BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg486618
Length=1227
Score E
Sequences producing significant alignments: (Bits) Value
AT3G61430.1 | Symbols: PIP1A, ATPIP1, PIP1, PIP1;1 | plasma mem... 1500 0.0
AT2G45960.3 | Symbols: PIP1B, TMP-A, ATHH2, PIP1;2 | plasma mem... 1013 0.0
AT1G01620.1 | Symbols: PIP1C, TMP-B, PIP1;3 | plasma membrane i... 726 0.0
AT4G35100.1 | Symbols: PIP3, PIP3A, PIP2;7, SIMIP | plasma memb... 350 2e-95
> AT3G61430.1 | Symbols: PIP1A, ATPIP1, PIP1, PIP1;1 | plasma membrane
intrinsic protein 1A | chr3:22733474-22735335 FORWARD
LENGTH=1266
Length=1266
Score = 1500 bits (812), Expect = 0.0
Identities = 1052/1157 (91%), Gaps = 59/1157 (5%)
Strand=Plus/Plus
Query 108 AGAAGAAGaa-aa-aaaaCAAAACCAAAGCTTT-CTAATTTCTCTATAGAGAGATCGAAT 164
|||||||||| || |||| |||| || |||||| | ||||||||| | | ||| | ||
Sbjct 125 AGAAGAAGAAGAAGAAAA-AAAA-CAGAGCTTTAC-AATTTCTCTCT--ACAGA--G-AT 176
Query 165 CGAGTCAAAGATAATGGAAGGCAAAGAAGAAGACGTTAGAGTTGGAGCTAACAAGTTCCC 224
| | ||||| ||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 177 C--G---AAGAT-ATGGAAGGCAAGGAAGAAGACGTTAGAGTTGGAGCTAACAAGTTCCC 230
Query 225 GGAGAGACAACCAATCGGAACATCAGCTCAGAGCGACAAGGACTACAATGAACCACCACC 284
||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct 231 GGAGAGACAACCAATCGGAACATCAGCTCAGAGTGACAAGGACTACAAGGAACCACCACC 290
Query 285 GGCTCCGTTTTTCGAGCCTGGTGAGCTTTCTTCATGGTCCTTTTGGAGAGCTGGGATCGC 344
|||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 291 AGCTCCGTTTTTCGAACCTGGTGAGCTTTCTTCATGGTCTTTTTGGAGAGCTGGGATCGC 350
Query 345 TGAGTTCATCGCTACTTTCCTCTTCCTCTACATCACTGTTTTGACTGTTATGGGAGTTAA 404
|||||||||||||||||| ||||| |||||||||||||| ||||||||||||||||| ||
Sbjct 351 TGAGTTCATCGCTACTTTTCTCTTTCTCTACATCACTGTCTTGACTGTTATGGGAGTGAA 410
Query 405 AAGGTCACCGAATATGTGTGCTTCCGTCGGAATCCAAGGAATCGCTTGGGCTTTCGGTGG 464
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 411 AAGGTCACCGAACATGTGTGCTTCCGTCGGAATCCAAGGAATCGCTTGGGCTTTCGGTGG 470
Query 465 TATGATCTTTGCCTTAGTCTACTGCACCGCTGGTATCTCCGGTGGACACATCAACCCGGC 524
|||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| ||
Sbjct 471 TATGATATTTGCCTTAGTCTACTGTACCGCTGGTATCTCCGGTGGACACATCAACCCAGC 530
Query 525 GGTTACTTTTGGTCTGTTCTTAGCCCGGAAGCTGTCGCTTACCAGAGCTCTGTACTACAT 584
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 531 GGTTACTTTTGGTCTGTTCTTAGCCCGGAAGCTGTCGCTTACTAGAGCTCTGTACTACAT 590
