BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg486239 Length=896 Score E Sequences producing significant alignments: (Bits) Value AT3G57870.1 | Symbols: AHUS5, EMB1637, SCE1, SCE1A, ATSCE1 | su... 1435 0.0 AT5G02244.1 | Symbols: | Pseudogene of AT3G57870; AHUS5 (SUMO ... 422 4e-117 > AT3G57870.1 | Symbols: AHUS5, EMB1637, SCE1, SCE1A, ATSCE1 | sumo conjugation enzyme 1 | chr3:21428496-21430200 REVERSE LENGTH=908 Length=908 Score = 1435 bits (777), Expect = 0.0 Identities = 860/898 (96%), Gaps = 14/898 (2%) Strand=Plus/Plus Query 1 GATagagattggagagcgagcgagacaaatcagaagagagagagagagattgagatattg 60 ||||||||||||||||||||||||||||||| ||| ||||||||||| |||||||| Sbjct 1 GATAGAGATTGGAGAGCGAGCGAGACAAATC-----AGA-AGAGAGAGATTTAGATATTG 54 Query 61 tagagtgagattct-aa-agagagagacagagagatATGGCTAGTGGAATCGCTCGTGGT 118 |||||||||||||| || ||||||||| |||||||||||||||||||||||||||||||| Sbjct 55 TAGAGTGAGATTCTAAAGAGAGAGAGAGAGAGAGATATGGCTAGTGGAATCGCTCGTGGT 114 Query 119 CGTTTAGCTGAAGAGAGGAAATCGTGGAGGAAGAATCATCCTCATGGTTTTGTGGCAAAG 178 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 115 CGTTTAGCTGAAGAGAGGAAATCGTGGAGGAAGAATCATCCTCATGGTTTTGTGGCAAAG 174 Query 179 CCGGAGACGGGGCAGGATGGAACTGTGAATCTAATGGTGTGGCATTGCACTATACCTGGT 238 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 175 CCGGAGACGGGGCAGGATGGAACTGTGAATCTAATGGTGTGGCATTGCACTATACCTGGT 234 Query 239 AAAGCTGGGACTGATTGGGAAGGTGGATTCTTCCCATTAACGATGCACTTCAGTGAGGAT 298 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 235 AAAGCTGGGACTGATTGGGAAGGTGGATTCTTTCCATTAACGATGCACTTCAGTGAGGAT 294 Query 299 TATCCGAGCAAACCTCCGAAATGCAAATTCCCACAAGGGTTTTTCCACCCTAATGTCTAT 358 ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| Sbjct 295 TATCCGAGCAAACCTCCGAAATGTAAATTTCCACAAGGGTTTTTCCACCCTAATGTCTAT 354 Query 359 CCATCTGGAACTGTCTGTCTCTCCATCCTTAACGAGGATTACGGGTGGAGACCAGCCATC 418 ||||||||||||||||||||||| ||||||||||||||||| || ||||||||||||||| Sbjct 355 CCATCTGGAACTGTCTGTCTCTCTATCCTTAACGAGGATTATGGATGGAGACCAGCCATC 414 Query 419 ACCGTGAAGCAGATTCTTGTTGGTATTCAGGATTTACTTGACACACCTAATCCCGCTGAC 478 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 415 ACCGTGAAGCAGATTCTTGTTGGTATTCAGGATTTACTTGACACACCGAATCCCGCTGAC 474 Query 479 CCTGCACAGACTGATGGTTATCATCTTTTCTGTCAGGATCCAGTTGAGTACAAGAAAAGG 538 ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 475 CCTGCACAGACAGATGGTTATCATCTCTTCTGTCAGGATCCAGTTGAGTACAAGAAAAGG 534 Query 539 GTGAAGCTGCAGTCCAAGCAGTATCCTGCTCTTGTCTAAAACCTCAAAAGAGAGAACGCA 598 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 535 GTGAAGCTGCAGTCCAAGCAGTATCCTGCTCTTGTCTAAAACCTCAAAAAAGAGAACGCA 594 