BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg486463
Length=2031
Score E
Sequences producing significant alignments: (Bits) Value
AT3G59970.3 | Symbols: MTHFR1 | methylenetetrahydrofolate reduc... 3295 0.0
AT2G44160.1 | Symbols: MTHFR2 | methylenetetrahydrofolate reduc... 1853 0.0
AT3G59980.1 | Symbols: | Nucleic acid-binding, OB-fold-like pr... 388 8e-107
> AT3G59970.3 | Symbols: MTHFR1 | methylenetetrahydrofolate reductase
1 | chr3:22151195-22154483 FORWARD LENGTH=2047
Length=2047
Score = 3295 bits (1784), Expect = 0.0
Identities = 1964/2049 (96%), Gaps = 20/2049 (1%)
Strand=Plus/Plus
Query 1 GAGTGAGTAAAGGAACCAGAGAGACCAAACTTGCCTCT------CCA----C-C-ACC-A 47
||||||||||| ||||||||||||||||||||||||| ||| | | ||| |
Sbjct 1 GAGTGAGTAAACAAACCAGAGAGACCAAACTTGCCTCTCCACCACCACTTCCTCTACCTA 60
Query 48 -CT--TTCCGAATCTGGATTTGGATTTGGATCTCATTTCGATTCGACAATGAAGGTGGTT 104
|| ||||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct 61 TCTAATTCCGAATCTGGATTTGGATTTGGATCTCATTTCGATTCAACGATGAAGGTGGTT 120
Query 105 GATAAGATCAAATCCGTGACGGAGCAAGGCCAAACAGCTTTCTCCTTCGAGTTTTTCCCA 164
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 121 GATAAGATCAAATCCGTGACGGAGCAAGGCCAAACAGCTTTCTCCTTCGAGTTTTTCCCA 180
Query 165 CCCAAGACGGAGGATGGCGTCGAGAATCTCTTTGAACGAATGGATCGATTGGTCTCTTAT 224
|| ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 181 CCGAAGACAGAAGATGGCGTCGAGAATCTCTTTGAACGAATGGATCGATTGGTCTCTTAT 240
Query 225 GGACCTACCTTCTGCGATATCACTTGGGGTGCCGGAGGATCCACCGCCGATCTCACTCTC 284
|||||||||||||||||||||||||||||||| || |||||||| || ||||||||||||
Sbjct 241 GGACCTACCTTCTGCGATATCACTTGGGGTGCTGGTGGATCCACAGCTGATCTCACTCTC 300
Query 285 GAGATCGCTTCTAGGATGCAGAATGTTATCTGCGTCGAGACTATGATGCATCTCACTTGT 344
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 301 GAGATTGCTTCTAGGATGCAGAATGTTATCTGCGTCGAGACTATGATGCATCTCACTTGT 360
Query 345 ACCAACATGCCGATTGAGAAGATTGACCACGCGCTTGAGACGATTAGATCTAATGGAATT 404
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 361 ACCAACATGCCGATTGAGAAGATTGATCACGCGCTTGAGACGATTAGATCTAATGGAATT 420
Query 405 CAGAATGTGCTTGCGCTTAGAGGAGATCCGCCTCATGGACAGGATAAGTTCGTTCAGGTT 464
|||||||||||||| |||||||||||||| ||||||||||| |||||||| |||||||||
Sbjct 421 CAGAATGTGCTTGCTCTTAGAGGAGATCCTCCTCATGGACAAGATAAGTTTGTTCAGGTT 480
Query 465 GAAGGAGGATTTGCTTGTGCTTTGGATCTGGTGAATCACATTCGAAGCAAGTATGGTGAT 524
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 481 GAAGGAGGATTTGCTTGTGCTTTGGATCTGGTGAATCACATTCGTAGCAAGTATGGTGAT 540
Query 525 TACTTTGGAATCACTGTTGCTGGTTATCCTGAGGCTCATCCTGATGTTATTGAAGCTGAT 584
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 541 TACTTTGGAATCACTGTTGCTGGTTATCCTGAGGCTCATCCGGATGTTATTGAAGCTGAT 600
