BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg486566 Length=1841 Score E Sequences producing significant alignments: (Bits) Value AT3G60900.1 | Symbols: FLA10 | FASCICLIN-like arabinogalactan-p... 2407 0.0 AT2G45470.1 | Symbols: FLA8, AGP8 | FASCICLIN-like arabinogalac... 1107 0.0 > AT3G60900.1 | Symbols: FLA10 | FASCICLIN-like arabinogalactan-protein 10 | chr3:22499360-22501239 REVERSE LENGTH=1880 Length=1880 Score = 2407 bits (1303), Expect = 0.0 Identities = 1701/1882 (90%), Gaps = 72/1882 (4%) Strand=Plus/Plus Query 3 tttttATCTGAGTGCCTTTTACAAAATTTTGGATGATTATCTAATGAGCATCAACAAATA 62 |||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| Sbjct 24 TTTTTATCTGAGTGCCTTTTACAAAATTTTGGATGATTATCTAATGAGCATCCATAAATA 83 Query 63 AACTCAAA--TTAGTTAAGCTAGTTGACCATGGTTAACTCTAGCTGATAATCAT-AATGG 119 | |||||| |||||| ||||| ||||||||||||||||||| | | || || ||| | Sbjct 84 AGCTCAAATTTTAGTT-AGCTACTTGACCATGGTTAACTCTAAC-AAGGATGATAAATTG 141 Query 120 ATAATGATATAACGGTT--G--C---T--TTTTGG-A-A-GACGAACCATACAA-AAAGA 166 ||||||||||||||||| | | | |||||| | | ||||||||||| || ||||| Sbjct 142 ATAATGATATAACGGTTCGGTTCGGTTGCTTTTGGAAGAGGACGAACCATA-AAGAAAGA 200 Query 167 AGCCCAAAG----CCCATTTTCGTGATTTCAGACTTTTTAG--AAA--AAGCAAGCACGT 218 ||| ||||| ||||||||||||||| ||| |||||||| ||| |||| ||||||| Sbjct 201 AGCTCAAAGCCCACCCATTTTCGTGATTACAGGCTTTTTAGCAAAAGGAAGC-AGCACGT 259 Query 219 GTTCTTATATTAACCATAGTTAACTCTTTAGTATAACCATGGTTAATATTTAACCTCTTC 278 ||||| | |||||||||||||||||||| | ||||||||||||||| ||||||||||||| Sbjct 260 GTTCTCAAATTAACCATAGTTAACTCTTCAATATAACCATGGTTAACATTTAACCTCTTC 319 Query 279 TTCTTCTTATTACATAACTTCATTTCTCACTCATAATTGTCTTCTCACTTTCACTTCTCC 338 ||||||||| | |||||||| |||||| | |||||||||||||||| ||||||| Sbjct 320 TTCTTCTTA-T---TAACTTCA----TCACTC-TCTTTGTCTTCTCACTTTCTCTTCTCC 370 Query 339 ACAGTTCGACTTAACCGTCCAAATTCCAATGGCGGTATCACGAGCTTTCTCTCTCTTCGC 398 ||||||| ||| |||| ||||||||||||||||| ||||||||||||| |||||||||| Sbjct 371 ACAGTTCAACTCAACCTTCCAAATTCCAATGGCGACATCACGAGCTTTCACTCTCTTCGC 430 Query 399 ATTCACTTTATCTCTCCTTGCCGTCGCTTATACCGTCTCCGGCCATAACATCACTCAAAT 458 ||||| ||||||||||| |||| |||| ||||||||||||||||||||| |||||||| Sbjct 431 TTTCACATTATCTCTCCTCACCGTAGCTTCTACCGTCTCCGGCCATAACATTACTCAAAT 490 Query 459 CCTATCCGATACGCCGGAATATTCCTCATTCAACAGCTACCTTTCTCAGACAAAGCTCGC 518 ||| || |||||||||||||||||||||||||||| |||||||||||| ||||| ||||| Sbjct 491 CCTCTCTGATACGCCGGAATATTCCTCATTCAACAACTACCTTTCTCAAACAAAACTCGC 