BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg486152

Length=1723
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT3G57070.1 | Symbols:  | Glutaredoxin family protein | chr3:21...  2529    0.0  
  AT2G41330.1 | Symbols:  | Glutaredoxin family protein | chr2:17...   353    3e-96


> AT3G57070.1 | Symbols:  | Glutaredoxin family protein | chr3:21123924-21125647 
FORWARD LENGTH=1724
Length=1724

 Score = 2529 bits (1369),  Expect = 0.0
 Identities = 1629/1747 (93%), Gaps = 47/1747 (3%)
 Strand=Plus/Plus

Query  1     ATCAAAATCAAATCGAGAACTG-TG--GTGTCCGAAAATCAACATCAACATCG-TTC-TT  55
             |||||||||||||||||||||| ||  |||||||||||||||||||||||||| ||| ||
Sbjct  1     ATCAAAATCAAATCGAGAACTGTTGTTGTGTCCGAAAATCAACATCAACATCGTTTCTTT  60

Query  56    CTGCTGCCATTAAATTTCACCATCTTCCACCTCCAACTGCCCTAGACAGCTATTCTCCAC  115
             || ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct  61    CTTCTGCCATTAAATTTCACCATCTTCCACCTTCAACTGCCCTAGACAGCTATTCTCCAC  120

Query  116   CTTTCTCTTTTCTCTCTCTGTTCTCTATCATTCCCAGAGCaaaaccaaa-aatctcagaa  174
             ||||||||||||||||||||||||||||||||||||||| | ||||||| ||||||||||
Sbjct  121   CTTTCTCTTTTCTCTCTCTGTTCTCTATCATTCCCAGAG-ATAACCAAACAATCTCAGAA  179

Query  175   gaaaccagaaagagcaaagaaact-aaaagtctaaaacctaaaaagTCAAGTGTTTTT-A  232
             |||||||||||||||||||||||| |||| | | |  | |  |||||| ||||||||| |
Sbjct  180   GAAACCAGAAAGAGCAAAGAAACTAAAAACTATTATTCAT-TAAAGTC-AGTGTTTTTAA  237

Query  233   ATTCGATTTCGTAATGGGTTCTTCTGCTTCAAAGACCGCTTCTTCTGTTTCTTCTACTTC  292
             ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||
Sbjct  238   ATTCGATTTCGTAATGGGTTCTTCTGCTTCAAAGACCGCTTCTTCCGTTTCTTCTGCTTC  297

Query  293   TTCCTCATCTGCGTTTTCTCCACCGCCGACCAAATTCAGCTCCGATTCATCATCTTCACC  352
             ||||||||||||||||||||||||||||||||||||||||||||| |  |||||||||||
Sbjct  298   TTCCTCATCTGCGTTTTCTCCACCGCCGACCAAATTCAGCTCCGA-T--TCATCTTCACC  354

Query  353   GGCGGTGCAGAGAGCTTTTTCGTTTCCGACGCCGTTGGTTCACCATCCTCCGGCGAGAAA  412
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  355   GGCGGTGCAGAGAGCTTTTTCGTTTCCGACGCCGTTGGTTCACCATCCTCCGGCGAGAAA  414

Query  413   AGGCGACACTCATCACCTTGTCTCCCTCACATCTACGTCGTACGGTTCTCTTCTCCTCCT  472
             ||||||| ||||||||||||| ||||| |||||||| |||||||||||||||||||||||
Sbjct  415   AGGCGACTCTCATCACCTTGTTTCCCTTACATCTACATCGTACGGTTCTCTTCTCCTCCT  474

Query  473   CGATCTCGATGGATCCAATAACT-C-C-TCCGACCAACAAACGCTGCCTCGTATCTCAAT  529
              ||||||||||||||||| |||| | | ||||||||||||||||||||||||||||||||
Sbjct  475   TGATCTCGATGGATCCAAAAACTCCTCTTCCGACCAACAAACGCTGCCTCGTATCTCAAT  534

