BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg484947 Length=3408 Score E Sequences producing significant alignments: (Bits) Value AT3G45630.1 | Symbols: | RNA binding (RRM/RBD/RNP motifs) fami... 4927 0.0 AT5G60170.2 | Symbols: | RNA binding (RRM/RBD/RNP motifs) fami... 1129 0.0 > AT3G45630.1 | Symbols: | RNA binding (RRM/RBD/RNP motifs) family protein | chr3:16748174-16753833 REVERSE LENGTH=3555 Length=3555 Score = 4927 bits (2668), Expect = 0.0 Identities = 3196/3445 (93%), Gaps = 59/3445 (2%) Strand=Plus/Plus Query 1 TTGtctcttgcaatctcccacttctctcaatcttcttcttcttcttccacaatctcCGAT 60 |||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| Sbjct 15 TTGTCTCTTGCAATCTCCCACTTCTCTCAA---TCTTCTTCATCTTCCACAATCTCCGAT 71 Query 61 CGAATCTCCT-TACTCAGCCGaaaaaaaTGAGTGATTACGGTGAAAAGACTTGCCCTTTG 119 ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 72 CGAATCT-CTCTACTCAGCCGAAAAAAATGAGTGATTACGGTGAAAAGACTTGCCCTTTG 130 Query 120 TGTGCAGAGGAGATGGATTTGACTGACCAGCAATTGAAGCCTTGCAAATGTGGCTATCAG 179 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 131 TGTGCTGAGGAGATGGATTTGACTGACCAGCAATTGAAGCCTTGCAAATGTGGCTATCAG 190 Query 180 ATTTGTGTTTGGTGCTGGCACCACATAATGGACATGGCAGAGAAAGATCAATCAGAAGGG 239 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 191 ATTTGTGTTTGGTGCTGGCACCATATAATGGACATGGCAGAGAAAGATCAATCAGAAGGG 250 Query 240 CGCTGTCCAGCTTGCCGTACTCCATATGATAAAGAAAAGATTGTTGGGATGACCGTTGAT 299 ||||||||||||||||| ||||||||||| ||||||||||||||||||||||| |||||| Sbjct 251 CGCTGTCCAGCTTGCCGCACTCCATATGACAAAGAAAAGATTGTTGGGATGACTGTTGAT 310 Query 300 CAAGAGAGACTGACCTCTGAAGGCAACATGGATCGCaaaaaaaCACAAAAGTCAAAATTG 359 || ||||||||| |||||||||||||||||||||||||||||| ||||||||| ||| | Sbjct 311 CAGGAGAGACTGGCCTCTGAAGGCAACATGGATCGCAAAAAAATACAAAAGTCGAAACCG 370 Query 360 AAATCTTCTGAAGGGAGAAAGCCACTAACAAGTGTCCGAGTGGTTCGAAGAAATCTTGTT 419 ||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 371 AAATCTTCTGATGGGAGAAAGCCACTAACAAGTGTCCGAGTGGTTCAAAGAAATCTTGTT 430 Query 420 TACATTGTTGGGTTGCCCCTTAATCTAGCAGATGAAGATCTTCCCCAGCGTAATGAGTAT 479 ||||||||||| ||||||||||||||||||||||||||||||| ||||||||| || ||| Sbjct 431 TACATTGTTGGATTGCCCCTTAATCTAGCAGATGAAGATCTTCTCCAGCGTAAAGAATAT 490 Query 480 TTTGGTCAGTATGGAAAGGTTCTAAAGGTTTCCATGTCCCGAACAGCAACAGGTCTCATC 539 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 491 TTTGGTCAGTATGGAAAGGTTCTAAAGGTTTCGATGTCCCGAACAGCAACAGGTCTCATC 550 Query 540 CAACAGTTCCCTAACAACACATGCAGTGTATATATCACTTATGGCAAAGAGGAAGAGGCT 599 |||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||| Sbjct 551 