Query 585 AGTGATGCAGTGCTTGGGAGCCATCTGTGGTGCTGGCGTGGTCAAAGGATTCCAGCCTAA 644
||||||||||||||||||||| |||||||||||||| ||||| ||||| |||||||||||
Sbjct 591 AGTGATGCAGTGCTTGGGAGCTATCTGTGGTGCTGGAGTGGTTAAAGGGTTCCAGCCTAA 650
Query 645 GCAATACCAGGCTCTAGGAGGAGGAGCTAACACTGTGGCTCATGGTTACACCAAAGGAAG 704
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 651 GCAATACCAGGCTCTAGGAGGAGGAGCTAACACTGTGGCTCATGGTTACACCAAGGGAAG 710
Query 705 TGGTCTTGGAGCTGAGATTATTGGCACTTTTGTCCTTGTATACACAGTCTTCTCAGCAAC 764
|||||||||||||||||| |||||||| || || ||||||||||||||||||||||||||
Sbjct 711 TGGTCTTGGAGCTGAGATCATTGGCACATTCGTTCTTGTATACACAGTCTTCTCAGCAAC 770
Query 765 TGACGCCAAGAGAAACGCTCGTGACTCTCATGTCCCTATTCTTGCACCACTCCCAATCGG 824
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 771 TGACGCCAAGAGAAATGCTCGTGACTCTCATGTCCCTATTCTTGCACCACTCCCAATCGG 830
Query 825 GTTTGCGGTTTTCTTGGTTCACTTGGCAACCATCCCAATCACTGGCACAGGCATCAACCC 884
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 831 GTTTGCGGTTTTCTTGGTTCACTTGGCAACCATCCCAATCACTGGCACAGGCATCAACCC 890
Query 885 AGCTAGAAGTCTTGGAGCTGCAATCATCTACAACAAAGACCATTCATGGGACGACCACTG 944
||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct 891 AGCTAGAAGCCTTGGAGCTGCAATCATCTACAACAAAGACCATTCCTGGGATGACCACTG 950
Query 945 GGTGTTTTGGGTTGGACCCTTCATTGGAGCTGCACTTGCTGCTCTTTACCATGTGGTTGT 1004
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 951 GGTGTTTTGGGTTGGCCCCTTCATTGGAGCTGCACTTGCTGCTCTTTACCATGTGGTTGT 1010
Query 1005 CATCAGAGCCATCCCTTTCAAATCCAGAAGCTAAGTTAAAACAAGACAACA---C-T-TG 1059
||||||||||||||| ||||| |||||||||||||| ||||||||||| || | | ||
Sbjct 1011 CATCAGAGCCATCCCCTTCAAGTCCAGAAGCTAAGTAAAAACAAGACATCAAGTCCTCTG 1070
Query 1060 -T--C---C-TT------AGTTGCTTCTAT--T------GTTGATCTAC-A--TGTATGT 1095
| | | || |||||||||||| | |||||||||| | |||||||
Sbjct 1071 GTTTCTGGCCTTGTCCTTAGTTGCTTCTATAGTTCTATTGTTGATCTACTACATGTATGT 1130
Query 1096 GTGAAATGTGTTTATCTATATGCCCACTTAATGCAATCTTTGTAAACAAGGAAAGAAATT 1155
||| ||||||||||||||| ||||| ||||||||||| ||||||||||||||| ||| ||
Sbjct 1131 GTGCAATGTGTTTATCTATGTGCCCTCTTAATGCAATATTTGTAAACAAGGAA-GAAGTT 1189
Query 1156 CCCAAAAGG-GATTTATTTGCAAATTGTTAATCTGTTTATTACAAA---ATTACA-ATCA 1210
|| ||| || || ||||||||||||| | | | ||||| ||| |||||| ||||
Sbjct 1190 CC-AAA-GGAGAATTATTTGCAAATTATGA-T--GTTTA--ACATGTTTATTACAGATCA 1242
Query 1211 AAGATGTTTAACATGGA 1227
|||||||||||||||||
Sbjct 1243 AAGATGTTTAACATGGA 1259
> AT2G45960.3 | Symbols: PIP1B, TMP-A, ATHH2, PIP1;2 | plasma membrane
