BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg486467
Length=1577
Score E
Sequences producing significant alignments: (Bits) Value
AT3G59990.1 | Symbols: MAP2B | methionine aminopeptidase 2B | c... 2484 0.0
AT2G44180.1 | Symbols: MAP2A | methionine aminopeptidase 2A | c... 1308 0.0
> AT3G59990.1 | Symbols: MAP2B | methionine aminopeptidase 2B |
chr3:22155719-22158730 REVERSE LENGTH=1621
Length=1621
Score = 2484 bits (1345), Expect = 0.0
Identities = 1486/1554 (96%), Gaps = 10/1554 (1%)
Strand=Plus/Plus
Query 27 AAA-GTGCTTTGTTATTAAGGTGAGAATCGAATTTGAAGATGGCGAGCGAAAGCCCTGAT 85
||| |||||||||||| ||||||| ||||| |||||||||||||||||||||| |||||
Sbjct 62 AAAGGTGCTTTGTTATCAAGGTGAAAATCG-ATTTGAAGATGGCGAGCGAAAGTCCTGA- 119
Query 86 GTTGTTGTTGTTGTAGCTCCCGTGGTGGAGAATGGCGGCGCTGAATCCTCTAATGGAAAA 145
||||| |||||||||||| ||||||||||||||||||||||| ||||||||||| |||
Sbjct 120 --TGTTGCTGTTGTAGCTCCGGTGGTGGAGAATGGCGGCGCTGAGTCCTCTAATGGTAAA 177
Query 146 GATGAACAATTGGAATCTGAGCTTTCGAAGAAGCTTGAGATCGCAGAAGATGCTAAAGAG 205
|| |||||||||||||||||||||||||||||||||||||| |||||||||| | |||||
Sbjct 178 GAGGAACAATTGGAATCTGAGCTTTCGAAGAAGCTTGAGATTGCAGAAGATGGTCAAGAG 237
Query 206 GACAACGATGAAGATGAAGGAAGCAAAGCTGAGGCTTCAACgaagaagaagaagaagaag 265
|| ||||||| ||| |||||||||||||||||| |||||||||||||||||||||||||
Sbjct 238 GAGAACGATGGAGAAGAAGGAAGCAAAGCTGAGACTTCAACGAAGAAGAAGAAGAAGAAA 297
Query 266 aataaaagcaagaagaagaaggaaCTCCCTCAACAGACTAATCCACCTTCGATTCCTGTC 325
||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||
Sbjct 298 AATAAAAGCAAGAAGAAGAAGGAACTCCCTCAACAGACTGATCCACCTTCAATTCCTGTC 357
Query 326 GTTGAGCTCTTCCCATCTGGAGAGTTTCCTGAAGGTGAAATCCAAGAGTATAAGGATGAT 385
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 358 GTTGAGCTCTTCCCATCAGGAGAGTTTCCTGAAGGTGAAATCCAAGAGTATAAGGATGAT 417
Query 386 AATCTGTGGAGAACAACATCTGAAGAGAAGAGAGAGTTGGAGCGTTTGGAAAAGCCAATA 445
||||| |||||||||||||||||||||||||||||| |||||||||| ||||||||||||
Sbjct 418 AATCTTTGGAGAACAACATCTGAAGAGAAGAGAGAGCTGGAGCGTTTTGAAAAGCCAATA 477
Query 446 TACAACTCTGTTCGCCAAGCTGCAGAAGTTCATCGCCAGGTTCGTAAATATGTCAGAAGC 505
|| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 478 TATAACTCTGTTCGCCGAGCTGCAGAAGTTCATCGCCAGGTTCGTAAATATGTCAGAAGC 537
Query 506 ATAGTGAAGCCTGGAATGTTGATGACTGATATATGTGAGACCTTAGAGAATACTGTTCGC 565
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 538 ATAGTGAAGCCTGGAATGTTGATGACTGATATATGTGAGACCCTAGAGAATACTGTTCGT 597
Query 566 AAGTTGATATCAGAGAATGGTCTTCAAGCTGGTATTGCATTCCCTACAGGATGCTCTTTG 625
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 598 AAGTTGATATCAGAGAATGGTCTTCAAGCTGGTATTGCATTCCCTACAGGATGCTCTTTG 657