Query 585 GGACTTGCTACTCCTGAATCTTATCAGAGTGATCTTGCTTACCTGAAGAAAAAGGTTGAT 644
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 601 GGACTTGCTACTCCTGAATCTTATCAGAGTGATCTTGCTTACTTGAAGAAAAAGGTTGAT 660
Query 645 GCTGGAGCAGATTTGATTGTGACTCAGCTTTTCTATGATACTGATATATTCCTCAAATTT 704
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 661 GCTGGAGCAGATTTGATTGTGACTCAGCTTTTCTATGATACTGATATATTCCTCAAGTTT 720
Query 705 GTGAATGATTGTCGCCAAATCGGGATAAATTGTCCCATTGTTCCTGGAATTATGCCCATT 764
|||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| |||
Sbjct 721 GTGAATGATTGTCGGCAAATCGGGATTAATTGTCCCATTGTTCCTGGAATTATGCCTATT 780
Query 765 TCCAACTACAAGGGGTTCTTGCGTATGGCTGGTTTCTGCAAGACCAAGATACCTGCTGAG 824
|||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct 781 TCCAACTACAAGGGGTTCTTGCGTATGGCTGGTTTCTGTAAGACCAAGATACCCGCTGAG 840
Query 825 CTCACTGCTGCCTTAGAGCCTATTAAGGATAATGACGAGGCTGTCAAAGCCTATGGTATT 884
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct 841 CTCACTGCTGCCTTAGAGCCTATTAAGGATAATGACGAGGCTGTTAAAGCCTATGGAATT 900
Query 885 CACTTTGCAACAGAAATGTGCAAAAAGATTTTGGCCCATGGAATCACTACCCTTCATATT 944
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
Sbjct 901 CACTTTGCAACAGAAATGTGCAAAAAGATTTTGGCCCATGGAATCACTTCCCTTCATCTC 960
Query 945 TACACATTGAACGTGGACAAATCAGCTATTGGGATATTAATGAACCTTGGTTTGATTGAT 1004
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 961 TACACATTGAACGTGGACAAATCAGCTATTGGGATATTAATGAACCTTGGTCTGATTGAT 1020
Query 1005 GAGTCAAAAATTTCTCGTTCTCTACCTTGGAGACGCCCTGCAAATGTTTTCCGTACTAAG 1064
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1021 GAGTCAAAAATTTCTCGTTCTCTACCTTGGAGACGCCCTGCAAATGTTTTCCGTACTAAG 1080
Query 1065 GAAGATGTTCGCCCAATTTTCTGGGCAAATCGTCCAAAGAGCTATATATCTAGAACAAAG 1124
||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||
Sbjct 1081 GAAGATGTTCGCCCAATTTTCTGGGCAAACCGTCCAAAGAGCTACATATCTAGAACAAAG 1140
Query 1125 GGCTGGAATGACTTCCCACATGGACGTTGGGGTGATACACGCAGTGCATCATATAGTACA 1184
|||||||||||||||||||||||||||||||||||| ||| ||||||| |||| ||||||
Sbjct 1141 GGCTGGAATGACTTCCCACATGGACGTTGGGGTGATTCACACAGTGCAGCATACAGTACA 1200
Query 1185 CTTTCAGATTATCAGTTCACACGCCCAAAAGCACGTGACAAGAAGCTTCAGCAAGAATGG 1244
||||| ||||||||||| | |||||||||| ||||||||||||||||||||||||||||
Sbjct 1201 CTTTCGGATTATCAGTTTGCGCGCCCAAAAGGACGTGACAAGAAGCTTCAGCAAGAATGG 1260
Query 1245 GTTGTCCCATTGAAAAGCATTGAAGATGTTCAAGAGAAATTCAAAGAGCTCTGCATTGGA 1304
|| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1261 GTCGTCCCACTGAAAAGCATTGAAGATGTTCAAGAGAAATTCAAAGAGCTCTGCATTGGA 1320
Query 1305 AACTTAAAAAGCAGTCCATGGTCTGAATTAGATGGACTCCAGCCAGAGACAAAGATCATA 1364