intrinsic protein 1B | chr2:18910295-18911982 FORWARD
LENGTH=1299
Length=1299
Score = 1013 bits (548), Expect = 0.0
Identities = 763/868 (88%), Gaps = 10/868 (1%)
Strand=Plus/Plus
Query 178 ATGGAAGGCAAAGAAGAAGACGTTAGAGTTGGAGCTAACAAGTTCCCGGAGAGACAACCA 237
|||||||| ||||||||||| |||||||| |||||||||||||| |||||||| |||||
Sbjct 156 ATGGAAGGTAAAGAAGAAGATGTTAGAGTCGGAGCTAACAAGTTTCCGGAGAGGCAACCG 215
Query 238 ATCGGAACATCAGCTCAGAGCGACAAGGACTACAATGAACCACCACCGGCTCCGTTTTTC 297
|||||||| || |||||||| |||||||||||||| || |||||||| || ||||| |||
Sbjct 216 ATCGGAACTTCGGCTCAGAGTGACAAGGACTACAAAGAGCCACCACCTGCGCCGTTGTTC 275
Query 298 GAGCCTGGTGAGCTTTCTTCATGGTCCTTTTGGAGAGCTGGGATCGCTGAGTTCATCGCT 357
||||| || ||||| ||||||||||||| |||||||||||||| |||||||| || |||
Sbjct 276 GAGCCCGGCGAGCTAGCTTCATGGTCCTTCTGGAGAGCTGGGATTGCTGAGTTTATAGCT 335
Query 358 AC-TTTCCTCTTCCTCTACATCACTGTTTTGACTGTTATGGGAGTTAAAAGGTCACCGAA 416
|| ||| | ||||| |||||||||||||||||||||||||| || || |||||||||||
Sbjct 336 ACGTTT-TTGTTCCTGTACATCACTGTTTTGACTGTTATGGGTGTGAAGAGGTCACCGAA 394
Query 417 TATGTGTGCTTCCGTCGGAATCCAAGGAATCGCTTGGGCTTTCGGTGGTATGATCTTTGC 476
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
Sbjct 395 CATGTGTGCTTCCGTCGGAATCCAAGGTATCGCTTGGGCTTTCGGTGGTATGATCTTCG- 453
Query 477 CT-TAGTCTACTGCACCGCTGGTATCTCCGGTGGACACATCAACCCGGCGGTTACTTTTG 535
|| | ||||||||||||||||||||||||||||||||||||||||| |||||||| || |
Sbjct 454 CTCTCGTCTACTGCACCGCTGGTATCTCCGGTGGACACATCAACCCAGCGGTTACGTTCG 513
Query 536 GTCTGTTCTTAGCCCGGAAGCTGTCGCTTAC-CAGAGCTCTGTACTACATAGTGATGCAG 594
|| |||||||||| ||||||| ||||| || | ||||| ||||||||||||||||||||
Sbjct 514 GTTTGTTCTTAGCTAGGAAGCTTTCGCTCACAC-GAGCTGTGTACTACATAGTGATGCAG 572
Query 595 TGCTTGGGAGCCATCTGTGGTGCTGGCGTGGTCAAAGGATTCCAGCCTAAGCAATACCAG 654
||||| ||||| |||||||| ||||| |||||||| || |||||||| ||||||||||||
Sbjct 573 TGCTTAGGAGCTATCTGTGGAGCTGGTGTGGTCAAGGGGTTCCAGCCAAAGCAATACCAG 632
Query 655 GCTCTAGGAGGAGGAGCTAACACTGTGGCTCATGGTTACACCAAAGGAAGTGGTCTTGGA 714
||| | ||||| ||||| ||||| | |||||||| ||||||||||||||||||||||||
Sbjct 633 GCTTTGGGAGGTGGAGCCAACACCATAGCTCATGGCTACACCAAAGGAAGTGGTCTTGGA 692
Query 715 GCTGAGATTATTGGCACTTTTGTCCTTGTATACACAGTCTTCTCAGCAACTGACGCCAAG 774
|||||||||||||| || ||||||||||| ||||| |||||||| || ||||| ||||||
Sbjct 693 GCTGAGATTATTGGAACCTTTGTCCTTGTTTACACCGTCTTCTCTGCCACTGATGCCAAG 752
Query 775 AGAAACGCTCGTGACTCTCATGTCCCTATTCTTGCACCACTCCCAATCGGGTTTGCGGTT 834
