BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg485669 Length=2100 Score E Sequences producing significant alignments: (Bits) Value AT3G52950.1 | Symbols: | CBS / octicosapeptide/Phox/Bemp1 (PB1... 3127 0.0 AT2G36500.1 | Symbols: | CBS / octicosapeptide/Phox/Bemp1 (PB1... 970 0.0 > AT3G52950.1 | Symbols: | CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein | chr3:19634455-19636819 FORWARD LENGTH=2142 Length=2142 Score = 3127 bits (1693), Expect = 0.0 Identities = 1879/1969 (95%), Gaps = 11/1969 (1%) Strand=Plus/Plus Query 1 GGAAACAAGAACAACCAATGAAAATTCGATAAATGGCTGAACACAATTGTTAAGAGCCGT 60 ||||||| |||||||||||||||| ||||||||||||| ||| ||||||||||||||||| Sbjct 1 GGAAACAGGAACAACCAATGAAAACTCGATAAATGGCTTAACTCAATTGTTAAGAGCCGT 60 Query 61 TTG-TTTTTGGCAACAAAAGTGCTCGAGACGA-AGAGGTTGAAGAAG-AGGAAGAAGAGA 117 ||| ||||||||||||||||||||||||| || ||| ||||||||| | |||||||||| Sbjct 61 TTGTTTTTTGGCAACAAAAGTGCTCGAGA-GAGAGACCTTGAAGAAGAAAGAAGAAGAGA 119 Query 118 CGAGTTTGATATCTAAAGGAATCATTTTTGACGGATTTAGGATCTAAGAAAACCCTAGAT 177 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 120 CGAGTTTGATATCTAAAGGAATCATTTTTGACGGATTTAGGATCTAAGTAAACCCTAGAT 179 Query 178 TGATTGAATATGAGTACTCAAGCGACGGGTCCTTCTTCAACATCAGGGAGGAGAAGCACT 237 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 180 TGACCGAATATGAGTACTCAAGCGACGGGTCCTTCTTCAACATCAGGGAGGAGAAGCAAT 239 Query 238 TCTAGTGTACGGCGAGGACCACCACCTTCTAAGAAACCAGTCCAATCAGAGAACGGAAGT 297 |||| |||||||||||||||||||||||||||||||||||| ||||||||||| |||||| Sbjct 240 TCTACTGTACGGCGAGGACCACCACCTTCTAAGAAACCAGTACAATCAGAGAATGGAAGT 299 Query 298 GTCAATGGTAACACCTCTAAACCCAATTCACCTCCTCCGCAACCTCCATCTCAAGCTCCT 357 || ||||| |||||||| |||||||||||||||||||| ||||||| ||||||||||||| Sbjct 300 GTTAATGGGAACACCTCAAAACCCAATTCACCTCCTCCTCAACCTCAATCTCAAGCTCCT 359 Query 358 TCTAATGGAGAGAGAACAGTGAAGAAGCTTCGGTTATCGAAAGCTCTCACTATTCCTGAA 417 |||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||| Sbjct 360 TCTAATGGAGAGAGAACAGTGAAGAAGCTTAGGTTATCGAAAGCTCTTACTATTCCTGAA 419 Query 418 GGAACTACTGTTTTCGATGCTTGTCGAAGGATGGCGGCTCGGCGTGTTGATGCTTGTTTG 477 ||||||||||||||||||||||||||||| ||||| ||| |||||||||||||||||||| Sbjct 420 GGAACTACTGTTTTCGATGCTTGTCGAAGAATGGCTGCTAGGCGTGTTGATGCTTGTTTG 479 Query 478 TTGACTGATTCAAGTGCGCTTCTTTCCGGGATTGTTACTGATAAAGATGTTGCTACAAGA 537 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 480 TTGACTGATTCAAGTGCGCTTCTTTCCGGGATTGTTACTGATAAAGATGTAGCTACAAGA 539 Query 538 GTGATTGCTGAAGGGTTGAGACCGGATCAAACTTTGGTCTCTAAGGTTATGACTAGGAAT 597 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 540 GTGATTGCTGAAGGGTTGAGACCGGATCAAACTTTGGTCTCTAAGGTTATGACTAGGAAT 599 Query 598 