Query 626 AATTGGGTCGCTGCTCATTGGACACCAAACTCTGGAGATAAGACTGTACTTCAGTATGAC 685
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 658 AATTGGGTCGCTGCTCATTGGACACCAAACTCTGGAGATAAGACTGTACTTCAGTACGAC 717
Query 686 GATGTTATGAAATTGGATTTTGGAACACATATTGATGGGCATATTATTGACTGTGCATTT 745
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 718 GATGTTATGAAATTGGACTTTGGAACACATATTGATGGGCATATTATTGACTGTGCATTT 777
Query 746 ACAGTTGCGTTCAACCCTATGTTCGATCCTCTCTTAGCAGCCTCTCGTGAAGCTACGTAT 805
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 778 ACAGTTGCCTTCAACCCTATGTTCGATCCTCTCTTAGCAGCCTCTCGTGAAGCTACGTAT 837
Query 806 ACCGGTATCAAGGAAGCTGGGATCGATGTCCGTCTCTGTGATATCGGTGCTGCAATTCAG 865
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 838 ACCGGTATCAAGGAAGCTGGGATCGATGTCCGTCTCTGTGATATCGGTGCTGCTATTCAG 897
Query 866 GAGGTCATGGAGTCTTATGAGGTTGAAATCAATGGAAAGGTCTTCCAAGTCAAAAGTATC 925
|||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||
Sbjct 898 GAGGTCATGGAGTCTTATGAGGTTGAAATCAACGGAAAGGTCTTCCAAGTTAAAAGTATC 957
Query 926 AGAAACTTGAATGGGCATAGCATTGGACCCTATCAGATACATGCTGGGAAATCCGTTCCT 985
||||||||||||| || ||||||||||||||||||||||||||||||||||| ||||||
Sbjct 958 CGAAACTTGAATGGTCACAGCATTGGACCCTATCAGATACATGCTGGGAAATCTGTTCCT 1017
Query 986 ATCGTTAAGGGAGGCGAGCAGACAAAGATGGAAGAGGGCGAGTTTTATGCCATCGAAACA 1045
||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1018 ATCGTAAAAGGAGGCGAGCAGACAAAGATGGAAGAGGGCGAGTTTTATGCCATCGAAACA 1077
Query 1046 TTTGGATCAACCGGGAAAGGATATGTGAGAGAAGACTTAGAATGTAGTCATTACATGAAG 1105
|||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||
Sbjct 1078 TTTGGATCAACCGGGAAAGGATATGTGAGAGAAGACCTAGAATGTAGCCATTACATGAAG 1137
Query 1106 AACTTTGAAGCTAGGC-ACGTCCCCTTGAGGTTGCCTAGAGCAAAACAACTTCTTGCCAC 1164
|||||||| ||| ||| |||||||||||||||||||||||||||||||||| ||||| ||
Sbjct 1138 AACTTTGACGCT-GGCCACGTCCCCTTGAGGTTGCCTAGAGCAAAACAACTCCTTGCAAC 1196
Query 1165 CATTAACAAGAATTTCTCGACGCTCGCCTTCTGCAGACGCTATTTGGACCGCATTGGTGA 1224
||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct 1197 CATTAACAAGAATTTCTCGACTCTCGCCTTCTGCAGACGTTATTTGGACCGCATTGGTGA 1256
Query 1225 AACCAAATACTTAATGGCTCTAAAGAATCTGTGTGATTCTGGCATTGTTCAGCCATATCC 1284
|||||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||
Sbjct 1257 AACCAAATACTTAATGGCTCTAAAGAATCTTTGTGACTCTGGCATTGTTCAGCCGTATCC 1316
Query 1285 TCCTCTGTGTGATGTGAAGGGAAGCTACGTATCACAGTTTGAACACACCATTTTACTGCG 1344
|||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||
Sbjct 1317 TCCTCTGTGTGATGTGAAAGGAAGCTATGTATCACAGTTTGAACACACCATTTTACTGCG 1376
Query 1345 ACCTACTTGCAAAGAGGTTCTTTCCAAGGGAGACGACTACTGATTCAGATCCTCTGTTTT 1404
||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1377 ACCTACTTGCAAAGAAGTTCTCTCCAAGGGAGACGACTACTGATTCAGATCCTCTGTTTT 1436
