BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg485659 Length=1575 Score E Sequences producing significant alignments: (Bits) Value AT3G52880.2 | Symbols: ATMDAR1, MDAR1 | monodehydroascorbate re... 2207 0.0 > AT3G52880.2 | Symbols: ATMDAR1, MDAR1 | monodehydroascorbate reductase 1 | chr3:19601213-19604454 REVERSE LENGTH=1753 Length=1753 Score = 2207 bits (1195), Expect = 0.0 Identities = 1362/1439 (95%), Gaps = 25/1439 (2%) Strand=Plus/Plus Query 140 GGATACGCAGCTAAGGAGTTTGCTAATCAAGGGGTTAAACCAGGAGAATTGGCTGTTATC 199 ||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||| Sbjct 236 GGATACGCAGCTAAGGAGTTTGCCAATCAAGGGGTTCAACCAGGAGAATTGGCTGTTATC 295 Query 200 TCGAAAGAGGCGGTGGCTCCATATGAACGCCCTGCACTTAGCAAGGGGTATTTGTTTCCT 259 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 296 TCGAAAGAGGCGGTGGCTCCATATGAACGCCCTGCACTTAGCAAGGGGTATTTGTTTCCT 355 Query 260 GAAGGGGCTGCTAGACTTCCAGGGTTCCATTGCTGTGTTGGTAGTGGTGGAGAAAAACTG 319 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 356 GAAGGGGCTGCTAGACTTCCAGGTTTCCATTGCTGTGTTGGTAGTGGTGGAGAAAAACTG 415 Query 320 CTTCCTGAATCCTACAAGCAGAAAGGGATTGAGTTGATACTAAGTACAGAAATAGTGAAA 379 |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| Sbjct 416 CTTCCTGAATCCTACAAGCAGAAAGGAATTGAGTTGATACTAAGCACAGAAATAGTGAAA 475 Query 380 GCTGATCT-TGCTGCCAAGAGTCTTGTCAGTGCAGCAGGGGATGTCTTCAAATATCAGAC 438 |||||||| | ||||||||||||||||||||||| | |||||||||||||| |||||||| Sbjct 476 GCTGATCTCT-CTGCCAAGAGTCTTGTCAGTGCAACTGGGGATGTCTTCAAGTATCAGAC 534 Query 439 TCTCATAATTGCAACTGAAAGCTTCTTACAAATTCTTACTGGAGAGGAAACATTGACTGA 498 |||||||||||||||| | ||| ||| | || || | | ||||||||| Sbjct 535 GCTCATAATTGCAACTG---G-TTC-TAC----TGTT-CT---CA-G----ATTGACTGA 576 Query 499 TTTTGGAGTAAAAGGTGCAGACTCTAAGAATATCCTTTATCTGAGGGAGATCGATGACGC 558 |||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||| || Sbjct 577 TTTTGGAGTAAAAGGTGCAGACTCTAAGAATATCCTCTATCTGAGAGAGATTGATGATGC 636 Query 559 CGACAAATTGGTTGAAGCAATTAAAGCTAAGAAAGGCGGAAAGGCTGTAGTTGTTGGTGG 618 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || Sbjct 637 CGACAAATTGGTTGAAGCAATTAAAGCTAAGAAAGGTGGAAAGGCTGTAGTTGTTGGCGG 696 Query 619 AGGTTACATTGGTCTTGAGCTTAGTGCAGCTTTGAGGATCAACAATTTTGATGTCACTAT 678 ||||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||| Sbjct 697 AGGTTACATTGGTCTTGAGCTTAGTGCAGTTTTAAGGATCAACAATTTAGATGTCACTAT 756 Query 679 GGTTTTCCCTGAACCTTGGTGCATGCCTAGGCTTTTCACCGCCGATATTGCTGCTTTCTA 738 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 757 GGTTTTCCCTGAACCTTGGTGCATGCCTAGGCTTTTCACCGCCGATATTGCTGCTTTCTA 816 Query 739 TGAGACTTACTATACAAACAAGGGAGTGAAGATCATTAAAGGAACAGTGGCATCTGGGTT 798 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 817 TGAGACTTACTATACAAACAAGGGAGTGAAGATCATTAAAGGAACAGTGGCATCTGGGTT 876 Query 799 CACTGCTCAGCCAAATGGAGAGGTGAAGGAAGTACAACTTAAGGATGGGAGGACACTGGA 858 ||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| Sbjct 877 CACAGCTCAGCCAAATGGAGAGGTGAAGGAAGTACAACTCAAGGATGGGAGGACATTGGA 936 Query 859 AGCCGACATTGTGATAGTTGGGGTTGGTGCAAAACCATTGACATCCTTATTCAAGGGACA 918 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 937 