BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg486567

Length=924
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT3G60910.1 | Symbols:  | S-adenosyl-L-methionine-dependent met...  1520    0.0  


> AT3G60910.1 | Symbols:  | S-adenosyl-L-methionine-dependent methyltransferases 
superfamily protein | chr3:22501698-22503372 
FORWARD LENGTH=978
Length=978

 Score = 1520 bits (823),  Expect = 0.0
 Identities = 897/931 (96%), Gaps = 11/931 (1%)
 Strand=Plus/Plus

Query  1    AGAGAGATGCAGAGGGACGTGTCGAGCTGCAACACTTACAACTATGGAGACGCTCTCTAT  60
            ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  24   AGAAAGATGCAGAGGGACGTGTCGAGCTGCAACACTTACAACTATGGAGACGCTCTCTAT  83

Query  61   TGGGACGCTCGTTACGTGCAAGACGCGCTTTCTTTCGACTGGTACCAACGTTACTCTTCT  120
            |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct  84   TGGGACGCTCGTTACGTGCAAGACGCGCTTTCTTTCGACTGGTACCAATGTTACTCTTCT  143

Query  121  CTCCGCCCTTTTGTCCGCAGCTTCGTCTCTACTTCTTCACGAGTCCTCATGGTTGGCTGT  180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  144  CTCCGCCCTTTTGTCCGCAGCTTCGTCTCTACTTCTTCACGAGTCCTCATGGTTGGCTGT  203

Query  181  GGCAACTCCCTGATGTCAGAGGATATGGTGAATGATGGGTATGAGGACATTATGAATGTT  240
            |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||
Sbjct  204  GGCAACTCCCTGATGTCAGAGGATATGGTGAAGGATGGGTATGAGGACATCATGAATGTT  263

Query  241  GATATCTCCTCAGTGGCTATTGAGATGATGCAAACCAAATATGCATCTGTTCCTCAGCTC  300
            |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  264  GATATCTCTTCAGTGGCTATTGAGATGATGCAAACCAAATATGCATCTGTTCCTCAGCTC  323

Query  301  AAATATATGCAAATGGATGTTAGAGATATGAGTTACTTTGCGGACGATTCCTTTGACACT  360
            ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||
Sbjct  324  AAATATATGCAAATGGATGTTAGAGATATGAGTTACTTTGAAGACGATTCCTTTGACACT  383

Query  361  GTTATTGATAAAGGAACCCTTGATTCATTGATGTGTGGCAGTGATGCTCTTCTAAGTGCT  420
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  384  ATTATTGATAAAGGAACCCTTGATTCATTGATGTGTGGCAGTGATGCTCTTCTAAGTGCT  443

Query  421  TCGAGAATGTTGGGTGAAGTTAGCAGGCTGATTAAACCTGGAGGGACCTACTTTTTGATA  480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  444  TCGAGAATGTTGGGTGAAGTTAGCAGGCTGATTAAACCTGGAGGGACCTACTTTTTGATA  503

Query  481  ACCTACGGTGATCCCAAAGTGAGAATGCCTCATTTGACTCGTTCTGCGTACAACTGGAAG  540
            |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct  504  ACCTACGGTGATCCGAAAGTGAGAATGCCTCATTTGACTCGTTCTGCGTACAACTGGAAG  563

Query  541  ATCTCCTTATACATTATACCAAGACCAGGATTTAAACGGCCAGAAAGTTGCAGCTCGTCA  600
            |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct  564  ATCTCCTTATACATTATACCAAGACCAGGATTTAAAAGGCCAGAAAGTTGCAGCTCGTCA  623

Query  601  GCAAAGTCGTGTATGGAAGCTATACCTATAACAAGTGAGGGAATGTTGCCACATGATTAT  660
            |||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct  624  GCAAAGTCTTGTATGGAAGCTATACCTATAACAAGTGAGGGAATGCTGCCACATGATTAT  683

Query  661  GTTCTGGAGGATCCTGATTCCCATTTTATTTACATATGCAAGAAGATGGACGAAGA--A-  717
            |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||  | 
Sbjct  684  GTTCTGGAGGATCCTGATTCCCATTTTATTTACATATGCAAGAAGAAGGATGAAGATGAA  743

Query  718  GAAGCTCAACTACCCTCATACCCATTAATGGCGGATGTTTTGTAGTGATGGCAT--AGAG  775
            ||||||||||||||||||||||||||||||| |||||||||||||||||||||   ||||
Sbjct  744  GAAGCTCAACTACCCTCATACCCATTAATGGAGGATGTTTTGTAGTGATGGCACGCAGAG  803

Query  776  GCTAAAACAATGCAAAATTGTGCATGTATGTTTTTGTCTTCTTGATCCCCATGTAGATCA  835
            ||| ||||||||||||||||||||||| |||||  ||||| ||||||||||| |||| ||
Sbjct  804  GCTCAAACAATGCAAAATTGTGCATGTGTGTTT--GTCTTTTTGATCCCCATTTAGACCA  861

Query  836  GCCGATCTATTGTTGTATTTTGTATGTGTCTTGTGATCTTATCCCAATTGATAGGTCCGA  895
            | |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||
Sbjct  862  GTCGATCTATTGTTGTATTTT--ATGTGTCTTGTGATCTTATCCCAATTGATAGGTCCGA  919

Query  896  GTCG--GAATTGCTCTATAAACTCATAATAT  924
            |||   |||||||||||||||||||||||||
Sbjct  920  GTCTCAGAATTGCTCTATAAACTCATAATAT  950



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 45160498153


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5