Query 1405 TGCTCTGTTTGC-TTAATTATCTCATACTGTTGTTGAGATTGTACACTTGCTTGTTTCTT 1463
||||||||| | || |||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1437 -GCTCTGTTTACCTTTATTATCTCATACTGTTGTCGAGATTGTACACTTGCTTGTTTCTT 1495
Query 1464 TTGTCGTCGTTAACACAAGCTTTGAATCCTTTTATAAAAAGCTTCAATGCCTCTGTTaaa 1523
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1496 TTGTCGTCGTTAACACAAGCTTTGAATCCTTTTATAAAAAGCTTCAGTGCCTCTGTTAAA 1555
Query 1524 aaaaaaaCTATGAATTTGCCTTGAACATGAATTTGCTCATCAATCTTACTAGAA 1577
|||||| ||||| ||||||| |||||||||||||||||||||||||||||||||
Sbjct 1556 AAAAAA-CTATGTATTTGCCATGAACATGAATTTGCTCATCAATCTTACTAGAA 1608
> AT2G44180.1 | Symbols: MAP2A | methionine aminopeptidase 2A |
chr2:18269243-18271860 REVERSE LENGTH=1600
Length=1600
Score = 1308 bits (708), Expect = 0.0
Identities = 1031/1188 (87%), Gaps = 17/1188 (1%)
Strand=Plus/Plus
Query 208 CAACGATGAAGATGAAGGA-AGCAAAGCTGAGGCTTCAACgaagaagaagaagaagaaga 266
||| || ||||| || ||| | ||||||||||||||||||||||||||||||||||| |
Sbjct 223 CAA-GAAGAAGAAGATGGACTG-AAAGCTGAGGCTTCAACGAAGAAGAAGAAGAAGAA-A 279
Query 267 a-taaaagcaagaagaagaaggaaCTC-CCTCAACAGACTAATCCACCTTCGATTCCTG- 323
| |||||||||||||||||| || || | |||||||||| |||| ||||| |||||||
Sbjct 280 AGTAAAAGCAAGAAGAAGAA-GAGTTCTCTTCAACAGACTGATCCTCCTTCAATTCCTGT 338
Query 324 TCGTTGAGCTCTTCCCATCTGGAGAGTTTCCTGAAGGTGAAATCCAAGAGTATAAGGATG 383
|| ||||||||||||| |||||||| |||||| |||||||||||||| |||| || ||||
Sbjct 339 TC-TTGAGCTCTTCCCTTCTGGAGATTTTCCTCAAGGTGAAATCCAACAGTACAATGATG 397
Query 384 ATAATCTGTGGAGAACAACATCTGAAGAGAAGAGAGAGTTGGAGCGTTTGGAAAAGCCAA 443
||||| |||||||||||||||||||||||||||||||| ||||| | || ||||||| |
Sbjct 398 ATAATTTGTGGAGAACAACATCTGAAGAGAAGAGAGAGATGGAGAGGCTGCAAAAGCCGA 457
Query 444 TATACAACTCTGTTCGCCAAGCTGCAGAAGTTCATCGCCAGGTTCGTAAATATGTCAGAA 503
|||| |||||| |||||||||| || ||||||||||| || ||| | || ||| | ||||
Sbjct 458 TATATAACTCTCTTCGCCAAGCAGCGGAAGTTCATCGTCAAGTTAGGAAGTATATGAGAA 517
Query 504 GCATAGTGAAGCCTGGAATGTTGATGACTGATATATGTGAGACCTTAGAGAATACTGTTC 563
| ||| ||||||||||||||||||||| |||| | |||||||| |||||||| |||||||
Sbjct 518 GTATATTGAAGCCTGGAATGTTGATGATTGATCTCTGTGAGACTTTAGAGAACACTGTTC 577
Query 564 GCAAGTTGATATCAGAGAATGGTCTTCAAGCTGGTATTGCATTCCCTACAGGATGCTCTT 623
| ||||||||||||||||||||||||||||||||||| || || ||||||||||| ||
Sbjct 578 GTAAGTTGATATCAGAGAATGGTCTTCAAGCTGGTATCGCCTTTCCTACAGGATGTTCAC 637
Query 624 TGAATTGGGTCGCTGCTCATTGGACACCAAACTCTGGAGATAAGACTGTACTTCAGTATG 683
||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 638 TGAATAATGTTGCTGCTCATTGGACACCAAACTCTGGAGATAAGACTGTCCTTCAGTATG 697