CCTATTTTTGTCACGTCTGATTCGTTGGCGCTTGAGGCTCTTCAGAAGATGGTTCAAGGG 657 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 600 CCTATTTTTGTTACTTCTGATTCGTTGGCGCTTGAGGCTCTTCAGAAGATGGTTCAAGGG 659 Query 658 AAATTTAGGCACTTGCCTGTTGTAGAGAATGGTGAAGTCATTGCTTTGTTGGATATTACA 717 || ||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 660 AAGTTTAGACACTTGCCTGTTGTGGAGAATGGTGAAGTCATTGCTTTGTTGGATATTACA 719 Query 718 AAGTGTTTGTATGATGCTATTTCTAGGATGGAGAAAGCTGCAGAGCAAGGCAGTGCTTTA 777 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 720 AAGTGTTTGTATGATGCTATTTCTAGGATGGAGAAAGCTGCAGAGCAAGGTAGTGCTTTA 779 Query 778 GCAGCTGCAGTGGAAGGTGTGGAGAAGCAATGGGGAAGCGGATATTCTGCGCCCTATGCT 837 || ||||||||||||||||||||||||||||||||||||||||||||||| || |||||| Sbjct 780 GCTGCTGCAGTGGAAGGTGTGGAGAAGCAATGGGGAAGCGGATATTCTGCACCGTATGCT 839 Query 838 TTCATTGAAACCTTGAGGGAGAGAATGTTTAAGCCCGCCTTGTCAACGATTATCACAGAA 897 |||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| Sbjct 840 TTCATTGAAACCTTGAGGGAGAGAATGTTTAAACCCGCCTTGTCAACGATTATTACAGAC 899 Query 898 AATTCAAAGGTTGCACTTGTAGCACCATCAGATCCTGTTAGTGTTGCTGCGAAACGGATG 957 ||||| ||||||||||||||||||||||||||||||||| |||||||||||| ||||| Sbjct 900 AATTCGAAGGTTGCACTTGTAGCACCATCAGATCCTGTTTCAGTTGCTGCGAAAAGGATG 959 Query 958 CGAGATTTGCGGGTTAACTCTGTTATCATTTCCATGGGGAACAAGATCCA-TGGAATCTT 1016 | |||||||||||||||||||| |||||||||| ||||||||| || || ||||||||| Sbjct 960 AGGGATTTGCGGGTTAACTCTGTAATCATTTCCACGGGGAACAAAAT-CAGTGGAATCTT 1018 Query 1017 GACTTCAAAGGACATTCTGATGCGAGTGGTGGCACAAAATTTACCTCCTGAATTGACTCT 1076 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 1019 GACTTCAAAGGACATTCTGATGCGAGTGGTGGCACAAAATTTATCTCCTGAATTGACTCT 1078 Query 1077 TGTTGAGAAGGTAATGACACCGAATCCTGAATGTGCATCGCTAGAGACAACGATTCTGGA 1136 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1079 TGTCGAGAAGGTAATGACACCGAATCCTGAATGTGCATCGCTAGAGACAACGATTCTGGA 1138 Query 1137 TGCGTTGCATATAATGCATGATGGGAAGTTTCTACATCTTCCAATTATAGATAAAGACGG 1196 ||||||||||| |||||||||||| |||||||||||||||||||||||||||||||| || Sbjct 1139 TGCGTTGCATACAATGCATGATGGAAAGTTTCTACATCTTCCAATTATAGATAAAGATGG 1198 Query 1197 ATCAGCTGCAGCTTGTGTAGACGTTCTTCAGATTACTCACGCAGCTATTTCAATGGTCGA 1256 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 1199 ATCAGCTGCAGCTTGTGTAGACGTTCTTCAGATTACTCACGCAGCTATTTCAATGGTGGA 1258 Query 1257 GAACAGTTCTGGAGCTGTGAATGATATGGCGAACACGATGATGCAGAAATTCTGGGATTC 1316 |||||||||||||||||| ||||||||||| |||||||||||||||||||| |||||||| Sbjct 1259 GAACAGTTCTGGAGCTGTAAATGATATGGCAAACACGATGATGCAGAAATTTTGGGATTC 1318 Query 1317 AGCTCTTGCGTTAGAGCCACCAGATGATTCTGACACTCAAAGTGAAATGTCGGCAATGAT 1376 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 1319 AGCTCTTGCGTTAGAGCCACCTGATGATTCTGACACTCAAAGTGAAATGTCGGCAATGAT 