||||||||||||||||||||||| |||||||| ||||| ||||| ||||| || || ||
Sbjct 753 AGAAACGCTCGTGACTCTCATGTTCCTATTCTAGCACCGCTCCCTATCGGATTCGCTGTG 812
Query 835 TTCTTGGTTCACTTGGCAACCATCCCAATCACTGGCACAGGCATCAACCCAGCTAGAAGT 894
|||||||||||||| ||||||||||| || ||||| || || ||||||||||| ||||||
Sbjct 813 TTCTTGGTTCACTTAGCAACCATCCCCATTACTGGAACTGGAATCAACCCAGCAAGAAGT 872
Query 895 CTTGGAGCTGCAATCATCTACAACAAAGACCATTCATGGGACGACCAC-TG--GG-TGTT 950
||||||||||||||||||| |||||| ||| | | ||||| |||||| || || | ||
Sbjct 873 CTTGGAGCTGCAATCATCTTCAACAAGGACAACGCTTGGGATGACCACGTGATGGGTCTT 932
Query 951 TTGGGTTGGACCCTTCATTGGAGCTGCACTTGCTGCTCTTTACCATGTGGTTGTCATCAG 1010
|||||||||||| |||||||| ||||||||||||||||| ||||| || | ||||||||
Sbjct 933 TTGGGTTGGACCATTCATTGGTGCTGCACTTGCTGCTCTCTACCACGTTATAGTCATCAG 992
Query 1011 AGCCATCCCTTTCAAATCCAGAAGCTAA 1038
||||||||| ||||| ||||||||||||
Sbjct 993 AGCCATCCCATTCAAGTCCAGAAGCTAA 1020
> AT1G01620.1 | Symbols: PIP1C, TMP-B, PIP1;3 | plasma membrane
intrinsic protein 1C | chr1:225665-227302 REVERSE LENGTH=1308
Length=1308
Score = 726 bits (393), Expect = 0.0
Identities = 708/862 (82%), Gaps = 14/862 (2%)
Strand=Plus/Plus
Query 178 ATGGAAGGCAAAGAAGAAGACGTTAGAGTTGGAGCTAACAAGTTCCCGGAGAGACAACCA 237
|||||||| |||||||| || ||| |||| ||||||||||||||||||||||| |||||
Sbjct 127 ATGGAAGGGAAAGAAGAGGATGTTCGAGTGGGAGCTAACAAGTTCCCGGAGAGGCAACCG 186
Query 238 ATCGGAACATCAGCTCAGAGC-GACAAGGACTACAATGAACCACCACCGGCTCCGTTTTT 296
|| || ||||| ||||||| | ||||| |||||||| || |||||||| ||||| |||||
Sbjct 187 ATAGGTACATCGGCTCAGA-CGGACAAAGACTACAAGGAGCCACCACCAGCTCCATTTTT 245
Query 297 CGAGCCTGGTGAGCTTTCTTCATGGTCCTTTTGGAGAGCTGGGATCGCTGAGTTCATCGC 356
|||||| || ||||| ||| |||||||| | ||||| || ||||| |||||||| ||
Sbjct 246 CGAGCCAGGCGAGCTGAGTTCGTGGTCCTTCTACAGAGCCGGAATCGCCGAGTTCATAGC 305
Query 357 TACTTTCCTCTTCCTCTACATCACTGTTTTGACTGTTATGGGAGTTAAAAG-GTCACCGA 415
|| ||||| || || ||||| || || ||||| || |||||||| || || | |||| |
Sbjct 306 CACCTTCCTGTTTCTATACATAACAGTATTGACAGTGATGGGAGTGAAGAGAG-CACCAA 364
Query 416 ATATGTGTGCTTCCGTCGGAATCCAAGGAATCGCTTGGGCTTTCGGTGGTATGATCTTTG 475
| |||||||| || || ||||||||||| || ||||||||||||||||| ||||||||||
Sbjct 365 ACATGTGTGCCTCTGTTGGAATCCAAGGCATTGCTTGGGCTTTCGGTGGCATGATCTTTG 424
Query 476 -CCTTAGTCTACTGCACCGCTGGTATCTCCGGTGGACACATCAACCCGGCGGTTACTTTT 534
|||| |||||||| || ||||| ||||| ||||| ||||| ||||| ||||| || |||
