BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg485364 Length=978 Score E Sequences producing significant alignments: (Bits) Value AT3G50060.1 | Symbols: MYB77 | myb domain protein 77 | chr3:185... 1062 0.0 AT5G67300.1 | Symbols: ATMYBR1, ATMYB44, MYBR1, MYB44 | myb dom... 292 3e-78 > AT3G50060.1 | Symbols: MYB77 | myb domain protein 77 | chr3:18557970-18559106 REVERSE LENGTH=1137 Length=1137 Score = 1062 bits (575), Expect = 0.0 Identities = 785/876 (90%), Gaps = 56/876 (6%) Strand=Plus/Plus Query 1 AAAAGATCTGTTTCAATGGCGGATCGTGTTAAAGGTCCATGGAGTCAAGAAGAAGATGAG 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 41 AAAAGATCTGTTTCAATGGCGGATCGTGTTAAAGGTCCATGGAGTCAAGAAGAAGATGAG 100 Query 61 CAGCTACGTAGGATGGTGGAGAAATACGGTCCGAGGAATTGGTCGGCGATTAGCAAATCG 120 |||||||| |||||||| ||||||||||| |||||||||||||| ||||||||||||||| Sbjct 101 CAGCTACGAAGGATGGTTGAGAAATACGGACCGAGGAATTGGTCTGCGATTAGCAAATCG 160 Query 121 ATTCCAGGTCGATCTGGTAAATCGTGTAGATTACGGTGGTGTAATCAGTTATCTCCGGAG 180 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 161 ATTCCAGGTCGATCTGGTAAATCGTGTAGATTACGTTGGTGTAATCAGTTATCTCCGGAG 220 Query 181 GTTGAGCACCGTCCTTTCTCGCCGGAGGAGGATGAGACTATTGTAACGGCTCGTGCTAAG 240 |||||||| |||||||||||||||||||| ||||||||||||||||| || |||||| || Sbjct 221 GTTGAGCATCGTCCTTTCTCGCCGGAGGAAGATGAGACTATTGTAACCGCCCGTGCTCAG 280 Query 241 TTTGGTAACAAATGGGCGACGATTGCTCGTCTTCTCAACGGTCGTACGGATAACGCCGTT 300 ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 281 TTTGGTAACAAGTGGGCGACGATTGCTCGTCTTCTTAACGGTCGTACGGATAACGCCGTT 340 Query 301 AAAAATCACTGGAACTCGACGCTTAAGAGGAAATGCAGCGGAGGTGTGGCGGCGGTGACG 360 ||||||||||||||||| |||||||||||||||||||||||||||||||||| | ||| Sbjct 341 AAAAATCACTGGAACTCTACGCTTAAGAGGAAATGCAGCGGAGGTGTGGCGGT--T-ACG 397 Query 361 GCGACGACGGTGACGGAGACGGAGGAGGAGGAGTATCGGCCGAAGAAGAGGAGATCTGTG 420 ||| | |||||||||||||||| || || ||||||||||||||||||||||||| Sbjct 398 ---ACG--G-TGACGGAGACGGAGGAAGATCAGGATCGGCCGAAGAAGAGGAGATCTGTT 451 Query 421 AGCTTTGATTCTGCTTTTGCTCCGGT-----C-G-AT---AC-TGAG-----AG--TCCT 462 |||||||||||||||||||||||||| | | || || |||| || |||| Sbjct 452 AGCTTTGATTCTGCTTTTGCTCCGGTGGATACTGGATTGTACATGAGTCCTGAGAGTCCT 511 Query 463 AACGGATTCGATGTTAGTGATTCAAGCACGGTTCCGTCTCCGTCGTCTCCTGTTGCTCAG 522 |||||| |||||||||||||||| |||||| ||||||| ||||||||||||||||||||| Sbjct 512 AACGGAATCGATGTTAGTGATTCTAGCACGATTCCGTCACCGTCGTCTCCTGTTGCTCAG 571 Query 523 CTTTTTAAACCAATGCCGATTTCCGGCGG------G------CCG------TTACCGGTT 564 || |||||||||||||||||||||||||| | ||| ||||||||| Sbjct 572 CTGTTTAAACCAATGCCGATTTCCGGCGGTTTTACGGTGGTTCCGCAGCCGTTACCGGTT 631 Query 565 GAAATGTCTTCGTCTTCGGAGGATCCGACA-ACGTCGTTGAGTTTGTCACTACCTGGAGC 623 |||||||||||||||||||||||||| || || |||||||||||||||||||||||||| Sbjct 