CAACAGTTTCCTAACAACACATGCAGTGTATACATCACATATGGCAAAGAGGAAGAGGCC 610 Query 600 GTTCGATGTATTCAATCTGTCCATGGGTTTATCTTGGATGGTAAAGCACTGAAGGCATGT 659 ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 611 ATTCGATGTATTCAGTCTGTTCATGGGTTTATCTTGGATGGTAAAGCACTGAAGGCATGT 670 Query 660 TTTGGGACAACAAAGTATTGTCATGCATGGTTAAGAAACGCGACATGCAACAATCCTGAT 719 ||||||||||| |||||||| ||||||||||| ||||||| | |||||||||||| ||| Sbjct 671 TTTGGGACAACCAAGTATTGCCATGCATGGTTGAGAAACGTGGCATGCAACAATCAGGAT 730 Query 720 TGCCTCTATTTGCATGAGGTTGGCTCTCAAGAGGATAGTTTTACAAAAGATGAGATCATA 779 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 731 TGCCTCTATTTGCATGAGGTTGGCTCTCAAGAGGATAGTTTTACAAAAGATGAGATCATA 790 Query 780 TCAGCCTATACAAGGGTTCAGCAAATCACTGGAGCAACAAATACTATGCAATACCGTTCA 839 |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 791 TCAGCCCATACAAGAGTTCAGCAAATCACTGGAGCAACAAATACTATGCAATACCGTTCA 850 Query 840 GGGAGCATGCTACCTCCACCATTGGATGCTTATGGCAGTGACAGTTCTACTGCG-AATCC 898 ||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||||| Sbjct 851 GGGAGCATGCTACCTCCACCATTGGATGCTTATACCAGTGACAGTTCTACTG-GAAATCC 909 Query 899 AATTGCAAAAGTTCCTTCTACTACTTCAGTTAGTGCTCCTAGGAGTTCTCCACCTAGTGG 958 |||||||||||||||||||| |||||||||||||||||||| |||||| ||||||||||| Sbjct 910 AATTGCAAAAGTTCCTTCTAGTACTTCAGTTAGTGCTCCTAAGAGTTCCCCACCTAGTGG 969 Query 959 GAGCTCTGGTAAATCAACTGCGCTTCCTGCTGCAGCATCATGGGGGGCACGTTTAACAAA 1018 |||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 970 GAGCTCGGGTAAATCAACTGCTCTTCCTGCTGCAGCATCATGGGGGGCACGTTTAACAAA 1029 Query 1019 TCAACACTCTTTAGCAACTTCAGCTTTGTCAAATGGATCTTTGGATAATCAAAGATCAAC 1078 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1030 TCAACACTCTTTAGCAACTTCAGCTTTGTCAAATGGATCTTTGGATAATCAAAGATCAAC 1089 Query 1079 ATCAGAGAATGGAACTTTGGCTATGTCTACAGTTGTTGCAAATGCAGCTCATGGGCCTGT 1138 ||||||||||||||||||||||| ||||||||||||| |||| |||||| |||||||||| Sbjct 1090 ATCAGAGAATGGAACTTTGGCTACGTCTACAGTTGTTACAAAGGCAGCTAATGGGCCTGT 1149 Query 1139 AACCTCTAGTAACACTCTTCAGAAACCACCTCTTAAGGAAGAAATTCAAACATTGGCTGA 1198 | |||||||||||| |||||||||| ||||||| ||||||||||||||| |||||||||| Sbjct 1150 ATCCTCTAGTAACAGTCTTCAGAAAGCACCTCTCAAGGAAGAAATTCAATCATTGGCTGA 1209 Query 1199 AAAAAGCAATCCTAGCGTGTTTAAGCCTTTGCAGCAGAAGATTGTGTTGGATTCTGGGTC 1258 ||||||||| ||| | ||||| |||||||||||||||||||||||||||||| | | ||| Sbjct 1210 AAAAAGCAAACCTGGTGTGTTGAAGCCTTTGCAGCAGAAGATTGTGTTGGATCCCGAGTC 1269 Query 1259 CAAGAGAACTACATCACCTAATAGAGATCCTAGTAGCAATCAGATATCCTGTTTAGAAGA 1318 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| Sbjct 1270 