BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg486731 Length=1365 Score E Sequences producing significant alignments: (Bits) Value AT3G62260.2 | Symbols: | Protein phosphatase 2C family protein... 2036 0.0 > AT3G62260.2 | Symbols: | Protein phosphatase 2C family protein | chr3:23038290-23040570 REVERSE LENGTH=1560 Length=1560 Score = 2036 bits (1102), Expect = 0.0 Identities = 1264/1342 (94%), Gaps = 12/1342 (1%) Strand=Plus/Plus Query 1 CGAGAGGAATAAAATCACACGCGAACTTCGATAATTGTCAATTTTCGTTGAACACAAGTG 60 ||||||||||||| ||||||||||||||||||| |||| ||||||||||||||||||||| Sbjct 1 CGAGAGGAATAAATTCACACGCGAACTTCGATAGTTGTTAATTTTCGTTGAACACAAGTG 60 Query 61 ACGAATTTGAGAGAG-----AGAA-AAAATCAGAGATAAAGAATTTGAGTTTCTGGGAAT 114 ||||||||||||||| | || ||||||||||||||||||||||||||||| ||||| Sbjct 61 ACGAATTTGAGAGAGAAAAAAAAAGAAAATCAGAGATAAAGAATTTGAGTTTCTTGGAAT 120 Query 115 TAAAAGATCGATTTTGTTGTAGTGAAATTGAAATTGAAATTGATTGTGAagagagagaga 174 |||| |||||| || |||| || || |||||||||||||||||||||| ||||| ||| Sbjct 121 TAAAGGATCGA--TT-TTGT--TG-AAGTGAAATTGAAATTGATTGTGAAAAGAGAAAGA 174 Query 175 gaCAGATGGTAGCAGAAGCAGAGGTTGTGTTTCAACAGAGTTTGCCGGCGGTTCTGGAGA 234 ||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 175 GACTGATGGTAGCAGAAGCAGAGGTTGTGTTTCAACAGAGTTTACCGGCGGTTCTGGAGA 234 Query 235 TTGAGTTGTTTGATGGAGTTTCTTCCGCCGTTAAATCTCCCGTTTCTTCTCCCAAATTGG 294 ||||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||||| Sbjct 235 TTGAGTTGTTTGACGGAGTTTCCTCCGCCGTTAAATCTCCCGTTTCTTCTCCGAAATTGG 294 Query 295 GTTTTTGTCAGTCAACGGCGTCGGTTTCCAGCAGTTTAACGACTTCTCCTGTGCAGGCTG 354 ||||| |||||||||||||||||||||| | |||||||||||||||||||||||||||| Sbjct 295 GTTTTACTCAGTCAACGGCGTCGGTTTCCGGAAGTTTAACGACTTCTCCTGTGCAGGCTG 354 Query 355 ATATCTTTCCAGAGGGTGATTGCGATCCCAGTGTCTCGGATTATGTTCCGACCATCCGGT 414 |||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||| Sbjct 355 ATATCTTTCCAGAGGGTGATTGCGATCCTAGTGTCTTGGATTATATTCCGACCATCCGGT 414 Query 415 CTGGAAGCTTCGCTGATATTGGTCCAAAGAGAAACATGGAAGATGAACACATTCGCATAG 474 |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 415 CTGGAAGCTTTGCTGATATTGGGCCAAAGAGAAACATGGAAGATGAACACATTCGCATAG 474 Query 475 ACGATCTATCTTCTCAAGTTGGTTCTCTCTTTGAGTTGCCAAAGCCAAGTGCTTTCTATG 534 ||||| ||||||||||||||||||| || ||||||||||| ||||| ||||||||||||| Sbjct 475 ACGATTTATCTTCTCAAGTTGGTTCCCTTTTTGAGTTGCCGAAGCCTAGTGCTTTCTATG 534 Query 535 CGGTTTTTGACGGGCATGGAGGACCAGAAGCAGCAGCATACGTACGGGAAAATGCCATTA 594 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 535 CGGTTTTTGACGGGCATGGAGGACCAGAAGCAGCAGCATACGTACGGGAAAATGCCATTA 594 Query 595 GGTTTTTCTTTGAAGATGAGCAGTTTCCACAAACATCGCAAGTGAGTAGTGTTTATGTGG 654 ||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| Sbjct 