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1321 AACTTAAAAAGCAGCCCATGGTCTGAATTAGATGGACTCCAGCCAGAGACAAAGATCATA 1380
Query 1365 AACGAGCAACTCGGGAAAATCAACTCCAATGGTTTCCTGACCATCAATAGCCAACCATCA 1424
|| ||||||||||| |||||||||||||| |||||||||||||| |||||||||||||||
Sbjct 1381 AATGAGCAACTCGGAAAAATCAACTCCAACGGTTTCCTGACCATTAATAGCCAACCATCA 1440
Query 1425 GTCAATGCAGCTAAATCCGATTCCCCAGCTATTGGATGGGGTGGTCCTGGTGGTTACGTC 1484
||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1441 GTCAATGCAGCCAAATCCGATTCTCCAGCTATTGGATGGGGTGGTCCTGGTGGTTACGTC 1500
Query 1485 TACCAGAAAGCTTATCTGGAGTTCTTCTGTTCAAAGGATAAGTTAGACACACTTGTGGAG 1544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1501 TACCAGAAAGCTTATCTGGAGTTCTTCTGTTCAAAGGATAAGTTAGACACACTTGTGGAG 1560
Query 1545 AAATCCAAAGCTTTTCC-TCTTATCACCTACATGGCCGTGAACAAAGCAGAGAATTGGGT 1603
||||||||||||||||| || ||||||||||||||||||||||||| |||||||||||||
Sbjct 1561 AAATCCAAAGCTTTTCCTTC-TATCACCTACATGGCCGTGAACAAATCAGAGAATTGGGT 1619
Query 1604 ATCAAACACCGATGAGTGCGATGTGAATGCAGTTACTTGGGGAGTGTTCCCAGCTAAGGA 1663
||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1620 ATCAAACACCGGTGAGTCCGATGTGAATGCAGTTACTTGGGGAGTGTTCCCAGCTAAGGA 1679
Query 1664 GGTTATTCAACCGACGATCGTGGATCCAGCCAGTTTCAAAGTCTGGAAAGACGAAGCGTT 1723
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1680 GGTTATTCAACCGACGATCGTGGATCCAGCCAGTTTCAAAGTCTGGAAAGACGAAGCGTT 1739
Query 1724 TGAGATTTGGTCAAGAAGCTGGGCTAATTTGTACCCAGAAGATGACCCTTCTAGAAAATT 1783
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct 1740 TGAGATTTGGTCAAGAAGCTGGGCTAACTTGTACCCAGAAGATGACCCTTCTAGAAAGTT 1799
Query 1784 GCTCGAGGAGGTGAAGAACAGCTACTATTTGGTAAGCTTAGTGGACAACGATTACATCAA 1843
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1800 GCTCGAGGAGGTGAAGAACAGCTACTATTTGGTAAGCTTAGTGGACAACAATTACATCAA 1859
Query 1844 TGGTGATATATT-TGCTGTCTTTGCTTGATCTCCGAGAAAACCAACGGCAAAGAGGAAAC 1902
||||||||| || | ||||||||||||||||||||||||||||| |||| ||||||||||
Sbjct 1860 TGGTGATATCTTCT-CTGTCTTTGCTTGATCTCCGAGAAAACCACCGGCGAAGAGGAAAC 1918
Query 1903 ATTCGATTTCGCGATTTGTTTTGTACCTTTTAAAGTTACTTTTGATTCGTAATAACCTTA 1962
||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1919 ATTCGATTTCGAGATTTGTTTTGTACCTTTTAAAGTTATTTTTGATTCGTAATAACCTTA 1978
Query 1963 TTTTGATGAATCAACAAAAACATCAGTTTGATTGCAATGaaaaaaaTCGCCTTAGCGGTC 2022
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1979 CTTTGATGAATCAACAAAAACATCAGTTTGATTGCAATGAAAAAAATCGCCTTAGCGGTT 2038
Query 2023 TGTTCTTTC 2031
|||||||||
Sbjct 2039 TGTTCTTTC 2047
> AT2G44160.1 | Symbols: MTHFR2 | methylenetetrahydrofolate reductase
2 | chr2:18262210-18265346 FORWARD LENGTH=2037
Length=2037
Score = 1853 bits (1003), Expect = 0.0