Query  530   CTCCGGGAAGAACACACCAGATCCGGTCTCTCCTGACTCCGTCATAAACACGTGGGAGCT  589
             |||||||||||||||||||||||||||||||||||| || ||||||||||| ||||||||
Sbjct  535   CTCCGGGAAGAACACACCAGATCCGGTCTCTCCTGATTCAGTCATAAACACTTGGGAGCT  594

Query  590   TATGGATGGCTTGGACGACGAATTCGAATTCGAAATTCCCAAACCTGGTAAGCGTCTAAA  649
             |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct  595   TATGGATGGCTTGGACGATGAATTCGAATTCGAAATTCCCAAACCGGGTAAGCGTCTAAA  654

Query  650   TTCGGATTTTTGCTCTAAACCCGACCCGAATCGGAATGTGAGTTTAAATGGGTCTGCGTT  709
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct  655   TTCGGATTTTTGCTCTAAACCCGACCCGAATCGGAATGTGAGTTTAAATGGGTCTTCGTT  714

Query  710   GAAATTGGATGAATCTTACGAGATTGTGAGAATCGAAGAAGACGATGGAGATTGGGTTCC  769
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  715   GAAATTGGATGAATCTTACGAGATTGTGAGAATCGAAGAAGACGATGGAGATTGGGTTCC  774

Query  770   TTTGACTTATAAACCTAAGCAACCTTTGTGGAAGCATTTGTCTGAAGAATCATTTCTCTC  829
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  775   TTTGACTTATAAACCTAAGCAACCTTTGTGGAAGCATTTGTCTGAAGAATCATTTCTCTC  834

Query  830   TGATTTAGATCCCAGCATTGTCTCATCTTACAAGAAAGCTTTGTCTTCCAAGCAATTAAG  889
             ||||||||||||||||||||||||||| |||||||||||||||||||| |||| ||||||
Sbjct  835   TGATTTAGATCCCAGCATTGTCTCATCCTACAAGAAAGCTTTGTCTTCTAAGCTATTAAG  894

Query  890   CAATCATAGTAACACTAGAAACCCTCTTAGACCCACAAAATCCCTCTCTTGTAGCCCATC  949
             |||||||||||| ||||||||||||| |||||||||||| || |||||||||||||||||
Sbjct  895   CAATCATAGTAATACTAGAAACCCTCATAGACCCACAAAGTCTCTCTCTTGTAGCCCATC  954

Query  950   ATC----C-ATC--T-T-AATCAGTGAAGAACCAAAATCTGTATCCTCTAGTCAACTGAT  1000
             |||    | |||  | | ||| || |||||||||||||||||||||||||||||| ||||
Sbjct  955   ATCAAATCCATCCATCTTAATAAGCGAAGAACCAAAATCTGTATCCTCTAGTCAATTGAT  1014

Query  1001  TTCATCAC-AGGCCAAACCGAGATTACCAGGGACAGAAGACAAGATTGTGCTCTACTTCA  1059
             |||||||| || ||||||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct  1015  TTCATCACCAG-CCAAACCGAGATTACCAGGAACAGAAGACAAGATTGTACTCTACTTCA  1073

Query  1060  CAACCCTCCGAGGAATTCGAAAGACATACGAGGATTGCTGTTGCGTTAGAGCGATACTGA  1119
             |||||||| |||||||||||||||||||||||||||| |||||||||||||||||| |||
Sbjct  1074  CAACCCTCAGAGGAATTCGAAAGACATACGAGGATTGTTGTTGCGTTAGAGCGATATTGA  1133

Query  1120  GAGG-GCTTCAAGTCACGGTAGACGAACGTGACATCTCTATGGATTCTAAATACAGGAAA  1178
             |||| | |||||||  | ||||||||||||||||||||||||||||| ||||||||||||
Sbjct  1134  GAGGAG-TTCAAGTGTCCGTAGACGAACGTGACATCTCTATGGATTCCAAATACAGGAAA  1192