CAAGAGAACTACATCACCTAATAGAGACCCTAGTAGCAATCAGATATCCTGTTTAGTAGA 1329 Query 1319 ATCTTCCTACAATAGCAGAGTCATTGACAAGCCTTCTGCTGTTGAGAATTCTTTTGAACA 1378 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 1330 GTCTTCCTACAATAGCAGAGTCATTGACAAGCCTTCTGCTGTTGAGAATTCTCTTGAACA 1389 Query 1379 CACAAATGAAATTGCTGAAGATTTCCTCGATGTTAGTAACTTGTCGGCTGATGTTGCATG 1438 ||||| |||||||||||||||| || |||||||| |||| ||||| |||||||||||||| Sbjct 1390 CACAAGTGAAATTGCTGAAGATGTCTTCGATGTTGGTAAATTGTCTGCTGATGTTGCATG 1449 Query 1439 GATGGGGATAACTACAAATTCTAGGGATGAAGCTCCTGGTGTTCCAGTGGCTATTGGTAC 1498 ||||||||||||||||||||||||||||||| | |||||||||||||||| ||| ||||| Sbjct 1450 GATGGGGATAACTACAAATTCTAGGGATGAAACCCCTGGTGTTCCAGTGGTTATCGGTAC 1509 Query 1499 TCATTGTGATCAAGGTTCTATTAGACAACCTGATAACTATGTACAAAATCTTGAGCGATG 1558 ||||||||||| |||||||||| |||| |||||||| ||||||||||||| |||| ||| Sbjct 1510 TCATTGTGATCTTGGTTCTATTACACAATCTGATAACGATGTACAAAATCTCGAGCAATG 1569 Query 1559 TAGAAAAGATTCTCCTACAACCACTTATGCAGAAGCTGGCATATCACAGAATGGGATTCA 1618 ||||||| | |||||||||| ||||||||||||||||| |||||||| |||||| ||||| Sbjct 1570 TAGAAAACAGTCTCCTACAAACACTTATGCAGAAGCTGACATATCACTGAATGGAATTCA 1629 Query 1619 TGGTTCAAGGCCAGAGTGGGATTGGAGATCAGGTTCGCAATCCCAGATAGATGTCAAGGC 1678 |||||||||||| |||||||||||||||||||||| |||||||||||||||||| |||| Sbjct 1630 TGGTTCAAGGCCTGAGTGGGATTGGAGATCAGGTTTGCAATCCCAGATAGATGTTAAGGA 1689 Query 1679 ACAGGTGGATGTCAATGATTCCTCATCATTCAATAACAATA-AGCG-GGTTGTTGCAGAG 1736 || | |||| |||||||||| |||||||||||||||||| | | || ||| |||||||| Sbjct 1690 ACCGTTGGAAGTCAATGATTTCTCATCATTCAATAACAACAGA-CGTGGTA-TTGCAGAG 1747 Query 1737 GCTGTTAGCCACTCCACTTATATGTTTAGTTCATCAAGCTCAATTCTGGATTCAAATCAT 1796 |||||||||||||| |||| || |||||||||||||| |||||||||||||||||||||| Sbjct 1748 GCTGTTAGCCACTCGACTTCTAAGTTTAGTTCATCAATCTCAATTCTGGATTCAAATCAT 1807 Query 1797 CTAGCTTCTCGTTCTTTCCAGACCCGGGAAACTTCTGGTGGGATGGATTCAAATACTGGA 1856 |||||||||||||| ||||||| ||||||||||||| |||||||||||||||| |||||| Sbjct 1808 CTAGCTTCTCGTTCGTTCCAGAACCGGGAAACTTCTTGTGGGATGGATTCAAAAACTGGA 1867 Query 1857 TCCACCTTTGAAATAGGTAGCGATAGTTTGCATCTTCCAAATGGATTTTCTGAGAAAGCC 1916 ||| |||||||||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct 1868 TCCTCCTTTGAAATAGGTAGTGATAGATTGCATCTTCCAAATGGATTTTCTGAGAAAGCT 1927 Query 1917 ATATCCAATATGGAGCATTCATTATTTGCTAATGAAGGCAGGAGCAACATTCAGAATGCA 1976 || |||||||||||||||||||||||||||||||||||||| ||||||||||||||| || Sbjct 1928 ATGTCCAATATGGAGCATTCATTATTTGCTAATGAAGGCAGAAGCAACATTCAGAATACA 1987 Query 1977 GAGGATGATATAATTTCGAACATTTTAGACTTTGATCCCTGGGATGAATCCTTGACTTCG 2036 ||||||||||| ||||| |||||||||||||||||||||||||||||||| ||||||||| Sbjct 1988 GAGGATGATATCATTTCAAACATTTTAGACTTTGATCCCTGGGATGAATCGTTGACTTCG 2047 Query 2037 CCACACAATTTTGCAAAATTACTTGGCCAGAGTGATCATAGGGCTAGTACTCTGGAATCT 2096 | |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| Sbjct 2048 CAACACAATTTTGCAAAATTACTTGGTCAGAGTGATCATAGGGCCAGTACTCTGGAATCT 2107 Query 2097 TCTAACCTCCTAAAGCAACATAATGACCAGTCCAGATTCTCTTTTGCTCGGCATGAAGAA 2156 |||||||||||||||||||||||||||||||| || |||||||||||||||||||||||| Sbjct 2108 TCTAACCTCCTAAAGCAACATAATGACCAGTCTAGGTTCTCTTTTGCTCGGCATGAAGAA 2167 Query 2157 TCAAATAATCAAGCGTATGACAATAAAAGTTACAGCATATATGGGCAGTTGTCAAGAGAT 2216 ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 2168 TCAAATAGTCAAGCGTATGACAATAGAAGTTACAGCATATATGGGCAGTTGTCAAGAGAT 2227 Query 2217 CAGCCTCTTCAGGAGTTTGGAGTGAACCGTGATATGTATCAGGATAAGCTCGGCAGTCAA 2276 ||||||||||| |||||||||| ||||||||||||||||||||||||||| ||||||||| Sbjct 2228 CAGCCTCTTCAAGAGTTTGGAGCGAACCGTGATATGTATCAGGATAAGCTTGGCAGTCAA 2287 Query 2277 AATGGTTTTGCCTCAAATTATTCTGGCGGATATGAACAATTTGCTGCTAGTCCTGGATTA 2336 ||||||||||||||||| ||||| || |||||||||||||||||| |||||||||||||| Sbjct 2288 AATGGTTTTGCCTCAAACTATTCCGGTGGATATGAACAATTTGCTACTAGTCCTGGATTA 2347 Query 2337 TCTTCTTACAAGAGTCCTGTGGCGAGGACTCAAGTTTCTGCTCCTCCTGGATTTTCTGCT 2396 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 2348 TCTTCTTACAAGAGTCCTGTGGCGAGGACTCAAGTTTCTGCTCCTCCCGGATTTTCTGCT 2407 Query 2397 CCCAACAGGTTACCTCCTCCGGGTTTCTCTTCACATGAAAGAGCCGACCTGTCTTCTGAT 2456 |||||||||||||||||||| ||||||||||||||| |||||| |||||||||||||||| Sbjct 2408 CCCAACAGGTTACCTCCTCCCGGTTTCTCTTCACATCAAAGAGGCGACCTGTCTTCTGAT 2467 Query 2457 ATTGCATCAGGAACTCGTTTACTTGACTCAGCCAATTTGTTGAGGAACGCATATCATGTA 2516 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2468 ATTGCATCAGGAACTCGTTTACTTGACTCAGCCAATTTGTTGAGGAACGCATATCATGTA 2527 Query 2517 CCCCCTCCAAGTGGAAATTTGAATGCTGCAGGAGATATTGAGTTTATTGATCCTGCAATT 2576 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2528 CCACCTCCAAGTGGAAATTTGAATGCTGCAGGAGATATTGAGTTTATTGATCCTGCAATT 2587 Query 2577 TTAGCTGTTGGAAGGGGAAGACTTCACAATGGGATGGAAACAGCAGATTTTGATATGAGA 2636 |||||||||||||||||||||||||| |||||||||||||||||||| |||||| ||||| Sbjct 2588 TTAGCTGTTGGAAGGGGAAGACTTCATAATGGGATGGAAACAGCAGACTTTGATTTGAGA 2647 Query 2637 TCAGGGTTCTCTTCTCAGCTGAATTCATTTGAGAACGATGCAAGACTTCAATTGTTGGCG 2696 ||||||||||||||||| |||||||||||||| || ||||||||||| |||||||||||| Sbjct 2648 TCAGGGTTCTCTTCTCAACTGAATTCATTTGATAATGATGCAAGACTCCAATTGTTGGCG 2707 Query 2697 CAGAGGTCTCTGGCTGCACAGCAAGTTAATGGATTTCACGATCCCAGGAACGTTAACAAC 2756 |||||||||||||||||||| ||||| |||||||||||||||||||||||||| |||||| Sbjct 2708 CAGAGGTCTCTGGCTGCACAACAAGTCAATGGATTTCACGATCCCAGGAACGTAAACAAC 2767 Query 2757 TTTTCTTCTCCACTCTCTGACCCATATGGGATTATTAGTTCGAGGCTAATGGATCAAACA 2816 || |||||| | ||||||||||||||||||||| | ||||||| || |||||||||| Sbjct 2768 TTCTCTTCTTCGTTCTCTGACCCATATGGGATTA---GCTCGAGGCCAACGGATCAAACA 2824 Query 2817 CAAGGAGCTGGTTTATCTCCTTTCACACAGTTGCCTAGACAAGCTTCACCAAATCCATTG 2876 |||||| |||| || ||||||||||||||| ||||||||||||||||| ||||||||||| Sbjct 2825 CAAGGAACTGGCTTGTCTCCTTTCACACAGCTGCCTAGACAAGCTTCAGCAAATCCATTG 2884 Query 2877 TTGTCAAATGGACACTGGGATAA---GTGGAATGAACCCCAAAGTGGTAACAATCTTGGG 2933 ||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||| Sbjct 2885 TTGTCAAATGGACACTGGGATAATAAGTGGAATGAACCACAAAGTGGTAACAATCTTGGG 2944 Query 2934 ATTGCCCAGCTTCTAAGGAATGAACGGATGGGTTTTAATGACAACGCCTACAGCCGTTTT 2993 ||| |||||||||||||||||||||||||||||||||||||||||| |||||| ||||| Sbjct 2945 ATTACCCAGCTTCTAAGGAATGAACGGATGGGTTTTAATGACAACGTTTACAGCGGTTTT 3004 Query 2994 GAAGAGCCTAAATTCCGGAGGCCCAGTCCTGGAGATCCGTACAACAGAACATACGGGATA 3053 |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| Sbjct 3005 GAAGAGCCTAAATTCCGGAGGCCCGGTCCTGGAGATCCGTATAACAGAACATACGGGATT 3064 Query 3054 TGATTCTCAGAATTCTGATTTGGTTGGATTTTCTCTCAAGACCGTCTCAAAAGAAGGATT 3113 |||||||| ||||||| || |||||||||||| || ||||| ||||||||||||||||| Sbjct 3065 TGATTCTCGGAATTCTTCTT-GGTTGGATTTTCACTTAAGACTGTCTCAAAAGAAGGATT 3123 Query 3114 GTTGTTTGGCTGATTCCAGTGTTGGAAGAATCATAGTTGAAACTGCTCTGCCTATTAGCC 3173 || || |||||||||| ||||||| ||| ||||||| |||||||||||||||||| ||| Sbjct 3124 -TT-TT-GGCTGATTCCGGTGTTGGGAGATTCATAGTCGAAACTGCTCTGCCTATTTGCC 3180 Query 3174 CATATCATACCAGACCTTCGAATCAACAATCGCAA-TATTGGCTCCCCCAAAGCAGTTTT 3232 ||||||| |||||||||| || ||||||| ||||| ||| |||||| |||||||||||| Sbjct 3181 CATATCAAACCAGACCTTAGAGTCAACAACCGCAAATATCGGCTCCTCCAAAGCAGTTTA 3240 Query 3233 AACTCTCAATTGGAGGACAACCTTAC-CATGTTGGCTTTGTATCAGCAAAAATTTGATGC 3291 ||||| |||||||||| | |||||| | |||||||||||||||||||||| |||||||| Sbjct 3241 AACTC--AATTGGAGGATA-CCTTACTC-TGTTGGCTTTGTATCAGCAAAAGTTTGATGC 3296 Query 3292 TTCAG-----A------A----G--G-TAATTTTGATCTACATTTGCATACTGTATAAGG 3333 ||||| | | | | | |||||| |||||||||||||||| ||||||| Sbjct 3297 TTCAGTGCCTACTCTTGATTCAGAAGGTGATTTTGGTCTACATTTGCATACTATATAAGG 3356 Query 3334 CTGAACTACTGGAAAAA-TCTGGCTC---G-T---T--ACCATTTGTATAGATGAGCCTA 3383 |||||||| |||||||| | |||| | | | | |||||||||||||| | | || Sbjct 3357 CTGAACTAGTGGAAAAAAT-TGGCGCTATGGTGCATTTACCATTTGTATAGA-G--CTTA 3412 Query 3384 CAAGAACAATATCAGTCTATGCTTT 