550 Query 519 CGACGAAATCAACAGCCGCACTACCATCACCGTCCTTGTCCTCAACAATGGCGCAATGTC 578 |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| Sbjct 551 CGACGAAATCAACAGCCGCACTACAATCACCGTCCTTGTTCTCAACAATGGCGCAATGTC 610 Query 579 TGCCCTCGCCGGAAAACATCCACTCTCCGTCGTCAAAAATGCTCTCAGCCTCCTCGTCCT 638 | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 611 TTCCCTCGCCGGAAAACACCCACTCTCCGTCGTCAAAAATGCTCTCAGCCTCCTCGTCCT 670 Query 639 CCTCGATTACTACGATCCTTTAAAACTCCATCAGCTCTCTAAAGGCTCAACTCTCACCAC 698 |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 671 CCTCGACTACTACGATCCTTTAAAACTCCATCAGCTCTCTAAAGGCACAACTCTCACCAC 730 Query 699 CACGCTTTACCAAACCACCGGACACGCTCCCGGAAACCTAGGATTCGTCAACGTCACCGA 758 ||||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||| Sbjct 731 CACGCTTTACCAAACCACCGGACACGCTCTCGGGAACCTAGGATTCGTTAACGTCACCGA 790 Query 759 TCTCAAAGGAGGCAAAGTCGGATTTGGCTCCGCCGCTCCTGGATCCAAGCTCGATTCTTC 818 ||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| || Sbjct 791 TCTCAAAGGAGGCAAAGTCGGCTTTGGCTCCGCCGCTCCTGGCTCCAAGCTCGATTCCTC 850 Query 819 TTACACCAAATCCGTTAAACAAATCCCTTACAACATCTCCGTTCTCGAAATCAACGCTCC 878 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 851 TTACACCAAATCCGTTAAACAAATCCCTTACAACATCTCCGTTCTCGAAATCAACGCTCC 910 Query 879 GATCATCGCTCCCGGAATCTTAACCGCACCTGCTCCTTCTTCCGGCGGTGTTAACAACAT 938 |||||||||||||||||||||||||||||||||||||||||||| ||| |||| |||||| Sbjct 911 GATCATCGCTCCCGGAATCTTAACCGCACCTGCTCCTTCTTCCGCCGGAGTTAGCAACAT 970 Query 939 CACCGGACTTCTCGAGAAAGCCGGTTGCAAAACCTTCGCGAATTTGCTCGTATCGAGTGG 998 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 971 CACCGGACTTCTCGAGAAAGCCGGTTGCAAAACCTTCGCGAATTTGCTCGTATCGAGCGG 1030 Query 999 TGTTCTTAAAACCTACGAATCCACCGTTGAAAAAGGTTTGACGGTTTTTGCACCGTCCGA 1058 |||| ||||||| | ||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 1031 TGTTATTAAAACATTCGAATCCACCGTTGAAAAAGGCTTGACGGTTTTTGCACCGTCCGA 1090 Query 1059 TGAAGCTTTTAAAGCTAAAGGTGTACCAGATCTGACGAACCTCACGCAAGCTGAGGTGGT 1118 ||||||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||| Sbjct 1091 TGAAGCTTTTAAAGCTAGAGGTGTACCAGATCTGACGAATCTCACACAAGCTGAGGTGGT 1150 Query 1119 CTCGCTCCTAGAGTATCACGCCCTCGCTGAATACAAACCCAAAGGATCGTTGAAGAATAA 1178 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| Sbjct 1151 CTCGCTCCTAGAGTATCACGCCCTCGCTGAATACAAACCCAAAGGATCGTTAAAGACTAA 1210 Query 1179 CAAAGACGCTATCTCCACTTTAGCCACTAACGGCGCCGGTAAATACGATTTAACGACGTC 