Query  1179  GAGCTTCAAAGTGTGCTTGTTGCCGCAGAGAAACCGGTTTGTTTGCCTCAGGTGTTTATC  1238
             ||||||||||| |||||||  |||||||||||||||||||||||||||||||||||||||
Sbjct  1193  GAGCTTCAAAGCGTGCTTGGCGCCGCAGAGAAACCGGTTTGTTTGCCTCAGGTGTTTATC  1252

Query  1239  AGAGGAACTCACATTGGTGGCGTGGAGGAGATTATGCAGCTAAACGATGGTGGTGAATTA  1298
             |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct  1253  AGAGGAACTCACATTGGTGGCGTGGAGGAGATTATGCAGCTAAATGATGGTGGTGAATTA  1312

Query  1299  GCAGAGATGTTGAAAGATTTCCCTGCTTGTGAACGCTTGGGGACATGCCGGAGCTGTGGG  1358
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct  1313  GCAGAGATGTTGAAAGATTTCCCTGCTTGTGAACGCTTGGGGACATGCCGGAGCTGTGGT  1372

Query  1359  GATGCAAGGTTTGTGCCTTGTACTAACTGCGACGGAAGCACCAAAGTGTTTGAAGAACAA  1418
             ||||||||||||||||||||||||||||| || || ||||||||||||||||||||||||
Sbjct  1373  GATGCAAGGTTTGTGCCTTGTACTAACTGTGATGGTAGCACCAAAGTGTTTGAAGAACAA  1432

Query  1419  GACGAACGGTTCAAGCGATGTCCTAAATGCAATGAGAATGGATTGGTGCGTTGTCGCGTG  1478
             || |||||||| ||||| |||||||||||||||||||||||||||||||||||||| |||
Sbjct  1433  GATGAACGGTTTAAGCGGTGTCCTAAATGCAATGAGAATGGATTGGTGCGTTGTCGTGTG  1492

Query  1479  TGTTGTCTCTAAGTGATCTGTTTGATCAAAAGCTGTGCGGGTGAAAGGGGAATATAGATT  1538
             |||||||||||||||||| ||||||||||||| |||| | | ||||||||| ||||||||
Sbjct  1493  TGTTGTCTCTAAGTGATCAGTTTGATCAAAAGATGTGTGTGAGAAAGGGGA-TATAGATT  1551

Query  1539  GATTGACTAAACCTGGTATTTGGTTAGTAATGTATATTGAAATAAGTAAGTTGGCTCAAG  1598
             |||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct  1552  GATTGACTAAACATGGTATTTGGTTAGTAATGTATATTCAAATAAGTAAGTTGGCTCAAG  1611

Query  1599  CCTTTTATG-TT-ACTCTCTTATGACTTGTGTTCTTTTGTTCCATTTATGTTCTTGATCT  1656
             ||||||||  || ||||| | |||| |||||||||||||||||||||| | |||||| ||
Sbjct  1612  CCTTTTATTATTTACTCT-T-ATGAGTTGTGTTCTTTTGTTCCATTTACGCTCTTGACCT  1669

Query  1657  TGACCCTTAAACTAAATGATTCTTACTATACTATATTATAAGTACATAAAATGTTAGATG  1716
             |     || ||||||||||||||||||||| |  |  |   |||||| ||||| ||||||
Sbjct  1670  T-----TTGAACTAAATGATTCTTACTATA-TG-A--A---GTACATCAAATGGTAGATG  1717

Query  1717  ATGATTG  1723
             |||||||
Sbjct  1718  ATGATTG  1724


> AT2G41330.1 | Symbols:  | Glutaredoxin family protein | chr2:17226948-17228378 
FORWARD LENGTH=1431
Length=1431

 Score =  353 bits (191),  Expect = 3e-96
 Identities = 371/456 (81%), Gaps = 19/456 (4%)
 Strand=Plus/Plus

