BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg485068
Length=1469
Score E
Sequences producing significant alignments: (Bits) Value
AT2G39310.1 | Symbols: JAL22 | jacalin-related lectin 22 | chr2... 1485 0.0
AT2G39330.1 | Symbols: JAL23 | jacalin-related lectin 23 | chr2... 1044 0.0
> AT2G39310.1 | Symbols: JAL22 | jacalin-related lectin 22 | chr2:16414073-16416815
REVERSE LENGTH=1610
Length=1610
Score = 1485 bits (804), Expect = 0.0
Identities = 903/949 (95%), Gaps = 13/949 (1%)
Strand=Plus/Plus
Query 486 GATGCCCAAGGTGGTACAGACGGGCGTGTTTGGGATGATGGTTCTTACGACGGCGTTAAA 545
|||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||
Sbjct 534 GATGCCCAAGGTGGTACAGACGGGCGTGTTTGGGATGATGGTTCTTACGATGGCATTAAA 593
Query 546 ACGCTGCGTATTGGTCAAGATAATTCTCGTATCACTTATTTAGA-GTTCGAGTACGAGAA 604
||||||||||||| |||||||||||||||||||||||||||||| ||| |||||||||||
Sbjct 594 ACGCTGCGTATTGATCAAGATAATTCTCGTATCACTTATTTAGAGGTT-GAGTACGAGAA 652
Query 605 AGGTGGGGAATCAAAGACATGTAACCATGGGGGGAAAGGAGATACACCATCCGAGTTTGT 664
|| |||||| |||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 653 AGACGGGGAAGCAAAAACATGTAACCATGGGGGGAAAGGAGATACACCATCCGAGTTTGT 712
Query 665 GCTTGGTTACACAGACGAATACATCAAATCGGTGGAAGCAACCTATCAAAAGCCAAATAT 724
|||||||||| |||| |||||||||||||||||||||||||||||||| |||||||| ||
Sbjct 713 GCTTGGTTACCCAGATGAATACATCAAATCGGTGGAAGCAACCTATCAGAAGCCAAACAT 772
Query 725 TTTTAGCAATACCGTC-ATTACGTCACTTAAGTTC-GAAGCATCAAAGGGGAGAACATCA 782
||||||||||| || | |||||||||||||||||| || ||||||||||||||||||||
Sbjct 773 TTTTAGCAATA-CGGCAATTACGTCACTTAAGTTCTTAA-CATCAAAGGGGAGAACATCA 830
Query 783 TTCTTTGGGTATAATGTGGGTAAGAAGTTTGTGTTGGAGCAAAAGGGTCATAGGCTTGTT 842
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 831 TTCTTTGGGTATAATGTGGGTAAGAAGTTTGTGTTGGAGCAAAAGGGTCATAGGCTTGTC 890
Query 843 GGGTTCCACGGAAAGGAAGATGCAGCTATTGATGCTCTTGGAGCATATTTTGGACCTGTT 902
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 891 GGGTTCCATGGAAAGGAAGATGCAGCTATTGATGCTCTTGGAGCATATTTTGGACCTGTT 950
Query 903 CCTACTCCTACTCCTTTGATTCCATCCAAGAAACTACCAGCAATAGGCGGCAACGAAGGA 962
|||||||||||||| ||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct 951 CCTACTCCTACTCCCTTGATTCCATCTAAGAAACTACCAGCGATAGGCGGCAACGAAGGA 1010
Query 963 GTTACATGGGATGATGGTGTCTACGACGGTGTAAGGAAGATACTTGTAGGACAAGGTAAC 1022
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1011 GTTACATGGGATGATGGTGTCTACGACGGTGTAAGGAAGATACTTGTAGGACAAGGTAAC 1070
Query 1023 GACGGTGTATCCTTTGTCAAGTTTGAGTACAGTAAGGGCAAAGAACTTGTATCCGGAGAT 1082
|| ||||||||||||||||| ||||||||||||||||||||||| |||||| ||||||||
Sbjct 1071 GATGGTGTATCCTTTGTCAAATTTGAGTACAGTAAGGGCAAAGACCTTGTACCCGGAGAT 1130
Query 1083 GACCATGGGAAGGAGACATTACTCGGAGCTGAAGAGTTTGTGCTTGAAGATGGTGAATAT 1142
