BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg485583 Length=1412 Score E Sequences producing significant alignments: (Bits) Value AT3G52190.1 | Symbols: PHF1 | phosphate transporter traffic fac... 2115 0.0 > AT3G52190.1 | Symbols: PHF1 | phosphate transporter traffic facilitator1 | chr3:19353972-19357074 REVERSE LENGTH=1506 Length=1506 Score = 2115 bits (1145), Expect = 0.0 Identities = 1294/1363 (95%), Gaps = 21/1363 (2%) Strand=Plus/Plus Query 62 GATCCAAATTGGAGAGAGAGACCAAAGAGGAAATTAATTATCAATCAAT-C--CAACGAA 118 |||||||||| || |||||||||||||||||||||| || |||||||| | ||||||| Sbjct 109 GATCCAAATT--AGGGAGAGACCAAAGAGGAAATTAA-TAACAATCAATCCAACAACGAA 165 Query 119 TGGCGATTGAAGAAGCGAGTCGTGAAAGTGGACATGTTGTGTGCGGATCATGGATTCGTC 178 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 166 TGGAGATTGAAGAAGCGAGTCGTGAAAGTGGACATGTTGTGTGCGGATCATGGATTCGTC 225 Query 179 GCCCAAAGAAAGTAAACTGGGTTCTTATCGCTAAAGCTTCTAAACGCCGTGGCTCATCTG 238 |||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 226 GCCCGAAGAAAGTAAACTGGGTTCTTATCGCTAAAGCTTCCAAACGCCGTGGCTCATCTG 285 Query 239 TTTCTTCTCCTGCTCTCCTCAACATCTTCTCTTTTGACTCCGTTACTGCTTCCCTCTCCT 298 |||||||||||||||||||||||||||||||||||||| || |||||||||| || |||| Sbjct 286 TTTCTTCTCCTGCTCTCCTCAACATCTTCTCTTTTGACCCCATTACTGCTTCTCTTTCCT 345 Query 299 CCTCTCCCTTGGCAACACATACGCTAAAGGAGAGTGATGGTGATCCTGTGACTGTTTCAG 358 ||||||| ||||||||||| ||||| ||||| |||||||||||||||||| ||||||||| Sbjct 346 CCTCTCCTTTGGCAACACACACGCTTAAGGATAGTGATGGTGATCCTGTGGCTGTTTCAG 405 Query 359 TGCATCCTGGTGGAGATTACTTTGTTTGCTCAACCTCCAAAGGTGGTTGCAAGTCATTTG 418 |||| |||||||| |||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 406 TGCACCCTGGTGGGGATTACTTTGTTTGCTCAACCTCCAAAGGTGGTTGCAAGTTATTTG 465 Query 419 AGATTGTTGGAGGAGCAACAGGTATTACGATCTTAGCCAAAGAACTCCTTCCTCTCCAAA 478 || |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 466 AGCTTGTCGGAGGAGCAACAGGTATTACGATCTTAGCCAAAGAACTCCTTCCTCTCCAAA 525 Query 479 ATGCTGGACTACAAAAGTGTATGGCCTTCAGCTTTGATGGGTCTAAACTAGCTGTTGGTG 538 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | Sbjct 526 ATGCTGGACTACAAAAGTGTATGGCCTTCAGCTTTGATGGGTCTAAATTAGCTGTTGGGG 585 Query 539 GAGTGGATGGGTGTCTCAGAATTATGGAGTGGCCAAACCTACA-TGTAATTTTGGATGAG 597 |||||||||| ||||| |||||||||||||||||||||||| | |||||||||||||||| Sbjct 586 GAGTGGATGGATGTCTTAGAATTATGGAGTGGCCAAACCTA-AGTGTAATTTTGGATGAG 644 Query 598 CCAAAGGCACACAAATCCATCCGGGACATGGATTTTAGTCTTGACTCAGAGTTCTTAGCT 657 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 645 CCAAAGGCACACAAATCCATCCGGGACATGGATTTTAGTCTTGACTCAGAGTTCTTAGCT 704 Query 658 ACAACATCAACTGATGGATCAGCTAGAATATGGAAAGCAGAAGATGGTTTTCCTTTGTCT 717 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 