1238 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1211 CAAAGACGCTATCTCCACTTTAGCCACTAACGGCGCCGGTAAATACGATTTAACGACGTC 1270 Query 1239 AACTTCTGGCGACGAGGTTATCCTCCATACCGGTGTTGGTCCGTCGAGACTCGCCGACAC 1298 |||||| || ||||||||||| ||||||||||| |||||||||||||||||||||||||| Sbjct 1271 AACTTCCGGTGACGAGGTTATTCTCCATACCGGCGTTGGTCCGTCGAGACTCGCCGACAC 1330 Query 1299 GGTGGTCGATGAGACACCTGTCGTGATATTCACGGTGGATAATGTACTCCTCCCCACCGA 1358 ||||||||||||||||||||| || |||||||| ||||||||||| ||||| ||| | || Sbjct 1331 GGTGGTCGATGAGACACCTGTTGTTATATTCACTGTGGATAATGTGCTCCTTCCCGCTGA 1390 Query 1359 GCTTTTTGGAAAGTCTCCATCTCCGGCGCCGGCACCGGCACCGGAGCCAGTGAGTGCACC 1418 |||||| ||||| ||| |||| |||||||||||||||| | | |||||||||||||| Sbjct 1391 GCTTTTCGGAAAATCTTCATCGCCGGCGCCGGCACCGG-A--G---CCAGTGAGTGCACC 1444 Query 1419 GACCCCGTCTCCGGCTAA-TGCACCGTCTCCAGTGGAAGCACCTTCTCCAACTGCAGCTT 1477 ||| ||| | |||||||| | |||||||||| |||||||||||||||||||| ||||||| Sbjct 1445 GACACCGACCCCGGCTAAGT-CACCGTCTCCTGTGGAAGCACCTTCTCCAACCGCAGCTT 1503 Query 1478 CTCCGCCAGCACCTCCGGTGGATGAATCTTCGCCGGAAGGAGCCCCGTCAGACTCGCCGA 1537 ||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||||||| Sbjct 1504 CTCCGCCAGCACCACCGGTGGATGAATCTTCACCGGAAGGAGCTCCGTCAGACTCGCCGA 1563 Query 1538 CAAGTTCAGAGAACAGTAATGCGAAAAACGCAGCGTTTCACGTGAAGGCTTCTGCGTTGT 1597 ||||||||||||||||||||||||||||||| ||||||||||| || ||| ||||||||| Sbjct 1564 CAAGTTCAGAGAACAGTAATGCGAAAAACGCGGCGTTTCACGTTAACGCTCCTGCGTTGT 1623 Query 1598 TCACCGCATTGGTGGCTCTTGCCGCCACATCTCTCTTGTCATaaaaaaaaCCGTAATTAC 1657 ||||||||||||| || ||||||||||||||||||||| ||||| |||||| ||||||| Sbjct 1624 TCACCGCATTGGTCACTATTGCCGCCACATCTCTCTTGTTATAAACAAAACCTTAATTAC 1683 Query 1658 GAAGACTGCCATTGTCT-CC--C------TT-------CTTTGTGATTCTGTTTGTTAAA 1701 ||||||||||||||||| || | || ||||||||| |||||||||||| Sbjct 1684 GAAGACTGCCATTGTCTTCCTTCGACGAGTTTTTATTTCTTTGTGATGCTGTTTGTTAAA 1743 Query 1702 GACTGGGA-TTAGAGTGTTAAGGTTTAAGTT-AATCTTTTTAGTTAATTCAGGCTTGGAT 1759 ||||||| ||||||||||| |||||| ||| |||||| |||||||||| || |||||| Sbjct 1744 AACTGGGAATTAGAGTGTTACGGTTTACGTTTAATCTTATTAGTTAATTTAGAATTGGAT 1803 Query 1760 GAttgtttttgttttgttttgGTCTGTTCGTTTgtagtagtagtagtagtGTTGAAATAT 1819 ||||||| ||||||||||||||| || ||| || | | |||||||||| ||||||| Sbjct 1804 GATTGTTATTGTTTTGTTTTGGT--GT--GTTAGT--T--T-GTAGTAGTGTCGAAATAT 1854 Query 1820 TGAGATCTTCTAATTAACTAGT 1841 ||||||||||||||| |||||| Sbjct 1855 TGAGATCTTCTAATTGACTAGT 1876 > AT2G45470.1 | Symbols: FLA8, AGP8 | FASCICLIN-like arabinogalactan protein 8 | chr2:18742540-18744111 REVERSE LENGTH=1572 Length=1572 Score = 1107 bits (599), Expect = 0.0 Identities = 1041/1252 (83%), Gaps = 40/1252 (3%) Strand=Plus/Plus Query 367 ATGGCGGTATCACGAG-CTTTCTCTCTCTTCGCATTCACTTTATCTCTCCTTGCCGTCGC 425 ||||||| |||| || | ||||| ||| |||| |||||||| || ||||| ||| | || Sbjct 53 ATGGCGGCGTCAC-AGACATTCTCACTCCTCGCCTTCACTTTCTCCCTCCTCGCCTTTGC 111 Query 426 TTATACCGTCTCCGGCCATAACATCACTCAAATCCTATCCGATACGCCGGAATATTCCTC 485 || ||||| |||| ||||||||||||||||| | ||| | || || || || || Sbjct 112 TTCCACCGTGAGTAGCCACAACATCACTCAAATCCTCGCTGATTCTCCAGATTACTCTTC 171 Query 486 ATTCAACAGCTACCTTTCTCAGACAAAGCTCGCCGACGAAATCAACAGCCGCACTACCAT 545 ||||||||||||||||||||||| |||||||||||||| |||||||||||||| || || Sbjct 172 CTTCAACAGCTACCTTTCTCAGACGAAGCTCGCCGACGAGATCAACAGCCGCACGACGAT 231 Query 546 CACCGTCCTTGTCCTCAACAATGGCGCAATGTCTGCCCTCGCCGGAAAACATCCACTCTC 605 || || || ||||| |||||||||||||||||||| ||||||||||||||||||||||| Sbjct 232 TACAGTTCTCGTCCTTAACAATGGCGCAATGTCTGCTCTCGCCGGAAAACATCCACTCTC 291 Query 606 CGTCGTCAAAAATGCTCTCAGCCTCCTCGTCCTCCTCGATTACTACGATCCTTTAAAACT 665 ||| | |||| ||| | |||||||||||||||||||||||||||||||| |||||| Sbjct 292 CGTTATTAAAAGCGCTTTAAGCCTCCTCGTCCTCCTCGATTACTACGATCCACAAAAACT 351 Query 666 CCATC-AGCTCTCTAAAGGCTCAACTCTCACCACCACGCTTTACCAAACCACCGGACACG 724 ||| | || |||| |||||| |||||||| ||||||| |||||||||||||||||| ||| Sbjct 352 CCA-CAAGATCTCCAAAGGCACAACTCTCTCCACCACACTTTACCAAACCACCGGAAACG 410 Query 725 CTCCCGGAAACCTAGGATTCGTCAACGTCACCGATCTCAAAGGAGGCAAAGTCGGATTTG 784 |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||| Sbjct 411 CTCCCGGAAACCTAGGATTCGTCAACATCACCGATCTTAAAGGAGGCAAAGTCGGATTTG 470 Query 785 GCTCCGCCGCTCCTGGATCCAAGCTCGATTCTTCTTACACCAAATCCGTTAAACAAATCC 844 ||||||||||| | || ||||| |||||||| |||||||||||||||||||||||||||| Sbjct 471 GCTCCGCCGCTTCAGGTTCCAAACTCGATTCATCTTACACCAAATCCGTTAAACAAATCC 530 Query 845 CTTACAACATCTCCGTTCTCGAAATCAACGCTCCGATCATCGCTCCCGGAATCTTAACCG 904 ||||||||||||| | ||||| || | ||||||||||||||||||||| | ||||||| Sbjct 531 CTTACAACATCTCAATCCTCGAGATTGATGCTCCGATCATCGCTCCCGGAGTTTTAACCG 590 Query 905 CACCTGCTCCTTCTTCCGGCGGTGTTAACAACATCACCGGACTT-CTCGAGAAAGCCGGT 963 | ||||||||||| || | ||| || | |||||||||| || ||||| ||||||||| Sbjct 591 CTCCTGCTCCTTCCGCCTCCT-TGTCAA-A-CATCACCGGA-TTACTCGAAAAAGCCGGT 646 Query 964 TGCAAAACCTTCGCGAATTTGCTCGTATCGAGTGGTGTTCTTAAAACCTACGAATCCACC 