1378 Query 1377 GCATCATTCAGATATAGGGAAGCTCAGTTCTTACCCATCTCTAGGACTCGGGAATTCATT 1436 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| || Sbjct 1379 GCATCATTCAGATATAGGGAAGCTCAGTTCTTACCCATCTCTAGGACTAGGGAATTCGTT 1438 Query 1437 TTCATTCAAATTCGAAGACCTTAAGGGCCGTGTACATCGGTTTACTTCCGCAGCTGAAAA 1496 ||| |||||||| ||||||||||||||||||||||||||||||||||| | ||||||||| Sbjct 1439 TTCGTTCAAATTTGAAGACCTTAAGGGCCGTGTACATCGGTTTACTTCTGGAGCTGAAAA 1498 Query 1497 CCTCGAAGAGCTGATGGGTATTGTGATGCAAAGAATTGGCAGCGACAACAATGATGTGGA 1556 |||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| Sbjct 1499 CCTCGAAGAGCTGATGGGTATTGTGATGCAAAGAATTGGCAGCGACAATAACAATGTGGA 1558 Query 1557 ACAACGGCCTCAGATTATATATGAGGACGATGAAGGTGATAAGGTATTGATTACATCGGA 1616 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 1559 ACAACGGCCTCAGATTATATATGAGGACGATGAAGGTGATAAGGTTTTGATTACATCGGA 1618 Query 1617 CAGCGATTTGGTTGGTGCTGTTACTCTTGCTAGATCTACAGGACAAAAGGTTTTGAGGCT 1676 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 1619 TAGCGATTTGGTTGGTGCTGTTACTCTTGCTAGGTCTACAGGACAAAAGGTTTTGAGGCT 1678 Query 1677 GCATCTGGACTTCACTGAGTCAACAAGGAGCTTGAGCTCAGAAACCACCCAACTCAAGAA 1736 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1679 GCATCTGGACTTCACTGAGTCAACAAGGAGCTTGAGCTCAGAAACCACCCAACTCAAGAA 1738 Query 1737 AGGGGATTCTAGAGATAAAGGAAGCGGATGGGTTTCATGGCGTGGTGGTGTGGTGGTTAC 1796 ||| |||||| |||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct 1739 AGGTGATTCTCGAGACAGAGGAAGCGGATGGGTTTCATGGCGTGGTGGTGTGGTGGTTAC 1798 Query 1797 AGGAGCTGTTGTCCTAACAAGCATAGCCATAGTTGTTTACTTGAAGCGTTCAAAGATCTG 1856 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 1799 AGGAGCTGTTGTCCTAACAAGCATAGCCATAGTTGTTTACTTGAAGCGTTCAAAGAACTG 1858 Query 1857 ATTTTTGCTGAAGCAAACTGTTTTGGAGGCAGAACAAAA-Ctttttttct-ttg-ttttt 1913 ||||||||||||||||||||||| ||| ||||||||||| || ||||||| || ||||| Sbjct 1859 ATTTTTGCTGAAGCAAACTGTTTGGGATGCAGAACAAAAACTCTTTTTCTCTTAATTTTT 1918 Query 1914 tggtaagtttcatacagtttgtctcttttgtcttttgGGGTTACATGTT 1962 ||||||||||||||||||||||||||| |||||||||||| ||||||| Sbjct 1919 TGGTAAGTTTCATACAGTTTGTCTCTT--GTCTTTTGGGGTCACATGTT 1965 Score = 187 bits (101), Expect = 3e-46 Identities = 128/141 (91%), Gaps = 1/141 (1%) Strand=Plus/Plus Query 1961 TTGTGTCCCAAAGATATTAAATTAAAGGGGAAAAACCCTATTCAGATTAGTCAATTTGAC 2020 |||| |||| | ||||||||||||| ||||||||||| ||||||||||| || ||||||| Sbjct 2000 TTGTTTCCCTATGATATTAAATTAATGGGGAAAAACCTTATTCAGATTACTCTATTTGAC 2059 Query 2021 AGAGTTTATGTAAAACCTCTGAAACCGAGAAAATAAAACCAGG-AATATCATTGCACTAC 2079 ||||||||||||||||||||||||||| ||||||||| | ||| |||||||||||||| | Sbjct 2060 AGAGTTTATGTAAAACCTCTGAAACCGGGAAAATAAATCAAGGGAATATCATTGCACTGC 2119 Query 2080 