Sbjct 425 CCCTT-GTCTACTGTACTGCTGGAATCTCTGGTGGGCACATAAACCCAGCGGTGACATTT 483
Query 535 GGTCTGTTCTTAGCCCGGAAGCTGTCGCTT-ACCAGAGCTCTGTACTACATAGTGATGCA 593
||||||||||| || || |||||||| || || |||||| | | ||||| ||||||||
Sbjct 484 GGTCTGTTCTTGGCTCGTAAGCTGTC-ATTGACGAGAGCTGTCTTTTACATCGTGATGCA 542
Query 594 GTGCT-TGGGAGCCATCTGTGGTGCTGGCGTGGTCAAAGGATTCCAGCCTAAGCAATACC 652
|| | | ||||||||||| || || || || |||||||| |||||||| || | ||||
Sbjct 543 ATG-TCTCGGAGCCATCTGCGGCGCCGGAGTTGTCAAAGGCTTCCAGCCAAATCCTTACC 601
Query 653 AGGCTCTAGGAGGAGGAGCTAACACTGTGGCTCATGGTTACACCAAAGGAAGTGGTCTT- 711
| |||| || |||||||| ||||| || ||||| || ||||| || || |||| ||
Sbjct 602 AAACTCTCGGCGGAGGAGCCAACACAGTCGCTCACGGCTACACTAAGGGCTCTGGT-TTG 660
Query 712 GGAGCTGAGATTATTGGCACTTTTGTCCTTGTATACACAGTCTTCTCAGCAACTGACGCC 771
|| |||||||| || || || || |||||||| ||||| |||||||| || |||||||||
Sbjct 661 GGTGCTGAGATAATCGGAACCTTCGTCCTTGTCTACACGGTCTTCTCCGCCACTGACGCC 720
Query 772 AAGAGAAACGCTCGTGACTCTCATGTCCCTATTCTT-GCACCACTCCCAATCGGGTTTGC 830
||||||| |||||||||||| || || || ||| || ||||||||||||||||| || ||
Sbjct 721 AAGAGAAGCGCTCGTGACTCCCACGTTCCGATT-TTGGCACCACTCCCAATCGGATTCGC 779
Query 831 GGTTTTCTTGGTTCACTTGGCAACCATCCCAATCACTGGCACAGGCATCAACCCAGCTAG 890
|| ||||||||||||||||| || || |||||||| || ||||| || |||||||||||
Sbjct 780 TGTGTTCTTGGTTCACTTGGCGACGATTCCAATCACCGGAACAGGAATTAACCCAGCTAG 839
Query 891 AAGTCTTGGAGCTGCAATCATCTACAACAAAGACCATTCATGGGACGACCACTGGGTGTT 950
||||||||||||||||||||||||||||| ||||| | ||||||||||||||| | ||
Sbjct 840 GAGTCTTGGAGCTGCAATCATCTACAACAAGGACCACGCTTGGGACGACCACTGGATATT 899
Query 951 TTGGGTTGGACCCTTCATTGGAGCTGCACTTGCTGCTCTTTACCATGTGGTTGTCATCAG 1010
||||| ||||| ||||||||||| || ||||| ||||||||||| ||||||||||
Sbjct 900 CTGGGTCGGACCATTCATTGGAGCAGCTCTTGCGGCTCTTTACCACCAACTTGTCATCAG 959
Query 1011 AGCCATCCCTTTCAAATCCAGA 1032
|||||| || ||||| ||||||
Sbjct 960 AGCCATTCCATTCAAGTCCAGA 981
> AT4G35100.1 | Symbols: PIP3, PIP3A, PIP2;7, SIMIP | plasma membrane
intrinsic protein 3 | chr4:16708598-16710248 FORWARD
LENGTH=1207
Length=1207
Score = 350 bits (189), Expect = 2e-95
Identities = 556/728 (76%), Gaps = 45/728 (6%)
Strand=Plus/Plus
Query 280 CCACCGGCTCCGT-TTTTCGAGCCT-GGTGAGCTTTCTTCATGGTCCTTT-TGGAGAGCT 336
||||| ||||| | || |||| | | |||||||| || |||| |||| | ||||||
Sbjct 135 CCACCAGCTCC-TCTTCTCGA-CATGGGTGAGCTCAAATCCTGGT-CTTTCTACAGAGCT 191
Query 337 GGGATCGCTGAGTTCATCGCTACTTTCCTCTTCCTCTACATCACTGT-TTTGACTGTTAT 395