1023 ||||||||||| || |||||||| || || ||||| || || || || ||||||||| || Sbjct 647 TGCAAAACCTTTGCTAATTTGCTTGTCTCAAGTGGAGTACTCAAGACTTACGAATCCGCC 706 Query 1024 GTTGAAAAAGGTTTGACGGTTTTTGCACCGTCCGATGAAGCTTTTAAAGCTAAAGGTGTA 1083 ||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 707 GTTGAAAAAGGCTTGACGGTTTTTGCACCGTCCGATGAAGCTTTTAAAGCTGAAGGTGTA 766 Query 1084 CCAGATCTGACGAACCTCACGCAAGCTGAGGTGGTCTCGCTCCTAGAGTATCACGCCCTC 1143 |||||||||||||| ||||| ||||||||||| ||||||||| ||||||||||||||||| Sbjct 767 CCAGATCTGACGAAGCTCACACAAGCTGAGGTAGTCTCGCTCTTAGAGTATCACGCCCTC 826 Query 1144 GCTGAATACAAACCCAAAGGATCGTTGAAGAATAACAAAGA-CGCTATCTCCACTTTAGC 1202 ||||| || ||||| ||||| || ||||||| |||||| || | ||||||||| ||||| Sbjct 827 GCTGAGTATAAACCTAAAGGCTCATTGAAGACTAACAA-GAACAATATCTCCACGTTAGC 885 Query 1203 CACTAACGGCGCCGGTAAATACGATTTAACGACGTCAACTTCTGGCGACGAGGTTATCCT 1262 ||||||||||||||| |||| |||| ||||||| || || || |||||||| ||||| || Sbjct 886 CACTAACGGCGCCGGAAAATTCGATCTAACGACCTCTACCTCCGGCGACGAAGTTATTCT 945 Query 1263 CCATACCGGTGTTGGTCCGTCGAGACTCGCCGACACGGTGGTCGATGAGACACCTGTCGT 1322 ||| ||||| |||| ||||||||||||||| ||||| ||| |||| | ||| || || || Sbjct 946 CCACACCGGCGTTGCTCCGTCGAGACTCGCGGACACTGTGCTCGACGCGACTCCGGTTGT 1005 Query 1323 GATATTCACGGTGGATAATGTACTCCTCCCCACCGAGCTTTTTGGAAAGTCTCCATCTCC 1382 ||||||||| ||||||||||| || ||||| | ||||| || ||||| ||| |||||| Sbjct 1006 GATATTCACTGTGGATAATGTCCTTCTCCCTGCTGAGCTATTCGGAAAATCTAAATCTCC 1065 Query 1383 GGCGCCGGCACCGGCACCGGAGCCAGTGAGTGCACCGACCCCGTCTCCGGCTAATGCACC 1442 | ||||||||||| || |||||||| | |||| | ||| | |||| Sbjct 1066 ATCTCCGGCACCGGCGCCTGAGCCAGT---T--ACCG-CACCG---------A---CACC 1107 Query 1443 GTCTCCAGTGGAAGCACCTTCTCCAACTGCAGCTTCTCCGCCAGCACCTCCGGTGGATGA 1502 ||||||| ||| |||||||| || || |||||||| || || ||||||||| ||| || Sbjct 1108 ATCTCCAGCGGATGCACCTTCACCCACCGCAGCTTCACCACCGGCACCTCCGACGGACGA 1167 Query 1503 ATCTTCGCCGGAAGGAGCCCCGTCAGACTCGCCGACAAGTTCAGAGAACAGTAA-TGC-G 1560 || | | |||| | || || ||||||||||| ||| |||||| ||||||||| | | | Sbjct 1168 GTCA-C-C-GGAAAGTGCTCCTTCAGACTCGCCAACAGGTTCAGCGAACAGTAAGT-CAG 1223 Query 1561 AAAAACGCAGCGTTTCACGTGAAGG-CTTC-TGCGTTGTTCACCGCATTGGT 1610 || ||||||| || ||||| | | | | ||||||||||||||||||| Sbjct 1224 CTAA-CGCAGCGGTTGGCGTGA-GCACACCGT-CGTTGTTCACCGCATTGGT 1272 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 91113989175 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5