AGATTCTGGTATTTGATATAA 2100 |||||||||| |||||||||| Sbjct 2120 AGATTCTGGTCTTTGATATAA 2140 > AT2G36500.1 | Symbols: | CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein | chr2:15318028-15320152 FORWARD LENGTH=1845 Length=1845 Score = 970 bits (525), Expect = 0.0 Identities = 1100/1367 (80%), Gaps = 81/1367 (6%) Strand=Plus/Plus Query 357 TTCTAATGGAGAGAGAACAGTGAAGAAGCTTCGGTTATCGAAAGCTCTCACTATTCCTGA 416 |||| |||| ||||||||||| |||||||| |||||||| ||||||||||||||| ||| Sbjct 330 TTCTGATGGCGAGAGAACAGTCAAGAAGCTACGGTTATCCAAAGCTCTCACTATTAATGA 389 Query 417 AGGAACTACTGT-TTTCGATGCTTGTCGAAGGATGGCGGCTCGGCGTGTTGATGCTTG-T 474 ||||| ||||| ||| |||||||||||||||||||| ||| ||||||||||||| | | Sbjct 390 GGGAACCACTGTCTTT-GATGCTTGTCGAAGGATGGCTGCTAGGCGTGTTGATGC-GGTT 447 Query 475 TTGTTGACTGATTCAAGTGCGCTTCTTTCCGGGATTGTTACTGATAAAGATGTTGCTACA 534 ||||| ||||||||||| || ||||||||||| |||||||| || |||||| | || || Sbjct 448 TTGTTAACTGATTCAAGCGCTCTTCTTTCCGGTATTGTTACAGACAAAGATATAGCCACG 507 Query 535 AGAGTGATTGCTGAAGGGTTGAGACCGGATCAAACTTTGGTCTCTAAGGTTATGACTAGG 594 || |||||||| |||||||||||||| || || ||| |||| ||||| || ||||| ||| Sbjct 508 AGGGTGATTGCAGAAGGGTTGAGACCAGAGCATACTCTGGTGTCTAAAGTCATGACAAGG 567 Query 595 AATCCTATTTTTGTCACGTCTGATTC-GTTGGCGC-TTGAGGCTCTTCAGAAGATGGTTC 652 ||||| ||||||||||| |||||||| || || | |||||||||||||||||||||||| Sbjct 568 AATCCCATTTTTGTCACATCTGATTCACTT-GC-CATTGAGGCTCTTCAGAAGATGGTTC 625 Query 653 AAGGGAAA-TTTAGGCACTTGCCTGTTGTAGAGAATGGTGAAGTCATTGCTTTGTTGGAT 711 ||||||| || |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 626 -AGGGAAAGTTCAGGCACTTGCCTGTTGTAGAGAATGGTGAAGTCATTGCTTTGTTGGAT 684 Query 712 ATTACAAAGTGTTTGTATGATGCTATTTCTA-GGATGGAGAAAGCTGCAGAGCAAGGCAG 770 || ||||||||| | ||||||||||| || | ||||||| ||||||||||||||||| || Sbjct 685 ATCACAAAGTGTCTCTATGATGCTATCTC-ACGGATGGAAAAAGCTGCAGAGCAAGGAAG 743 Query 771 TGCTTTAGC-AGCTGCAGTGGAAGGTGTGGAGAAGCAATGGGGAAGCGGATATTCTGCGC 829 ||||||||| | |||||||||||| || || |||||||| ||| | | | ||| Sbjct 744 TGCTTTAGCTA-CTGCAGTGGAAGAAC-GG-----CATTGGGGAAGTGGAAACT-T-CGC 794 Query 830 CCTATGCTTTCATTGAAACCTTGAGGGAGAGAATGTTTAAGCCCGCCTTGTCAACGATTA 889 | | | |||||| || ||||| ||||| ||||| ||||| || |||||||| || | Sbjct 795 --T-T--T--CATTGATACATTGAGAGAGAGGATGTTCAAGCCTGCATTGTCAACTAT-A 846 Query 890 -TCACAGAAAATTC-AAAGGTTGCACTTGTAGCACCATCAGATCCTGT-TAGTGTTGCTG 946 |||| || ||| | |||| ||||||||||| || ||||||||||||| | ||| ||| Sbjct 847 GTCACTGAGAATACCAAAG-TTGCACTTGTATCAGCATCAGATCCTGTCTT-TGTAGCTT 904 Query 947 CGAAACGGATGCGAGATTTGCGGGTTAACTCTGTTATCATTTCCATGGGGAACAAGATCC 1006 | ||| |||||| |||||||||||||||||||| ||||| | | ||||||||||| | Sbjct 905 CCAAAAAGATGCGTGATTTGCGGGTTAACTCTGTGATCATCGCGGTTGGGAACAAGATTC 964 