595 GGTTTTTCTTTGAAGATGAGCAGTTTCCACAGACATCGGAAGTGAGTAGTGTTTATGTGG 654 Query 655 AAGAAGTTGAGACTTCATTGAGAAATGCGTTTCTTCAAGCTGATCTAGCTTTGGCAGAGG 714 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 655 AAGAAGTTGAGACTTCATTGAGAAATGCGTTTCTTCAAGCTGATCTAGCTTTGGCAGAGG 714 Query 715 ATTGCAGTATCAGCTCTTCTTGTGGAACCACTGCTCTTACTGCTCTTATTTGTGGAAGTC 774 |||||||||||||| ||||||||| ||||| ||||| |||||||||||||||||||| | Sbjct 715 ATTGCAGTATCAGCGATTCTTGTGGTACCACCGCTCTGACTGCTCTTATTTGTGGAAGAC 774 Query 775 TCTTAATGGTTGCAAATGCCGGAGACTGCAGAGCGGTTTTATGCAGGAAAGGCAAAGCGA 834 |||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| Sbjct 775 TCTTAATGGTTGCAAATGCCGGAGACTGCAGAGCGGTTCTATGCAGGAAAGGCAGAGCGA 834 Query 835 TAGACATGTCTGAAGACCATAAACCGATTAATCTACTCGAGAGAAGAAGAGTGGAAGAAT 894 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct 835 TAGACATGTCTGAAGACCATAAACCGATTAATCTACTTGAGAGAAGAAGAGTGGAGGAAT 894 Query 895 CCGGCGGTTTCATCAATAATGACGGTTACCTAAATGAAGTCCTAGCTGTGACCCGAGCTC 954 ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| Sbjct 895 CCGGCGGTTTCATCACTAATGACGGTTACCTAAATGAAGTCCTAGCTGTAACCCGAGCTC 954 Query 955 TCGGTGACTGGGATTTAAAACTGCCACATGGCTCTCAGTCTCCGCTAATTTCGGAACCAG 1014 | || ||||||||||||||||||||||| |||||||| ||||| || || |||||||||| Sbjct 955 TGGGCGACTGGGATTTAAAACTGCCACACGGCTCTCAATCTCCACTGATCTCGGAACCAG 1014 Query 1015 AAATCAAGCAGATAACTTTAAGTGAAGACGATGAGTTCCTTGTGATCGGATGCGATGGGA 1074 ||||||||||||||||| ||| ||||||||||||||| |||||||| || |||||||||| Sbjct 1015 AAATCAAGCAGATAACTCTAACTGAAGACGATGAGTTTCTTGTGATTGGGTGCGATGGGA 1074 Query 1075 TTTGGGATGTCTTGACGAGCCAAGAAGCAGTTAGCATTGTTAGACGTGGCTTAAACCGGC 1134 |||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| Sbjct 1075 TTTGGGATGTCTTGACGAGCCAAGAAGCGGTTAGCATTGTTAGGCGTGGCTTAAACCGGC 1134 Query 1135 ACAACGATCCAACAAGATGTGCGCGAGAGCTTGTGATGGAGGCTCTGAGCCGGAACTCAT 1194 ||||||||||||||||||||||||||||||| ||||||||||||||| | |||||||||| Sbjct 1135 ACAACGATCCAACAAGATGTGCGCGAGAGCTAGTGATGGAGGCTCTGGGGCGGAACTCAT 1194 Query 1195 TTGATAATTTAACCGCGGTGGTGGTATGTTTCATGACAGTGGACAGAGGAGACAAGCCGG 1254 ||||||||||||| |||||||||||||||||||||||| |||||||||| |||||||||| Sbjct 1195 TTGATAATTTAACTGCGGTGGTGGTATGTTTCATGACAATGGACAGAGGGGACAAGCCGG 1254 Query 1255 TGGTGCCATTGGAGAAGAGAAGATGTTTTAGTCTTTCGCCAGAAGCTTTCTGCAGCTTGA 1314 |||||||||||||||||||||| ||||||||||||||||| ||||||||||| ||||||| Sbjct 1255 TGGTGCCATTGGAGAAGAGAAGGTGTTTTAGTCTTTCGCCTGAAGCTTTCTGTAGCTTGA 1314 Query 1315 GGAACCTGTTGGATGGCTGAAA 1336 |||| ||||||||||||||||| Sbjct 1315 GGAATCTGTTGGATGGCTGAAA 1336 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 67218529755 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5