Identities = 1563/1833 (85%), Gaps = 40/1833 (2%)
Strand=Plus/Plus
Query 75 TCT-CATTTCGATTCGACA-ATGAAGGTGGTTGATAAGATCAAATCCGTGA-CGGAGC-A 130
||| |||||||| || | ||||||||| | ||||||||| | | | | | | || | |
Sbjct 73 TCTCCATTTCGAAAAGA-AGATGAAGGTGATAGATAAGATCCAGT-CATTAGCCGA-CGA 129
Query 131 AGGCCAAACAGC-TTTCTCCTTCGAGTTTTTCCCACCCAAGACGGAGGATGGCGTCGAGA 189
|||| ||||||| ||| |||||||| || |||||||| ||||| || ||||| ||||| |
Sbjct 130 AGGCAAAACAGCGTTT-TCCTTCGAATTCTTCCCACCAAAGACAGAAGATGGAGTCGACA 188
Query 190 ATCTCTTTGA-ACGAATGGATCGATTGGTCT-CTTATGGACCTACCTTCTGCGATATCAC 247
|||||||||| | ||||||||||| |||| | ||||||| || || || |||||||||||
Sbjct 189 ATCTCTTTGAGA-GAATGGATCGAATGGT-TGCTTATGGTCCAACGTTTTGCGATATCAC 246
Query 248 TTGGGGTGCCGGAGGATCCACCGCCGATCTCACTCTCGAGATCGCTTCTAGGATGCAGAA 307
|||||| || || ||||| ||||| ||||| || || || || ||||| |||||||| ||
Sbjct 247 TTGGGGAGCTGGTGGATCTACCGCAGATCTAACGCTTGATATAGCTTCGAGGATGCAAAA 306
Query 308 TGTTATCTGCGTCGAGACTATGATGCATCTCACTTGTACCAACATGCC-GATTGAGAAGA 366
||| | || || |||| |||||||||||| || ||||| |||||||| | |||||||||
Sbjct 307 CGTTGTTTGTGTTGAGAGTATGATGCATCTTACGTGTACTAACATGCCTG-TTGAGAAGA 365
Query 367 TTGACCACGCGCTTGAGACGATTAGATCTAATGGAATTCAGAATGTGCTTGCGCTTAGAG 426
|||| || || |||||||| |||||||||||||| ||||||||||||||||| |||||||
Sbjct 366 TTGATCATGCTCTTGAGACTATTAGATCTAATGGGATTCAGAATGTGCTTGCTCTTAGAG 425
Query 427 GAGATCCGCCTCATGGACAGGATAAGTTCGTTCAGGTTGAAGGAGGATTTGCTTGTGCTT 486
| ||||| |||||||| || |||||||| |||||||||||||| || |||| ||||||||
Sbjct 426 GTGATCCTCCTCATGGTCAAGATAAGTTTGTTCAGGTTGAAGGTGGTTTTGATTGTGCTT 485
Query 487 TGGATCTGGTGAATCACATTCGAAGCAAGTATGGTGATTACTTTGGAATCACTGTTGCTG 546
||||||| || ||||||||||| ||||||||||||||||||||||| |||||||| ||||
Sbjct 486 TGGATCTTGTTAATCACATTCGTAGCAAGTATGGTGATTACTTTGGTATCACTGTCGCTG 545
Query 547 GTTATCCTGAGGCTCATCCTGATGTTATTGAAGCTG-ATGGACTTGC-TACTCCTGAATC 604
||||||||||||| |||||||||||||||| | | |||| ||||| | || |||| |
Sbjct 546 GTTATCCTGAGGCGCATCCTGATGTTATTGGTG-AGAATGGTCTTGCGT-CTAATGAAGC 603
Query 605 TTATCAGAGTGATCTTGCTTACCTGAAGAAAAAGGTTGATGCTGGAGCAGATTTGATTGT 664
||||||||||||||||| || |||||||||||| ||||||||||||| ||| |||||||
Sbjct 604 TTATCAGAGTGATCTTGAGTATCTGAAGAAAAAGATTGATGCTGGAGCTGATCTGATTGT 663
Query 665 GACTCAGCTTTTCTATGATACTGATATATTCCTCAAATTTGTGAATGATTGTCGCCAAAT 724
||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||
Sbjct 664 TACTCAGCTTTTCTATGATACTGATATATTCCTCAAGTTTGTGAATGATTGTCGGCAAAT 723
Query 725 CGGGATAAATTGTCCCATTGTTCCTGGAATTATGCCCATTTCCAACTACAAG-GGGTTCT 783
||||| | ||||||||||||||||||||||||||| ||| |||||| || || || |
Sbjct 724 TGGGATTAGTTGTCCCATTGTTCCTGGAATTATGCCTATTAATAACTAC-AGAGGCTTTT 782