Query 1007 ATGGAATCTTGACTTCAAAGGACATTCTGATGCGAGTGGTGGCACAAAATTTACCTCCTG 1066 |||| || || ||||||||||||||||| ||| |||| || ||||| ||| || |||||| Sbjct 965 ATGGGATTTTAACTTCAAAGGACATTCTCATGAGAGTTGTAGCACAGAATCTATCTCCTG 1024 Query 1067 AATTGACTCTTGTTGAGAAGGTAATGACACCGAATCCTGAATGTGCATCGCTAGAGACAA 1126 | ||||||||||||| ||||||||||| || ||||||||||||||||| ||||||||| Sbjct 1025 AGCTGACTCTTGTTGAAAAGGTAATGACGCCAAATCCTGAATGTGCATCAATAGAGACAA 1084 Query 1127 CGATTCTGGATGCGTTGCATATAATGCATGATGGGAAGTTTCTA-CATCTTCCAATTATA 1185 | || || ||||| |||||||||||||||||||||||||| || ||||| || || | Sbjct 1085 CAATCCTCGATGCATTGCATATAATGCATGATGGGAAGTT-CTTGCATCTGCCGGTTTTC 1143 Query 1186 GATAAAGACGGAT-CAGCTGCAGCTTGTGTAGACGTTCTTCAGATTACTCACGCAGCTAT 1244 ||||||||||||| | || | ||||||| ||||||| || ||||| |||||||||||||| Sbjct 1144 GATAAAGACGGATTC-GCCGTAGCTTGTTTAGACGTGCTGCAGATAACTCACGCAGCTAT 1202 Query 1245 TTCAATGGTCGAGAACA---GTTCTGGAGCTGTGAATGATATGGCGAACACGATGATGCA 1301 |||| ||| ||||||| | || |||||||| || ||||||||||| || |||||||| Sbjct 1203 ATCAACGGTTGAGAACAACAGCTCAGGAGCTGTTAACGATATGGCGAATACAATGATGCA 1262 Query 1302 GAAA-TTCTGGGATTCAGCTCTTGCGTTAGAGCCACCAGATGATT-CTGACACTCAAAGT 1359 ||| |||||||| ||||||||||||||||| ||||| || |||| | || || || || Sbjct 1263 -AAAGTTCTGGGACTCAGCTCTTGCGTTAGAACCACCTGAGGATTAC-GAAACACACAGC 1320 Query 1360 GAAATGTCGGCAATGATGCATCA-TTCAGATATAGGGAAGCTCAGTTCTTACCCATCTCT 1418 || ||||| |||||| || || | |||||| | ||||||| ||| | | ||||| | Sbjct 1321 GATATGTCAGCAATGCTG-ATAAATTCAGA-A--GGGAAGC--AGT-CGTGTCCATCACA 1373 Query 1419 AGGACTCGGGAATTCATTTTCATTCAAATTCGAAGACCTTAA-GGGCCGTGTACATCGGT 1477 |||||| | || || ||| | |||||||||||||| | ||| ||| | ||||| |||| Sbjct 1374 AGGACTTGTGAGCTCGTTTGCTTTCAAATTCGAAGATCGTAAAGGGA-GAGTACAGCGGT 1432 Query 1478 TTA-CTTCCGCAGCTGAAAACCTCGAAGAGCTGATGGGTATTGTGATGCAAAGAAT-TGG 1535 ||| || | | | ||| | | |||||||||||| || |||||||||||||| | || Sbjct 1433 TTAACT-CAACTGGTGAGAGTTTTGAAGAGCTGATGAGTGTTGTGATGCAAAGA-TGTGA 1490 Query 1536 CAGCGACAACAATGATGTGGAACAACGGCCT-CAGATTATATATGAGGACGATGAAGGTG 1594 |||| ||| | || ||||| ||||| || || | || |||||||||| Sbjct 1491 -AGCG--------GAT-T----CA--GGCCTTCAGATAATGTACCAAGATGATGAAGGTG 1534 Query 1595 ATAAGGTATTGATTACATCGG-ACAGCGAT-TTGGTTGGTGCTGTTACTCTTGCTAGATC 1652 |||| || ||||||| | || |||| ||| ||| ||| |||||| ||| ||||||| || Sbjct 1535 ATAAAGTTTTGATTAG-TAGGGACAGTGATCTTG-TTGCTGCTGTAACTTTTGCTAGGTC 1592 Query 1653 TACAGGACAAAAGGTTTTGAGGCTGCATCTGGACTTCACTGAGTCAA 1699 | || |||||||||||| | || ||||| || || || ||| ||| Sbjct 1593 TTTGGGGCAAAAGGTTTTGCGACTACATCTTGATTTTACCGAGACAA 1639 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 104115930330 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5