632 GAAATGTCTTCGTCTTCGGAGGATCC-ACCTACTTCGTTGAGTTTGTCACTACCTGGAGC 690 Query 624 TGAGAACACGAGTTCGAACTACATCAACAACAACAACGCGTTGATGTTTCCGAGATTTGA 683 ||||||||||||||||| | | | ||| |||||||||||||||||||||||||||||||| Sbjct 691 TGAGAACACGAGTTCGAGCCATAACAATAACAACAACGCGTTGATGTTTCCGAGATTTGA 750 Query 684 GAGTCAGATGAAGATTAATGTagaggagagaggaggaggagaAGGACGTAGAGGTGAGTT 743 ||||||||||||||||||||||||||||||||||| | || | ||||||||||||||| Sbjct 751 GAGTCAGATGAAGATTAATGTAGAGGAGAGAGGAG-A--AG--G-ACGTAGAGGTGAGTT 804 Query 744 TATGACGGTGGTGCAAGAGATGATTAAAGCTGAAGTGAGGAGTTACATGGCGGAGATGCA 803 ||||||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct 805 TATGACGGTGGTGCAGGAGATGATAAAAGCTGAAGTGAGGAGTTACATGGCGGAAATGCA 864 Query 804 GAAAACGAGTGGTGGTGGATTCGTCGTCGGAGGTTT 839 |||||| |||||||| |||||||||||||||||| Sbjct 865 GAAAACAAGTGGTGG---ATTCGTCGTCGGAGGTTT 897 Score = 91.6 bits (49), Expect = 1e-17 Identities = 54/56 (96%), Gaps = 1/56 (2%) Strand=Plus/Plus Query 924 aaaa-aaaaTGTACAGATGAATTAAAATTTCTATGGAATAATCTTAAATCTCAAAT 978 |||| |||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 1044 AAAACAAAATGTACAGAGGAATTAAAATTTCTATGGAATAATCTTAAATCTCAAAT 1099 > AT5G67300.1 | Symbols: ATMYBR1, ATMYB44, MYBR1, MYB44 | myb domain protein r1 | chr5:26854022-26856006 FORWARD LENGTH=1985 Length=1985 Score = 292 bits (158), Expect = 3e-78 Identities = 276/333 (83%), Gaps = 8/333 (2%) Strand=Plus/Plus Query 13 TCAATGGCGGATCGTG-TTAAAGGTCCATGGAGTCAAGAAGAAGATGAGCAGCTACGTAG 71 |||||||| ||| | | | |||||||||||||||| |||||||| |||||||| ||||| Sbjct 85 TCAATGGCTGATAG-GATCAAAGGTCCATGGAGTCCTGAAGAAGACGAGCAGCTTCGTAG 143 Query 72 GATGGTGGAGAAATACGGTCCGAGGAATTGGTCGGCGATTAGCAAATCGATTCCAGGTCG 131 | | || | ||||||||||| || || ||| | | |||||||||||| ||||| ||| | Sbjct 144 GCTTGTTGTTAAATACGGTCCAAGAAACTGGACAGTGATTAGCAAATCTATTCCCGGTAG 203 Query 132 ATCTGGTAAATCGTGTAGATTACGGTGGTGTAATCAG-TTATCTCCGGAGGTTGAGCACC 190 ||| || ||||||||| | ||||||||||| || ||| || || ||| | |||||||| | Sbjct 204 ATCGGGGAAATCGTGTCGTTTACGGTGGTGCAACCAGCTT-TCGCCGCAAGTTGAGCATC 262 Query 191 GTCC-TTTCTCGCCGGAGGAGGATGAGACTATTGTAACG-GCTCGTGCTAAGTTTGGTAA 248 | || ||| ||| | ||||| || ||||| || | ||| |||| ||| |||| ||||| Sbjct 263 GGCCGTTT-TCGGCTGAGGAAGACGAGACGATCG-CACGTGCTCACGCTCAGTTCGGTAA 320 Query 249 CAAATGGGCGACGATTGCTCGTCTTCTCAACGGTCGTACGGATAACGCCGTTAAAAATCA 308 ||||||||||||||||||||||||||||||||||||||||| |||||||| || ||||| Sbjct 321 TAAATGGGCGACGATTGCTCGTCTTCTCAACGGTCGTACGGACAACGCCGTGAAGAATCA 380 Query 309 CTGGAACTCGACGCTTAAGAGGAAATGCAGCGG 341 ||||||||||||||| |||||||||||| |||| Sbjct 381 CTGGAACTCGACGCTCAAGAGGAAATGCGGCGG 413 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 47873142091 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5