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1131 GACCATGGGAAGAAGACATTACTCGGAGCTGAAGAGTTTGTGCTTGAAGATGGTGAATAT 1190
Query 1143 CTCAT-AACCATAGATGGCTACTACGATAAGATCTTTGGAGTCGAGGAACCAACAATTGT 1201
||||| || ||||||||||||||||||||||||||| ||||| |||||||||| ||||||
Sbjct 1191 CTCATGAA-CATAGATGGCTACTACGATAAGATCTTCGGAGTTGAGGAACCAATAATTGT 1249
Query 1202 CTGTCTTCAGTTTAAGACCAACAAAAGGGAGTCAATGCCGTTTGGAATGGATTCTGGTAA 1261
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1250 ATGTCTTCAGTTTAAGACCAACAAAAGGGAGTCAATGCCGTTTGGAATGGATTCTGGTAA 1309
Query 1262 GAAGTTCTCGCTTGGAGAGGAAGGCCATAAGATCGTTGGATTCCATGGACAAGCTAGCGA 1321
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct 1310 GAAGTTCTCGCTTGGAGAGGAAGGCCACAAGATCGTTGGATTCCATGGACAAGCTAGTGA 1369
Query 1322 TGTTGTTCACAGCATCGGAGTCACTATTGTGCCCATCACCACCACCGAGTAAAAAACCAG 1381
||||||||||||||||||||||||||| |||||||||||||||||||||| |||| ||||
Sbjct 1370 TGTTGTTCACAGCATCGGAGTCACTATCGTGCCCATCACCACCACCGAGTGAAAA-CCAG 1428
Query 1382 TCAGTCATATATA-TACAAAATGAAACTTCCAATAAGATTGGTGTGTGT 1429
| ||||||||||| |||| ||||||||||||||||||||| ||||||
Sbjct 1429 TTAGTCATATATACTACA---TGAAACTTCCAATAAGATTGGAGTGTGT 1474
Score = 691 bits (374), Expect = 0.0
Identities = 450/486 (93%), Gaps = 8/486 (2%)
Strand=Plus/Plus
Query 1 CTTCCATCAATCAGAGCTCAAGAATTTACTGATTTGAAATGGC-AAGGATGTACCGGAAG 59
||||||||| ||||||||||| |||| ||||||| |||||||| || |||||||||||||
Sbjct 7 CTTCCATCATTCAGAGCTCAATAATTAACTGATTCGAAATGGCGAA-GATGTACCGGAAG 65
Query 60 TTGGCACTCTGCGGTGGTGAAGGAGGA-AAGGAATGGGACGACGATGTATATGAGGGTGT 118
|||||||||||||||||||| |||||| || |||||||||||||||||||||||||||||
Sbjct 66 TTGGCACTCTGCGGTGGTGAGGGAGGACAA-GAATGGGACGACGATGTATATGAGGGTGT 124
Query 119 aaaaaaaGTGTATGTAGGGCAAGATCTCAACCGTATCACTTACATCAAATTTGAGTACGT 178
|| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 125 AAGAAAAGTGTATGTAGGGCAAGATCTCAACCGTATCACTTACATCAAGTTTGAGTACGT 184
Query 179 GAAGGAAGACAGCGAAGTAGTAACAACTTTATATGGGACAATAAATCAACACCCTAAAGA 238
| |||||||| ||||||||||||||||| ||||||||||| |||||| |||||||||||
Sbjct 185 GCAGGAAGACGGCGAAGTAGTAACAACTGAATATGGGACAACAAATCAGCACCCTAAAGA 244
Query 239 TTTTGTACTTCAATACCCAGACGAACACATCACAGCAGTGGAGGGAAGCTACCACCCAGT 298
|||||| |||||||||| ||||||||||||| ||||||||||||||| ||||||| |||
Sbjct 245 GTTTGTAATTCAATACCCGGACGAACACATCATAGCAGTGGAGGGAAGTTACCACCAAGT 304
Query 299 GGCTCTAATTGCCACGGAGGTAATTACGTCCCTCGTCTTCAAGACCTCAAAGGGTAGAT- 357
|||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct 305 GGCTCTCATTGCCACAGAGGTGATTACGTCCCTCGTCTTCAAGACCTCAAAGGGTAGAAA 364
Query 358 GCTCTCCAACGTTTGGTCCAAACTTA-TTCGGAATTACGAGCGGTACAAAGTTTGTTTTT 416
| |||||| |||||||||||||||| || |||||||||| |||||||||||||||||||
Sbjct 365 G-TCTCCATTGTTTGGTCCAAACTTACTT-GGAATTACGACCGGTACAAAGTTTGTTTTT 422
Query 417 GAGGACGAGGGAAAGAAGATCGTAGGGTTTCATGGACGGGCAGGTGATGCTCTCGACGCT 476