3408 ||||||| |||||||||||||||| Sbjct 3413 CAAGAACTGTATCAGTCTATGCTTT 3437 > AT5G60170.2 | Symbols: | RNA binding (RRM/RBD/RNP motifs) family protein | chr5:24227415-24232873 FORWARD LENGTH=3509 Length=3509 Score = 1129 bits (611), Expect = 0.0 Identities = 1080/1299 (83%), Gaps = 62/1299 (5%) Strand=Plus/Plus Query 87 ATGAGTGATTACGGTGAAAAGACTTG-CC-CTTTGTGTGCAGAGGAGATGGATTTGACTG 144 |||||||| | ||||| |||||||| || | || ||||| || ||||||||| |||||| Sbjct 145 ATGAGTGACCATGGTGAGAAGACTTGTCCAC-TT-TGTGCTGAAGAGATGGATCTGACTG 202 Query 145 ACCAGCAATTGAAGCCTTGCAAATGTGGCTATCAGATTTGTGTTTGGTGCTGGCACCACA 204 | || ||||||||||||||||||||||| |||||||||||||||||||||||||| |||| Sbjct 203 ATCAACAATTGAAGCCTTGCAAATGTGGTTATCAGATTTGTGTTTGGTGCTGGCATCACA 262 Query 205 TAATGGACATGGCAGAGAAAGATC-AATCAGAAGGGCGCTGTCCAGCTTGCCGTACTCCA 263 || ||||||||||||||||||||| ||| ||||||||| ||||||||||| || |||||| Sbjct 263 TAGTGGACATGGCAGAGAAAGATCAAAT-AGAAGGGCGTTGTCCAGCTTGTCGCACTCCA 321 Query 264 TATGATAAAGAAAAGATTGTTGGGATGACCGTTGATCAAGAGAGACTGACCTCTGAAGGC 323 ||||| |||||||||||||| |||||||| ||| || || || ||| | ||||||||| Sbjct 322 TATGACAAAGAAAAGATTGTAGGGATGACTGTTAATTGTGACAGTCTGGCTTCTGAAGGC 381 Query 324 AACATGGATCGCaa-aaaaaCACAAAAGTCAAAATTGAAATCTTCTGAAGGGAGAAAGC- 381 || ||||| ||||| || | | || |||||||||| |||||||||||||||||||||| Sbjct 382 AATATGGAGCGCAAGAAGATC-CAGAAGTCAAAATCAAAATCTTCTGAAGGGAGAAAGCA 440 Query 382 -C-ACTAACAAGTGTCCGAGTGGTTCGA-AGAAATCTTGTTTACATTGTTGGGTTGCCCC 438 | ||| || ||||| ||||| | || | || |||||||||||||||||||||||||| | Sbjct 441 ACAACTCACCAGTGTGCGAGT-GATCCAGAGGAATCTTGTTTACATTGTTGGGTTGCCTC 499 Query 439 TTAATCTAGCAGATGAAGATCTTCCCCAGCGTAATGAGTATTTTGGTCAGTATGGAAAGG 498 |||||||||| ||||||||||| | ||| | ||| || |||||||||||||||||||| | Sbjct 500 TTAATCTAGCCGATGAAGATCTACTCCAACATAAAGAATATTTTGGTCAGTATGGAAAAG 559 Query 499 TTCTAAAGGTTTCCATGTCCCGAACAGCAACAGGTCTCATCCAACAGTTCCCTAACAACA 558 ||||||||||||||||||||||||||||| | ||| |||||||||| ||||| ||||| | Sbjct 560 TTCTAAAGGTTTCCATGTCCCGAACAGCATCTGGTGTCATCCAACAATTCCCAAACAATA 619 Query 559 CATGCAGTGTATATATCACTTATGGCAAAGAGGAAGAGGCTGTTCGATGTATTCAATCTG 618 |||||||||||||||| |||||||| |||||||||||||||||||| || |||||| ||| Sbjct 620 CATGCAGTGTATATATTACTTATGGAAAAGAGGAAGAGGCTGTTCGCTGCATTCAAGCTG 679 Query 619 TCCATGGGTTTATCTTGGATGGTAAAGCACTGAAGGCATGTTTTGGGACAACAAAGTATT 678 | |||||||||||||||||||||||| || |||||||||||||||||||||| ||||||| Sbjct 680 TTCATGGGTTTATCTTGGATGGTAAACCATTGAAGGCATGTTTTGGGACAACCAAGTATT 739 Query 679 GTCATGCATGGTTAAGAAACGCGACATGCAACAATCCTGATTGCCTCTATTTGCATGAGG 738 ||||||||||| | ||||| | | ||||| |||||||||||| ||||||||||| |||| Sbjct 740 GTCATGCATGGCTGAGAAATGTGGCATGCGTCAATCCTGATTGTCTCTATTTGCACGAGG 799 Query 739 TTGGCTCTCAAGAGGATAGTTTTACAAAAGATGAGATCATATCAGCCTATACAAGG-GT- 796 |||| |||||||| ||||| || ||||||||||||||||||||||||||||||||| || Sbjct 800 TTGGTTCTCAAGATGATAGCTTCACAAAAGATGAGATCATATCAGCCTATACAAGGAGTA 859 Query 797 ---T-CAGCAAATCACTGGAGCAACAAATACTATGCAATACCGTTCAGGGAGCATGCTAC 852 | || |||||||||||||||||||||| | |||| ||| |||||||| |||||||| Sbjct 860 GAGTTCAACAAATCACTGGAGCAACAAATATTCTGCAGCACCATTCAGGGAACATGCTAC 919 Query 853 CTCCACCATTGGATGCTTATGGCAGTGACAGTTCTACTGCGAATCCAATTGCAAAAGTTC 912 |||||||| ||||||||||| |||||||||||||| |||| || |||||| ||| |||| Sbjct 920 CTCCACCACTGGATGCTTATTGCAGTGACAGTTCTTCTGCAAAACCAATTATAAAGGTTC 979 Query 913 CTTCTACTACTTCAGTTAGTGCTCCTAGG-AGTTCTCCACC---T---AGTGGGAGCTCT 965 |||| |||| | || ||||| ||| ||| | |||||| || | ||||||||||| Sbjct 980 CTTCAACTAATGCAACTAGTGTTCCCAGGTA-TTCTCCGCCAAGTGGGAGTGGGAGCTCC 1038 Query 966 GGTAAATCAACTGCGCTTCCTGCTGCAGCATCATGGGGGGCACGTTTAACAAATCAACAC 1025 | | ||| ||||| |||||||||||||| ||||||||| || | || ||| Sbjct 1039 AGCAGATCCACTGCCCTTCCTGCTGCAGCGTCATGGGGG--AC----A-CA--TCAG--- 1086 Query 1026 TCTTTAGCAACTTCAG-CTTTGTCAAATGGATCTT-TGGATA-ATCAAAGATCAACATCA 1082 |||||||||||||| | | ||||||||||||| || ||| | ||||||||||||||| Sbjct 1087 TCTTTAGCAACTTCGGTCACC-TCAAATGGATCTTCTG-ATATA-CAAAGATCAACATCA 1143 Query 1083 GAGAATGGAACTTTGGC-TATGTCTACAGTTGTTGCAAATGCAGCTCATGGGCCTGTAAC 1141 | ||||||||| || | | | ||| | ||||||||||| |||||||||||||||||| | Sbjct 1144 GTGAATGGAACCTTACCCTTT-TCTGCTGTTGTTGCAAACGCAGCTCATGGGCCTGTATC 1202 Query 1142 CTCTAGTAACACTCTTCAGAA-ACCACCTCTTAAGGAAGAAATTCAAACA-TTGGCTGAA 1199 ||||| | ||| |||| | || |||| ||| || ||||||| |||| | || || | Sbjct 1203 CTCTAATGACATTCTTAA-AAGACCATCTCGCAAAGAAGAAAGCCAAATAGTTA--TGGA 1259 Query 1200 AAAAG-CAATCCTAGCGTGTTTAAGCCTTTGCAGCAGAA-GATTGTGTTGGATTCTGGGT 1257 |||| ||| ||||| ||||| ||||| |||||||| || | ||||| | |||||||| Sbjct 1260 CAAAGTCAAACCTAGTGTGTTGAAGCCCTTGCAGCATAATG-TTGTGGT---TTCTGGGT 1315 Query 1258 CCAAGAGAACTACATCACCTAATAGAGATCCTAGTAGCAATCAGAT-ATCCTGTTTAGAA 1316 || |||||| ||| |||| |||||||||||| |||||||| | | |||| ||| || | Sbjct 1316 CCGAGAGAATTACCGCACCCGATAGAGATCCTACTAGCAATC-GTTTATCCAGTTCAGTA 1374 Query 1317 GAATCTTCCTACAATAG-CAGAGTCATTGACAAGCCTTC 1354 || ||| ||||| || ||||| ||||||| ||||||| Sbjct 1375 GACTCTGCCTACGG-AGGCAGAGACATTGACCAGCCTTC 1412 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 169614434283 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5