705 ACAACATCAACTGATGGATCAGCTAGAATATGGAAAGCAGAAGATGGTTTTCCTTTGTCT 764 Query 718 ACTTTGGAACGTAGTGGGGATGAAAATATTGAACTGTGCCGTTTCTCTAAAGATGGAACA 777 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 765 ACTTTGGAACGTAGTGGGGATGAAAATATTGAACTGTGCCGTTTCTCTAAAGACGGAACA 824 Query 778 AAACCTTTTTTGTTTTGTGCTGCTCAAAAAGGTGATACGCCTGTGGTCAATGTTTATGAC 837 |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| Sbjct 825 AAACCTTTTTTGTTTTGTGCTGCTCAAAGAGGTGATACGCCTATGGTCAATGTTTATGAC 884 Query 838 ATTAGTACATGGAAGAAGCTTGGGTTCAAGAAGCTGTCAAGGAAGACTGCATCGACAATG 897 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 885 ATTAGTACATGGAAGAAGCTTGGGTTCAAGAAGCTGTCAAGGAAGACTGCATCGACAATG 944 Query 898 GCAGTGAGCTTGGATGGGAAATATATTGCTTTGGGTGGGAAAGATGGAGATGTATCTGTT 957 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 945 GCAGTGAGCTTGGACGGGAAATATATTGCTTTGGGTGGGAAAGATGGAGATGTATCTGTT 1004 Query 958 GCTGAAGTTAAGACAATGGAAATCTACCACTACAGTAAGAGGCTACATCTTGGTCAATCC 1017 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 1005 GCTGAAGTTAAGACAATGGAAATCTACCACTACAGTAAGAGGCTGCATCTTGGTCAATCC 1064 Query 1018 ATTGCTTCACTTGAGTTCTGCCCTAGTGAAAGGGTTATACTGACAACTTCGAGTGAATGG 1077 ||||||||||||||||||||||| |||||||||||||| ||||||||||| || |||||| Sbjct 1065 ATTGCTTCACTTGAGTTCTGCCCCAGTGAAAGGGTTATGCTGACAACTTCTAGCGAATGG 1124 Query 1078 GGTGAGATGGTGACCAAACTCAGTGTACCAAAGGAGTGGAAAGAGTGGCAGATATATGCA 1137 || ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 1125 GGAGAGATGGTGACCAAACTCACTGTACCAAAGGAGTGGAAAGAGTGGCAGATATATGCA 1184 Query 1138 CTGCTGTTTTGCTTGTTCATGGCATCAGTGATAGCTGCATACGTTTTCTTCGAGAACTCA 1197 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 1185 CTGCTGTTTTGCTTGTTCATGGCATCAGTGATAGCTGCATACGTATTCTTCGAGAACTCA 1244 Query 1198 GATTCGTTTTGGCAGTTACCAATGGGGAAAGATCAGAAAAGACCAAAGATAAGTCTTTTT 1257 |||||||||||| ||||||||||||| |||||||| |||||||||||||| ||||| ||| Sbjct 1245 GATTCGTTTTGGAAGTTACCAATGGGAAAAGATCAAAAAAGACCAAAGATTAGTCTATTT 1304 Query 1258 GGAGGTTCCTCC---ACGCCTTCTGAGGATCATAGTAGGTGGAACTTGGACCTATAGAAA 1314 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1305 GGAGGTTCCTCCTCCACGCCTTCTGAGGATCATAGTAGGTGGAACTTGGACCTATAGAAA 1364 Query 1315 GTTTATGTAACTTTCCTCTGCtttttttttCTTCTTCTTCCAAATCTTGTTGCAATGttt 1374 | |||||||||||||||||||||||| || ||| | ||||| ||||||||||| |||| Sbjct 1365 GATTATGTAACTTTCCTCTGCTTTTTCTT-CTT-T-CTTCCTTATCTTGTTGCAGCGTTT 1421 Query 1375 ttttttC-------CCTTTCTTCTGATTTTGCTCTGACGAATA 1410 |||||| |||||||||||||||||||||||| |||| Sbjct 1422 TTTTTTGTTTTTTTCCTTTCTTCTGATTTTGCTCTGACAAATA 1464 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 69577955370 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5