||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 423 GAGGATGAGGGAAAGAAGATCGTAGGGTTTCATGGACGGGCAGGTGATGCTGTCGACGCT 482
Query 477 CTTGGA 482
||||||
Sbjct 483 CTTGGA 488
> AT2G39330.1 | Symbols: JAL23 | jacalin-related lectin 23 | chr2:16419596-16421852
REVERSE LENGTH=1619
Length=1619
Score = 1044 bits (565), Expect = 0.0
Identities = 794/903 (88%), Gaps = 21/903 (2%)
Strand=Plus/Plus
Query 486 GATGCCCAAGGTGGTACAGACGGGCGTGTTTGGGATGATGGTTCTTACGACGGCGTTAAA 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 544 GATGCCCAAGGTGGTACAGACGGGCGTGTTTGGGATGATGGTTCTTACGACGGCGTTAAA 603
Query 546 ACGCTGCGTATTGGTCAAGATAATTCTCGTATCACTTATTTAGAGTTCGAGTACGAGAAA 605
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 604 TCGCTGCGTATTGGTCAAGATAATTCTCGTATTACTTATTTAGAGTTCGAGTACGAGAAA 663
Query 606 GGTGGGGAA-TCAAAGACATGTAACCATGGGGGGAAAGGAGATACACCATCCGA-GTTTG 663
|| || || | | |||||||| |||||||| |||| ||| | | || | || |||||
Sbjct 664 GGCGGT-AAGTTAGAGACATGTCGCCATGGGGTGAAACAAGAAAGATCA-CTGAAGTTTG 721
Query 664 TGCTTGGTTACACAGACGAATACATCAAATCGGTGGAAGCAACCTATCA-AAAGCCAAAT 722
|||| || | || |||||||||||||||||||||||||||||| | ||| || |
Sbjct 722 AGCTTA---ACCCGGATGAATACATCAAATCGGTGGAAGCAACCTATGATAAA-CCGGAC 777
Query 723 ATTTTTAGCAATACCGTCATTACGTCACTTA-AGTTCGAAGCATCAAAGGGGAGAACATC 781
||||| ||||| ||||||||| || |||| | || ||| |||| ||||||||||| ||
Sbjct 778 ATTTTCCGCAATGTCGTCATTACATCGCTTACATTT-GAAACATCGAAGGGGAGAACGTC 836
Query 782 ATTCTTTGGGTATAATGTG-GGTAAGAAGTTTGTGTTGGAGCAAAAGGGTCATAGGCTTG 840
||||| ||||||||| | | |||||||||||| | | ||||||||||||| ||||||||
Sbjct 837 ATTCTCTGGGTATAAGG-GAGGTAAGAAGTTTAAGCTAGAGCAAAAGGGTCGTAGGCTTG 895
Query 841 TTGGGTTCCACGGAAAGGAAGATGCAGCTATTGATGCTCTTGGAGCATATTTTGGACCTG 900
| |||||||| |||||||||| | ||||||||||||| |||||||||||||||| ||||
Sbjct 896 TCGGGTTCCATGGAAAGGAAGGTTCAGCTATTGATGCCCTTGGAGCATATTTTGCACCTA 955
Query 901 TTCCTACTCCTACTCCTTTGATTCCATCCAAGAAACTACCAGCAATAGGCGGCAACGAAG 960
|||||||||| |||||| | |||||| ||||||||||||||||||||||||||| || ||
Sbjct 956 TTCCTACTCCGACTCCTATAATTCCAGCCAAGAAACTACCAGCAATAGGCGGCAGCGGAG 1015
Query 961 GAGTTACATGGGATGATGGTGTCTACGACGGTGTAAGGAAGATACTTGTAGGACAAGGTA 1020
||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1016 GAGTTGCATGGGATGATGGTGTCTACGATGGTGTAAGGAAGATACTTGTAGGACAAGGTA 1075
Query 1021 ACGACGGTGTATCCTTTGTCAAGTTTGAGTACAGTAAGGGCAAAGAACTTGTATCCGGAG 1080
|||| |||||| |||||||||||||||| |||| ||| || ||||| |||||||| ||||
Sbjct 1076 ACGATGGTGTAGCCTTTGTCAAGTTTGAATACAATAAAGGAAAAGATCTTGTATCTGGAG 1135
Query 1081 ATGACCATGGGAAGGA-GACATTACTCGGAGCTGAAGAGTTTGTGCTTGAAGATGGTGAA 1139
|||||||||||||| | ||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1136 ATGACCATGGGAAG-ATGACATTACTCGGAACTGAAGAGTTTGTGCTTGAAGATGGTGAA 1194