Query 599 CCAAAACTGATGACATGCTCTGAATATTTTCTCGTCTTGTGTCATTGTGTTTAGATGTCA 658 ||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| Sbjct 595 CCAAAACTGATGACAAGCTCTGAATATTTTCTCGTCTTGTGTCATTATGTTTAGATGTCA 654 Query 659 TTGGGTGATTGAAAACTCCTCATTTTGGCACCTTAAGACACTGGAATCTATTTATTTGCG 718 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 655 TTGGGTGATTGAAAACTCCTCATTTTGGCACCTTAAGACACTGGAATCTATTTATTTTCG 714 Query 719 AAGAAACTCAGTTCtttttttCTCTATTTAACTGTTAATATTCTTGGTACTGATTCAGTT 778 || ||| | | ||| ||| ||||||||||||||||||||||||||||||||||||||| Sbjct 715 AAAAAAAAC--T-CTTCTTT-CTCTATTTAACTGTTAATATTCTTGGTACTGATTCAGTT 770 Query 779 GGTGTTGCTTCTATATAATACATAACTATGTTCTCTGGTCGTTCATGAGTGTTGTCCAAA 838 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 771 GGTGTTGCTTCTATATAATACATAATTATGTTCTCTGGTCGTTCATGAGTGTTGTCCAAA 830 Query 839 TTCTACCAAGTTAAGTATATGAAGTCTTCATTCCAAATAGTAACGAATCTTAGTTGTG 896 |||||| |||| || ||||||||||||||||||| | |||||||||||||||||||| Sbjct 831 TTCTACTAAGTGAA--ATATGAAGTCTTCATTCCATAGAGTAACGAATCTTAGTTGTG 886 > AT5G02244.1 | Symbols: | Pseudogene of AT3G57870; AHUS5 (SUMO CONJUGATION ENZYME 1); ubiquitin-protein ligase | chr5:453814-454294 FORWARD LENGTH=324 Length=324 Score = 422 bits (228), Expect = 4e-117 Identities = 306/339 (90%), Gaps = 24/339 (7%) Strand=Plus/Plus Query 248 ACTGATTGGGAAGGTGGATTCTTCCCATTAACGATGCACTTCAGTGAGGATTATCCGAGC 307 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 1 ACTGATTGGGAAGGTGGATTCTTTCCATTAACGATGCACTTCAGTGAGGATTATCCGAGC 60 Query 308 AAACCTCCGAAATGCAAATTCCCACAAGGGTTTTTCCACCCTAATGTCTATCCATCTGGA 367 |||||||||||||||||||| | ||||||||||||||||||||||||| Sbjct 61 AAACCTCCGAAATGCAAATT----C----------CCACCCTAATGTCTATCCATCTGGA 106 Query 368 ACTGTCTGTCTCTCCATCCTTAACGAGGATTACGGGTGGAGACCAGCCATCACCGTGAAG 427 |||||||||||||| |||||||||||||||||| | | |||||||||| ||||||||| Sbjct 107 ACTGTCTGTCTCTCTATCCTTAACGAGGATTAC-GTTATTGACCAGCCATTACCGTGAAG 165 Query 428 CAGATTCTTGTTGGTATTCAGGATTTACTTGACACACCTAATCCCGCTGACCCTGCACAG 487 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 166 CAGATTCTTGTTGGTATTCAGGATTTACTTGACACACCTAATCCCGCTGACCCTGCACAG 225 Query 488 ACTGATGGTTATCATCTTTTCTGTCAG-----G-AT---CCAGTTGAGTACAAGAAAAGG 538 || ||||||||||||| |||||||||| | || ||||||||||||||||||||| Sbjct 226 ACCGATGGTTATCATCATTTCTGTCAGATTTTGCATGATCCAGTTGAGTACAAGAAAAGG 285 Query 539 GTGAAGCTGCAGTCCAAGCAGTATCCTGCTCTTGTCTAA 577 ||||||||||||||||||||||||||||||||||||||| Sbjct 286 GTGAAGCTGCAGTCCAAGCAGTATCCTGCTCTTGTCTAA 324 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 43753942037 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5