|||||||||||||||||||| |||||||||||||| |||| || | ||||| ||
Sbjct 192 CTCATCGCTGAGTTCATCGCTACACTCCTCTTCCTCTACGTCACCGTCGCT-ACTGTCAT 250
Query 396 GGGAGTTAA-AAGGTCACCGAAT-ATGTGTG-CTTCCGTCGGAATCCAAGGAATCGCTTG 452
|| || ||| |||| | | |||| | ||| || | | || ||||||||
Sbjct 251 CGGCCACAAGAAGCAAACCG-GTCCT-TGTGAC-GGCGTTGGTTTACTTGGTATCGCTTG 307
Query 453 GGCTTTCGGTGGTATGATCTTTG-CCTTAGTCTACTGCACCGCTGGTATCTCCGGTGGAC 511
||||||||||||||||||||| | ||| |||||||||||||| |||||||| ||||| |
Sbjct 308 GGCTTTCGGTGGTATGATCTTCGTCCTC-GTCTACTGCACCGCCGGTATCTCTGGTGGTC 366
Query 512 ACATCAACCCGGCGGTTACTTTTGGTCTGTTCTTAGCCCGGAAGCTGTCGCTTACCAG-- 569
|||| ||||| || || ||||| ||||||||||| ||||| ||| ||| ||| |
Sbjct 367 ACATTAACCCAGCTGTGACTTTCGGTCTGTTCTTGGCCCGTAAG--GTCTCTTTGGTGCG 424
Query 570 AGCTCTGTACT-ACAT-AGT-GATGCAGTG-CTTGGGAGCCATCTGTGGTGCTGGCGTG- 624
|||||| | | |||| | | | | ||||| ||||| |||||| ||||||| ||| ||
Sbjct 425 AGCTCT-TGGTTACATGA-TAGCT-CAGTGTCTTGG-AGCCATTTGTGGTG-TGG-GTTT 478
Query 625 -GTCAAAGGATTCCA-GCCTAAG-CAATACCAGGCTCTAGGAGGAGGAGCTAACACTGTG 681
|| |||| ||| | | || | ||| | |||| || |||||||||||||| ||
Sbjct 479 CGTGAAAGCTTTC-ATGAA-AACTCCTTACAACACTCTTGGTGGAGGAGCTAACACCGTA 536
Query 682 GCTCATGGTTACACCAAAGGAAGTGGTCTTGGAGCTGAGATTATTGGCACTTTTGTCCTT 741
||| | ||||||| |||||||| || ||| ||||||||||||||||| ||||| ||||||
Sbjct 537 GCTGACGGTTACAGCAAAGGAACTGCTCTCGGAGCTGAGATTATTGGAACTTTCGTCCTT 596
Query 742 GTATACACAGTCTTCTCAGCAACTGACGCC-AAGAGAAACGCTCGTGACTCTCATGTCCC 800
|| ||||| || ||||| ||||||||| || ||||||| ||||||||||||||| ||||
Sbjct 597 GTTTACACCGTTTTCTCTGCAACTGAC-CCTAAGAGAAGCGCTCGTGACTCTCACATCCC 655
Query 801 TATTCTTG-CACCACTCCCAATCGGGTTTGCGGTTTTCTTGGTTCACTTGGCAACCATCC 859
|| ||| | ||||| ||||| || ||||| || ||| |||| || ||||| || ||||
Sbjct 656 CGTT-TTGGCTCCACTTCCAATTGGATTTGCTGTGTTCATGGTGCATTTGGCTACTATCC 714
Query 860 CAATCACTGGCACAGGCATCAACCCAGCTAGAAGTCTT-GGAGCTGCAATCATCTACAAC 918
| || ||||| || || ||||||||||||||||| ||| || ||||| | |||||||||
Sbjct 715 CCATTACTGGAACTGGTATCAACCCAGCTAGAAG-CTTTGGTGCTGCTGTTATCTACAAC 773
Query 919 AAAGACCATTCATGGGACGACCACTGGGTGTTTTGGGTTGGACCCTTCATTGGAGCTGCA 978
|| || | | ||||| ||||| ||| | ||||||||||| || ||| |||| | |||
Sbjct 774 AACGAGAAGGCGTGGGATGACCAATGGATCTTTTGGGTTGGTCCGTTC-TTGG-GA-GCA 830
Query 979 CTTGCTGC 986
|| |||||
Sbjct 831 CTAGCTGC 838
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 60290854545
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5