Query 1140 TATCTCATAACCATAGATGGCTACTACGATAAGATCTTT-GGAGTCGAGGA-ACCAACAA 1197
||||||| ||||||||||||| ||||||||||| ||| ||||||||| | ||||| |
Sbjct 1195 TATCTCACGGCCATAGATGGCTATTACGATAAGAT-TTTCGGAGTCGAG-ACACCAATGA 1252
Query 1198 TTGTCTGTCTTCAGTTTAAGACCAACAAAAGGGAGTCAA-TGCCGTTTGGAATGGATTCT 1256
|| ||||||||||||||||||| |||||||||||||||| | || || |||||||||||
Sbjct 1253 TTATCTGTCTTCAGTTTAAGACGAACAAAAGGGAGTCAACT-CCATTCGGAATGGATTCG 1311
Query 1257 GGTAAGAAGTTCTCGCTTGGAGAGGAAGGCCATAAGATCGTTGGATTCCATGGACAAGCT 1316
||| |||||||||||||||||||| ||||||| |||||||| |||||||| |||||||||
Sbjct 1312 GGTGAGAAGTTCTCGCTTGGAGAGAAAGGCCACAAGATCGTCGGATTCCACGGACAAGCT 1371
Query 1317 AGCGATGTTGTTCACAGCATCGGAGTCACTATTGTGCCCATCACCACCACCGAGTAAAAA 1376
|| ||||||||||||||||||||||||||| | |||||||| |||| |||| ||| ||||
Sbjct 1372 AGTGATGTTGTTCACAGCATCGGAGTCACTGTCGTGCCCATTACCAACACCAAGTGAAAA 1431
Query 1377 ACC 1379
|||
Sbjct 1432 ACC 1434
Score = 442 bits (239), Expect = 5e-123
Identities = 385/454 (85%), Gaps = 16/454 (4%)
Strand=Plus/Plus
Query 37 AAATGGC-AAGGATGTACCGGAAGTTGGCACTCTGCGGTGGTGAAGGAGGAAAG-GAATG 94
||||||| || || |||||||||||| || || ||||||||||||||| | |||||
Sbjct 47 AAATGGCGAA-AATCTACCGGAAGTTGACAGGCTACGGTGGTGAAGGAGG-GCGTGAATG 104
Query 95 GGACGACGATGTATATGAGGGTGTaaaaaaaGTGTATGTAGGGCAAGATCTCAACCGTAT 154
|||||| ||||||||||||||||||| ||||||||||||||| |||||| |||| |||||
Sbjct 105 GGACGATGATGTATATGAGGGTGTAAGAAAAGTGTATGTAGGACAAGATATCAATCGTAT 164
Query 155 CACTTACATCAAATTTGAGTACGTGAAGGAAGACAGCGAAGTAGTAACAACTTTATATGG 214
||||||| ||||||| ||||| |||||||||||| || |||| ||||||||| ||||||
Sbjct 165 CACTTACGTCAAATTCGAGTATGTGAAGGAAGACGGCCAAGTCGTAACAACTGAATATGG 224
Query 215 GACAATAAATCAAC-ACCCTAAAGATTTTGTACTTCAATACCCAGACGAACACATCACAG 273
|| ||| | ||||| |||| ||||| |||||||||||||| || |||||||| |||| ||
Sbjct 225 GAAAATCATTCAACAACCC-AAAGAGTTTGTACTTCAATATCCGGACGAACATATCATAG 283
Query 274 CAGTGGAGGGAAGCTACCACCCAGTGGCTCTAAT-TGCCACGGAGGTAATTACGTCCCTC 332
| ||||| |||| ||| | | ||||||||| || |||||| ||||| || || ||||
Sbjct 284 CGGTGGAAGGAAACTATCGCGGAGTGGCTCT-ATGTGCCACAGAGGTGATCACAAACCTC 342
Query 333 GTCTTCAAGACCTCAAAGGGTAGAT-GCTCTCCAAC-GTTTGGTCCAAACTTA-TTCGGA 389
|||||||||||||||||||||||| | || ||| | ||||||||||||||| || |||
Sbjct 343 GTCTTCAAGACCTCAAAGGGTAGAAAG-TCACCA-CTGTTTGGTCCAAACTTGCTT-GGA 399
Query 390 ATTACGAGCGGTACAAAGTTTGTTTTTGAGGACG-AGGGAAAGAAGATCGTAGGGTTTCA 448
||||||| |||||||||||| ||| ||||||| | ||| |||||||||||||||||||||
Sbjct 400 ATTACGACCGGTACAAAGTTCGTTATTGAGGATGGAGG-AAAGAAGATCGTAGGGTTTCA 458
Query 449 TGGACGGGCAGGTGATGCTCTCGACGCTCTTGGA 482
||||||| | ||| ||||||||||||| ||||||
Sbjct 459 TGGACGGTCGGGTAATGCTCTCGACGCGCTTGGA 492
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 72439386435
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5