCGAGACCATATGTACGAGGCGAATCACACTTGGAT 1897 Query 1788 AACATCAGTTAGGAAGCTACTCAAGAGAAGCATACTCGAGGGTCTAATCGAATCTTCTAA 1847 ||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| || Sbjct 1898 AACATCAGTTAGGAAGCTACTAAAGAGAAGCATACTCGAGGGTCTAATGGAATCTTCCAA 1957 Query 1848 AAAATCAAAAGCCTTTAGTTTTCTTTCGCATCCTGTACCCGAATGTTCTTGCATAACGCG 1907 || ||||||||| |||||||||||||| |||||||||||||||||||||||||| ||||| Sbjct 1958 AAGATCAAAAGCATTTAGTTTTCTTTCCCATCCTGTACCCGAATGTTCTTGCATTACGCG 2017 Query 1908 GGCCCATCCGGTTTCAAACGCCTCAAATCTTGGAGTGACACACCGTTGTCCGCAATGGAT 1967 |||||||||||||||| ||| |||||||||| |||||||||||||||||||||||| | Sbjct 2018 AACCCATCCGGTTTCAAATGCCACAAATCTTGGGGTGACACACCGTTGTCCGCAATGGGT 2077 Query 1968 GGATGGCATTGTAAACAAAAGATCAAAGGATTATAAGAACGCAGAGAAAGAAGAGGATCT 2027 |||||| ||||| | |||||| |||||| ||||||||||||||||||||||||||||| Sbjct 2078 GGATGGTGCTGTAAGCGAAAGATTAAAGGAGTATAAGAACGCAGAGAAAGAAGAGGATCT 2137 Query 2028 TGATGAAGAGGACTTGTCTTCTTCAGGATTGTTCTTTGGTCACAAGGAAAGTGGAGGGAA 2087 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2138 TGATGAAGAGGACTTGTCTTCTTCAGGATTGTTCTTTGGTCACAAGGAAAGTGGAGGGAA 2197 Query 2088 CAATAATGGTAACAATGAGACTGTAAATTCTGAAGCTAACAACAAGGAAGAAGGCCAGCT 2147 ||||||||||||||||||||||||||||| ||||||||||| ||||||||||| ||||| Sbjct 2198 TAATAATGGTAACAATGAGACTGTAAATTCCGAAGCTAACAATAAGGAAGAAGGTCAGCT 2257 Query 2148 TGAAGATCAAGAAGAGCTTGAAGGTGGCGAAAGATAAGGCTTGTGATTGAAGATGCAACA 2207 ||||||||||||||| |||||||| ||||||||||||||||||| |||||||||||||| Sbjct 2258 TGAAGATCAAGAAGAACTTGAAGGCAGCGAAAGATAAGGCTTGTGGTTGAAGATGCAACA 2317 Query 2208 ATGAGTAAGTCGCAGGTAGATCTAACCTTTTCTCAAAAATAGTTTATAGCCTGGTTATTA 2267 ||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 2318 ATGAGCAAGTCGCAGATAGATCTAACCTTTTCTCAAAAATAGTTTATAGCCTGGTTATTA 2377 Query 2268 CTTATTAGGTTGTGTATTAGAATC-Gt-ttttttttttt-A--ATCAACTTTACAACAGT 2322 ||||||||||||||||||||||| || ||||||||||| | ||||| ||||||||||| Sbjct 2378 CTTATTAGGTTGTGTATTAGAATATGTCTTTTTTTTTTTGATGATCAATTTTACAACAGT 2437 Query 2323 TTAGTGATTTTTAAGAACATAATTCTATGGTACTATATATTTTTGT 2368 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2438 TTAGTGATTTTTAAGAACATAATTCTATGGTACTATATATTTTTGT 2483 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 117569676390 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5