Query  1039  ACAAGATTGT-GCTCTACTTCACAACCCTCCGAGGAATTCGAAAGACATACGAGGATTGC  1097
             ||||||| || | | |||||||| | |||| |||||||||||||||| || || ||||| 
Sbjct  880   ACAAGATAGTAG-TATACTTCACTAGCCTCAGAGGAATTCGAAAGACGTATGAAGATTGT  938

Query  1098  TGTTGCGTTAGAGCGATACTGAGAGGGCTTCAAGTCACGGTAGACGAACGTGACATCTCT  1157
             |||||||||||||||||| |||||||| |||| ||  ||||||| || ||||||||||| 
Sbjct  939   TGTTGCGTTAGAGCGATATTGAGAGGGTTTCAGGTTGCGGTAGAGGAGCGTGACATCTCA  998

Query  1158  ATGGATTCTAAATACAGGAAAGAGCTTCA-AAGTGTGCTTGTTGCCGCAGAGAAACCGGT  1216
             ||||| || |||||||||||||||||||| || ||  || |  | || ||||||||||||
Sbjct  999   ATGGACTCCAAATACAGGAAAGAGCTTCAGAA-TGCACTCG--G-CGAAGAGAAACCGGT  1054

Query  1217  TTGTTTGCCTCAGGTGTTTATCAGAGGAACTCA-CATTGGTGGCGTGGAGGAGATTATGC  1275
             ||||||||||||||||||||| |||||   ||  |||||||||  | |||||||| | | 
Sbjct  1055  TTGTTTGCCTCAGGTGTTTATAAGAGGCG-TCCGCATTGGTGGAATTGAGGAGATCAAGA  1113

Query  1276  -AGCTAAACGATGGTGGTGAATTAGCAGAGATGTTGAAAGATTTCCCTGCTTGTGAA-CG  1333
              | || |||||||| |||||| | ||||||||||| |||||||| |||||||| ||| | 
Sbjct  1114  TA-CTCAACGATGGAGGTGAACTGGCAGAGATGTTAAAAGATTTTCCTGCTTGCGAATC-  1171

Query  1334  C-TTGGGGACATGCCGG-AGCTGTGGGGATGCAAGGTTTGTGCCTTGTACTAACTGCGAC  1391
             | |||| | | ||| |  ||||| || ||||||||||||||||| |||||||| || | |
Sbjct  1172  CATTGGAGCC-TGC-GATAGCTGCGGAGATGCAAGGTTTGTGCCGTGTACTAATTGTGGC  1229

Query  1392  GGAAGCACCAAAGTGTTTGAAGAACAAGACGAACGGTTCAAGCGATGTCC-TAAATGCAA  1450
             || || || ||||||||||| |||||||| ||  |||| ||| |||| |  |  ||||||
Sbjct  1230  GGTAGTACTAAAGTGTTTGAGGAACAAGAAGATGGGTTTAAGAGATG-CAATGGATGCAA  1288

Query  1451  TGAGAATGGATTGGTGCGTTGTCGCGTGTGTTGTCT  1486
             ||||||||||||||| ||||||  |  |||||||||
Sbjct  1289  TGAGAATGGATTGGTACGTTGTAACAAGTGTTGTCT  1324


 Score =  132 bits (71),  Expect = 1e-29
 Identities = 98/111 (88%), Gaps = 2/111 (2%)
 Strand=Plus/Plus

Query  771  TTGACTTATAAACCTAAGCAACCTTTGTGGAAGCATTTGTCTGAAGAATCATTTCTCTCT  830
            ||| ||| |||||||||||||||| ||||||| ||| |||||||||||||||||||||||
Sbjct  621  TTGCCTTTTAAACCTAAGCAACCTCTGTGGAAACATATGTCTGAAGAATCATTTCTCTCT  680

Query  831  GATTTAGATCCCAGCATTGTCTCATCTTACAAGAA-AGCTTTGTCTTCCAA  880
            ||||||||||| | |||| ||||||||||||| || |||  |||| |||||
Sbjct  681  GATTTAGATCCTAACATTATCTCATCTTACAA-AAGAGCACTGTCCTCCAA  730



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 85190324865


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5