Query 784 TGCGTATGGCTGGTTTCTGCAAGACCAAGATACCTGCTGAGCTCACT-GCTGCCTTAGAG 842
|||||||| |||||||||||||||| |||||||| | |||| | | | |||||||| |||
Sbjct 783 TGCGTATGACTGGTTTCTGCAAGACTAAGATACCAGTTGAGGTGA-TGGCTGCCTTGGAG 841
Query 843 CCTATTAAGGATAATGACGAGGCTGTCAAAGCCTATGGTATTCACTTTGCAACAGAAATG 902
||||| |||||||| || || ||||| |||||||||||||||||| ||| |||||| |||
Sbjct 842 CCTATCAAGGATAACGAAGAAGCTGTGAAAGCCTATGGTATTCACCTTGGAACAGAGATG 901
Query 903 TGCAAAAAGATTTTGGCCCATGGAATC-ACTACCCTTCATATTTACACATTGAACGTGGA 961
|| |||||||| ||||| |||||| || | | | |||||| | |||||||||||| ||||
Sbjct 902 TGTAAAAAGATGTTGGCTCATGGAGTCAAGT-CTCTTCATCTCTACACATTGAACATGGA 960
Query 962 CAAATCAGCTATTGGGATATTAATGAACCTTGGTTTGATTGATGAGTCAAAAATTTCTCG 1021
||||| ||| ||| ||||| ||||| |||||| ||||||||||||| |||||||||||
Sbjct 961 GAAATCTGCTCTTGCAATATTGATGAATCTTGGTATGATTGATGAGTCCAAAATTTCTCG 1020
Query 1022 TTCTCTACCTTGGAGACGCCCTGCAAATGTTTTCCGTACTAAGGAAGATGTTCGCCCAAT 1081
|||| |||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct 1021 TTCTTTACCCTGGAGACGCCCTGCAAATGTTTTCCGTACTAAGGAAGATGTGCGCCCCAT 1080
Query 1082 TTTCTGGGCAAATCGTCCAAAGAGCTATATATCTAGAACAAAGGGCTGG-AATGACTTCC 1140
|||||||||||| |||||||||||||| || |||||||| ||||||||| || || ||||
Sbjct 1081 TTTCTGGGCAAACCGTCCAAAGAGCTACATTTCTAGAACCAAGGGCTGGGAA-GATTTCC 1139
Query 1141 CACATGGACGTTGGGGTGATACACGCAGTGCATCATATAGTACACTTTCAGATTATCAGT 1200
|||| || || ||||||||| |||||||||| |||||| || |||| || ||| ||||||
Sbjct 1140 CACAAGGCCGGTGGGGTGATTCACGCAGTGCTTCATATGGTGCACTCTCGGATCATCAGT 1199
Query 1201 TCACACGCCCAAAAGCACGTGACAAGAAGCTTCAGCAAGAATGGGTTGTCCCATTGAAAA 1260
|| |||| || ||||||||||||||||||||| |||||||||||||||||| ||||||
Sbjct 1200 TCTCACGTCCGCGAGCACGTGACAAGAAGCTTCAACAAGAATGGGTTGTCCCACTGAAAA 1259
Query 1261 GCATTGAAGATGTTCAAGAGAAATTCAAAGAGCTCTGCATTGGAAAC-TTAAAAAGCAGT 1319
| |||||||| |||| ||||||||||| ||||||||| |||||||| |||||| |||||
Sbjct 1260 GTGTTGAAGATATTCAGGAGAAATTCAAGGAGCTCTGCCTTGGAAACCTTAAAA-GCAGT 1318
Query 1320 CCATGGTCTGAATTAGATGGACTCCAGCCAGAGACAAAGATCATAAACGAGCAACTCGGG 1379
|| |||||||||||||||||||||||||||||||||| ||| |||||||||||||| |
Sbjct 1319 CCCTGGTCTGAATTAGATGGACTCCAGCCAGAGACAAGGATAATAAACGAGCAACT-GAT 1377
Query 1380 AAAA-TCAACTCCAATGGTTTCCTGACCATCAATAGCCAACCATCAGTCAATGCAGCTAA 1438
|||| |||||||||| || ||| |||||||||||||||||||||||||||| || | |
Sbjct 1378 AAAAGTCAACTCCAAAGGCTTCTTGACCATCAATAGCCAACCATCAGTCAACGCCGAGAG 1437
Query 1439 ATCCGATTCCCCAGCTATTGGATGGGGTGGTCCTGGTGGTTACGTCTACCAGAAAG-CTT 1497
||| ||||||||| || |||||||||| ||||||| ||| || || ||||| |||| |||
Sbjct 1438 ATCTGATTCCCCAACTGTTGGATGGGGAGGTCCTGTTGGATATGTATACCA-AAAGGCTT 1496
Query 1498 ATCTGGAGTTCTTCTGTTCAAAGGATAAGTTAGACACACTTGTGGAGAAATCCAAAGCTT 1557