AGCCGACATTGTGATAGTTGGGGTTGGTGCAAAACCATTGACATCCTTATTCAAGGGACA 996 Query 919 GGTCGAAGAAGACAAAGGTGGAATTAAGACCGATGCATTCTTCAAAACAAGTGTTCCAGA 978 |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 997 GGTCGAGGAAGATAAAGGTGGAATTAAGACCGATGCATTCTTCAAAACAAGTGTTCCAGA 1056 Query 979 TGTCTATGCTGTTGGTGACGTTGCCACTTTCCCTTTGAAAATGTACGGAGACGTGAGAAG 1038 ||| || ||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 1057 TGTTTACGCTGTTGGTGACGTTGCTACTTTCCCTTTGAAAATGTACGGAGACGTGAGAAG 1116 Query 1039 GGTCGAGCATGTTGACCATTCCCGCAAATCAGCAGAGCAAGCTGTTAAGGCGATCAAAGC 1098 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1117 GGTCGAGCATGTTGACCATTCCCGCAAATCAGCAGAGCAAGCTGTTAAGGCGATCAAAGC 1176 Query 1099 GGCTGAGGGAGGTGCAGCGGTGGAGGAATACGACTATCTTCCATTCTTCTACTCTCGCTC 1158 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1177 GGCTGAGGGAGGCGCAGCGGTGGAGGAATACGACTATCTTCCATTCTTCTACTCTCGCTC 1236 Query 1159 CTTTGACCTCTCGTGGCAGTTCTATGGAGACAACGTAGGAGACTCTGTGTTGTTCGGAGA 1218 |||||| ||||| ||||||||||| |||||||||||||||||||||||||| || ||||| Sbjct 1237 CTTTGATCTCTCATGGCAGTTCTACGGAGACAACGTAGGAGACTCTGTGTTATTTGGAGA 1296 Query 1219 CAGCAATCCATCAAACCCAAAACCAAGATTTGGAGCATATTGGGTTCAAGGTGGTAAAGT 1278 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1297 CAGCAATCCATCAAACCCAAAACCAAGATTTGGAGCATATTGGGTTCAAGGTGGTAAAGT 1356 Query 1279 GGTTGGAGCATTCATGGAGGGAGGTAGTGGTGACGAGAACAAGGCTTTGGCTAAAGTCGC 1338 ||||||||||||||||||||||||||||||||| |||||||| || |||||||||||||| Sbjct 1357 GGTTGGAGCATTCATGGAGGGAGGTAGTGGTGATGAGAACAAAGCCTTGGCTAAAGTCGC 1416 Query 1339 CAAAGCTCGACCTTCTGCAGAGAGTCTTGAGGAGCTCACCAAACAAGGAATTTCGTTCGC 1398 ||||||||||||||||||||||||||| || |||||| |||||||||||||| ||||| Sbjct 1417 CAAAGCTCGACCTTCTGCAGAGAGTCTCGACGAGCTCGTGAAACAAGGAATTTCCTTCGC 1476 Query 1399 AGCTAAGATCTGAGTGAAACACAACCACCAAA-CAAACTCGCTTTTTCTCTTCCATGTTA 1457 |||||||||||||||||||||||||||||||| ||||||| | |||||||||| |||||| Sbjct 1477 AGCTAAGATCTGAGTGAAACACAACCACCAAAACAAACTCACGTTTTCTCTTCTATGTTA 1536 Query 1458 AAATAAAAACATATTTAGCAAATAATAAGTTGTGTGTTTGTATTGCCTCTCTAAAAACTC 1517 |||||||||| | |||||| | ||||||||||||||||||||||| ||||||||| ||| Sbjct 1537 AAATAAAAACTTGTTTAGCTA-TAATAAGTTGTGTGTTTGTATTGTCTCTCTAAA--CTC 1593 Query 1518 TATGAGAAGAGTATACGGCAGAGGAAACC-TGAACCACATTCACATTTTAGATCATGTG 1575 ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 1594 CATGAGAAGAGTCTACGGCAGAGGAAACCCTGAACCACATTCACATTTTAGATCATGTG 1652 Score = 224 bits (121), Expect = 2e-57 Identities = 133/139 (96%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 1 CATATTAGCCTTTTTGCTCTTTCTTTTCTTCTCCAACAAACCAACTTCAGCGACGAGATA 60 |||||||||||||||||||||||||| |||||| |||||||||||||||||||| ||||| Sbjct 1 CATATTAGCCTTTTTGCTCTTTCTTTGCTTCTCTAACAAACCAACTTCAGCGACAAGATA 60 Query 61 ACAAAACGCTTTCAGACGATCGGATAAAATGGCGGAGAAGAGCTTTAAGTACATCATCCT 120 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 ACAAAACGCTTTCACACGATCGGATAAAATGGCGGAGAAGAGCTTTAAGTACATCATCCT 120 Query 121 CGGCGGCGGTGTCTCAGCC 139 ||||||||| ||||| ||| Sbjct 121 CGGCGGCGGCGTCTCTGCC 139 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 77760644205 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5