Query 684 ACGATGTTATGAAATTGGATTTTGGAACACATATTGATGGGCATATTATTGACTGTGCAT 743
| ||||| ||||| |||||||||||||||||||||||||||| ||| |||| | ||| |
Sbjct 698 ATGATGTGATGAAGCTGGATTTTGGAACACATATTGATGGGCACATTGTTGATTCTGCTT 757
Query 744 TTACAGTTGCGTTCAACCCTATGTTCGATCCTCTCTTAGCAGCCTCTCGTGAAGCTACGT 803
|||||||||||||||| |||||||| |||||||| ||||||||||| ||||| || || |
Sbjct 758 TTACAGTTGCGTTCAATCCTATGTTTGATCCTCTTTTAGCAGCCTCGCGTGACGCAACAT 817
Query 804 ATACCGGTATCAAGGAAGCTGGGATCGATGTCCGTCTCTGTGATATCGGTGCTGCAATTC 863
|||| |||||||||||||| ||| | |||||||| ||||||||| | ||||||||| |||
Sbjct 818 ATACTGGTATCAAGGAAGCCGGGGTAGATGTCCGGCTCTGTGATGTTGGTGCTGCAGTTC 877
Query 864 AGGAGGTCATGGAGTCTTATGAGGTTGAAATCAATGGAAAGGTCTTCCAAGTCAAAAGTA 923
|||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||
Sbjct 878 AGGAGGTCATGGAGTCTTATGAGGTTGAAATCAATGGAAAAGTCTACCAAGTCAAAAGTA 937
Query 924 TCAGAAACTTGAATGGGCATAGCATTGGACCCTATCAGATACATGCTGGGAAATCCGTTC 983
|||||||| |||||||||| |||||||||| |||||||||||| |||| ||||| ||||
Sbjct 938 TCAGAAACCTGAATGGGCACAGCATTGGACGCTATCAGATACACGCTGAAAAATCAGTTC 997
Query 984 CTA-TCGTTA-AGGGAGGCGAGCAGAC-AAAGATGGAAGAGGGCGAGTTTTATGCCATCG 1040
||| | |||| ||| |||||||||||| ||| ||||||||||| || || |||||||| |
Sbjct 998 CTAAT-GTTAGAGG-AGGCGAGCAGACGAAA-ATGGAAGAGGGTGAATTATATGCCATTG 1054
Query 1041 AAACATTTGGATCAACCGGGAAAGGATATGTGAGAGAAGACTTAGAATGTAGTCATTACA 1100
|||| ||||||||||| |||||||||||||| |||||||||||||||||||| |||||||
Sbjct 1055 AAACTTTTGGATCAACAGGGAAAGGATATGTAAGAGAAGACTTAGAATGTAGCCATTACA 1114
Query 1101 TGAAGAACTTTGAAGCTAGG-CACGTCCCCTTGAGGTTGCCTAGAGCAAAACAACTTCTT 1159
|||| |||| ||| | | || || || || |||||||| || || ||||||||||| |||
Sbjct 1115 TGAAAAACTATGATG-TGGGTCATGTACCTTTGAGGTTACCAAGGGCAAAACAACTCCTT 1173
Query 1160 GCCACCATTAACAAGAATTTCTCGACGCTCGCCTTCTGCAGACGCTATTTGGACCGCATT 1219
||||| ||||||||||| ||||| ||||| |||||||||||||| |||||||||||| ||
Sbjct 1174 GCCACTATTAACAAGAACTTCTCCACGCTAGCCTTCTGCAGACGTTATTTGGACCGCCTT 1233
Query 1220 GGTGAAACCAAATACTTAATGGCTCTAAAGAATCTGTGTGATTCTGGCATTGTTCAGCCA 1279
|||||||| |||||||| |||||| |||||||||| |||||||||||||| || |||||
Sbjct 1234 GGTGAAACAAAATACTTGATGGCTTTAAAGAATCTTTGTGATTCTGGCATAATTGAGCCA 1293
Query 1280 TATCCTCCTCTGTGTGATGTGAAGGGAAGCTACGTATCACAGTTTGAACACACCATTTTA 1339
| |||||| |||||||||| || |||||||| | || |||||||| || || || |
Sbjct 1294 TGTCCTCCAGTGTGTGATGTCAAAGGAAGCTATATTTCTCAGTTTGAGCATACAATCCTG 1353
Query 1340 CTGCGACCTACTTGCAAAGAGGTTCTTTCCAAGGGAGACGACTACTGA 1387
||||||| |||||||||||| || ||||||| |||||||| || |||
Sbjct 1354 TTGCGACCAACTTGCAAAGAGATTATTTCCAAAGGAGACGATTATTGA 1401
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 77861045295
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5