|||| ||||||||||| |||||||| || ||||| || | |||||||||| ||||||||
Sbjct 1497 ATCTAGAGTTCTTCTGCTCAAAGGAGAAATTAGATGCAGTGGTGGAGAAATGCAAAGCTT 1556
Query 1558 TTCC-TCTTATCACCTACATGGCCGTGAACAAAGCAGAGA-ATTGGGTATCAAACACCGA 1615
| || || || || |||||||| |||||||||| ||| | | |||||||| ||||| |
Sbjct 1557 TGCCATCG-ATTACTTACATGGCTGTGAACAAAGGAGA-ACAGTGGGTATCGAACACTGC 1614
Query 1616 TGAGTGC-GATGTGAATGCAGTTACTTGGGGAGTGTTCCCAGCTAAGGAGGTTATTCAAC 1674
| || ||||||||||| || ||||||||||| ||||| |||||||| | |||||||
Sbjct 1615 CCAA-GCTGATGTGAATGCTGTAACTTGGGGAGTTTTCCCGGCTAAGGAAATCATTCAAC 1673
Query 1675 CGACGATCGTGGATCCAGCCAGTTTCAAAGTCTGGAAAGACGAAGCGTTTGAGATTTGGT 1734
| || || || ||||| || || ||||| |||||||| || ||||| ||||||| |||||
Sbjct 1674 CAACCATTGTCGATCCCGCTAGCTTCAACGTCTGGAAGGATGAAGCATTTGAGACTTGGT 1733
Query 1735 CAAGAAGCTGGGCTAATTTGTACCCAGAAGATGACCCTTCTAGAAAATTGCTCGAGGAGG 1794
|||||||||||||||| ||||||||||||| |||||||| ||||| |||||||||||||
Sbjct 1734 CAAGAAGCTGGGCTAACTTGTACCCAGAAGCCGACCCTTCCAGAAACTTGCTCGAGGAGG 1793
Query 1795 TGAAGAACAGCTACTATTTGGTAAGCTTAGTGGACAACGATTACATCAATGGTGATATAT 1854
|||||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||
Sbjct 1794 TGAAGAACAGCTACTATTTGGTAAGCTTGGTGGAGAACGATTACATCAATGGTGACATAT 1853
Query 1855 TTGCTGTCTTTGCTTGATCTCCGAGAAAACCAA 1887
| || || |||||| ||||| ||||||| |||
Sbjct 1854 TCGCGGTGTTTGCT-GATCTTTGAGAAAATCAA 1885
> AT3G59980.1 | Symbols: | Nucleic acid-binding, OB-fold-like
protein | chr3:22154244-22155641 REVERSE LENGTH=1177
Length=1177
Score = 388 bits (210), Expect = 8e-107
Identities = 231/241 (96%), Gaps = 2/241 (1%)
Strand=Plus/Minus
Query 1792 AGGTGAAGAACAGCTACTATTTGGTAAGCTTAGTGGACAACGATTACATCAATGGTGATA 1851
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1177 AGGTGAAGAACAGCTACTATTTGGTAAGCTTAGTGGACAACAATTACATCAATGGTGATA 1118
Query 1852 TATT-TGCTGTCTTTGCTTGATCTCCGAGAAAACCAACGGCAAAGAGGAAACATTCGATT 1910
| || | ||||||||||||||||||||||||||||| |||| ||||||||||||||||||
Sbjct 1117 TCTTCT-CTGTCTTTGCTTGATCTCCGAGAAAACCACCGGCGAAGAGGAAACATTCGATT 1059
Query 1911 TCGCGATTTGTTTTGTACCTTTTAAAGTTACTTTTGATTCGTAATAACCTTATTTTGATG 1970
||| |||||||||||||||||||||||||| ||||||||||||||||||||| |||||||
Sbjct 1058 TCGAGATTTGTTTTGTACCTTTTAAAGTTATTTTTGATTCGTAATAACCTTACTTTGATG 999
Query 1971 AATCAACAAAAACATCAGTTTGATTGCAATGaaaaaaaTCGCCTTAGCGGTCTGTTCTTT 2030
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 998 AATCAACAAAAACATCAGTTTGATTGCAATGAAAAAAATCGCCTTAGCGGTTTGTTCTTT 939
Query 2031 C 2031
|
Sbjct 938 C 938
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 100652092725
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5