BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg486786 Length=1658 Score E Sequences producing significant alignments: (Bits) Value AT3G62830.1 | Symbols: UXS2, ATUXS2, AUD1 | NAD(P)-binding Ross... 2499 0.0 AT2G47650.2 | Symbols: UXS4 | UDP-xylose synthase 4 | chr2:1953... 1155 0.0 > AT3G62830.1 | Symbols: UXS2, ATUXS2, AUD1 | NAD(P)-binding Rossmann-fold superfamily protein | chr3:23232386-23235567 FORWARD LENGTH=1705 Length=1705 Score = 2499 bits (1353), Expect = 0.0 Identities = 1511/1586 (95%), Gaps = 16/1586 (1%) Strand=Plus/Plus Query 80 TTTTC-ACTCTCTCG-TTCAAGTTCTCGAATTCAATTT-TGAGGTTTGGAGATGGCGAGC 136 ||||| | ||| ||| ||| || ||| ||||||||||| ||||||||||||||||||||| Sbjct 104 TTTTCTA-TCTTTCGATTCTAGATCTAGAATTCAATTTGTGAGGTTTGGAGATGGCGAGC 162 Query 137 GAGCTGATCAATCGGCGACACGAGGCGGATCAACCAATCGCCGATGCTTATTACCCGAAA 196 |||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||| Sbjct 163 GAGCTGATCAATCGGCGACACGAGACGGATCAACCAACCGCCGATGCTTATTACCCGAAA 222 Query 197 CCAATCAAACCATGGTTCATGGTGACTCGTCCGATGCGTTACATGCTCCGTGAACAGAGA 256 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 223 CCAATCAAACCATGGTTCACGGTGACTCGTCCGATGCGTTACATGCTCCGTGAACAGAGA 282 Query 257 CTTATCTTCGTTCTCGTTGGCATTGCAATCGCTACTTTGGTTTTCACAATTTTCCCTCGC 316 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 283 CTTATCTTCGTTCTCGTTGGCATTGCAATCGCTACTTTGGTTTTCACAATTTTCCCTCGC 342 Query 317 TCCACCCAATCAAGCGCTTACTCGGATCCGTTCTCCGGTTACGGAATCAGACCCGACGAA 376 ||||| ||||||| | ||||||||||||| |||||||||||||||||| ||||||||||| Sbjct 343 TCCACACAATCAACCCCTTACTCGGATCCTTTCTCCGGTTACGGAATCCGACCCGACGAA 402 Query 377 TCGTACGTTCCGGCGATACAAGCTCAGAGGAAACCTAGCCTCGAGTACCTGAACCGGATC 436 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 403 TCGTACGTTCCGGCTATACAAGCTCAGAGGAAACCTAGCCTCGAGTACCTGAACCGGATC 462 Query 437 GGAGCAACAGGCGGGAAAATCCCACTCGGATTGAAACGCAAAGGGCTAAGAGTCGTCGTC 496 |||||||||||||||||||||||||| |||||||||||||||||||||||||| || || Sbjct 463 GGAGCAACAGGCGGGAAAATCCCACTGGGATTGAAACGCAAAGGGCTAAGAGTGGTTGTG 522 Query 497 ACCGGTGGTGCTGGATTCGTTGGATCGCATCTTGTGGATCGTTTGATGGCGAGAGGAGAC 556 |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| Sbjct 523 ACCGGTGGTGCTGGATTCGTTGGATCGCATCTCGTGGATCGTTTGATGGCTAGAGGAGAT 582 Query 557 ACTGTGATCGTTGTTGACAATTTCTTCACTGGAAGGAAAGAGAACGTTATGCACCATTTC 616 |||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 583 ACTGTGATTGTTGTTGATAATTTCTTCACTGGAAGGAAAGAGAACGTTATGCACCATTTC 642 Query 617 AGTAACCCTAATTTTGA-ACTTATCCGTCACGATGTTGTTGAGCCGATTCTTCTTGAGGT 675 ||||||||||| ||||| | | |||||||||||||| ||||||||||||||||||||||| Sbjct 643 AGTAACCCTAACTTTGAGA-TGATCCGTCACGATGTGGTTGAGCCGATTCTTCTTGAGGT 701 Query 676 TGATCAGATCTATCATCTGGCTTGCCCTGCCTCTCCTGTTCATTACAAATTCAATCCCGT 735 |||||||||||| ||| ||||||||||||| ||||||||||||||||||||||||||||| Sbjct 702 TGATCAGATCTACCATTTGGCTTGCCCTGCTTCTCCTGTTCATTACAAATTCAATCCCGT 761 Query 736 CAAGACTATCAAGACGAATGTGGTTGGAACACTGAACATGCTTGGTTTGGCTAAGCGAGT 795 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 762 CAAGACTATCAAGACGAATGTGGTTGGAACATTGAACATGCTTGGTTTGGCTAAGCGAGT 821 Query 796 CGGTGCTAGATTTCTTCTGACGAGTACCAGTGAGGTCTATGGGGATCCTCTGCAGCATCC 855 || |||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| Sbjct 822 TGGGGCTAGATTTCTTCTGACGAGTACCAGTGAGGTTTATGGTGATCCTCTGCAGCATCC 881 Query 856 TCAGGTCGAGACTTACTGGGGCAACGTTAATCCAATTGGTGTTCGTAGTTGCTACGATGA 915 |||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 882 TCAGGTTGAGACTTACTGGGGCAACGTTAATCCCATTGGTGTTCGTAGTTGCTACGATGA 941 Query 916 AGGAAAACGTACGGCAGAGACGTTGACCATGGACTATCACAGAGGTGCCAATGTTGAGGT 975 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 942 AGGAAAACGTACGGCAGAGACGTTGACCATGGACTATCACCGAGGTGCCAATGTTGAGGT 1001 Query 976 CAGGATTGCTAGGATCTTCAACACCTATGGTCCAAGAATGTGTATAGATGATGGGCGTGT 1035 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1002 CAGAATTGCTAGGATCTTCAACACCTATGGTCCAAGAATGTGTATAGATGATGGGCGTGT 1061 Query 1036 TGTCAGCAACTTCGTTGCACAGGCACTAAGGAAAGAACCATTGACTGTTTACGGTGATGG 1095 ||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 1062 TGTTAGTAACTTCGTTGCACAGGCACTAAGGAAAGAGCCATTGACTGTTTACGGTGATGG 1121 Query 1096 GAAGCAGACAAGGAGTTTCCAATTTGTTTCTGATCTGGTTGAAGGTTTGATGAGATTGAT 1155 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 1122 GAAGCAGACAAGGAGTTTCCAATTTGTTTCTGATCTGGTTGAAGGTTTGATGAGACTGAT 1181 Query 1156 GGAAGGAGAACATGTCGGGCCATTTAACCTCGGTAACCCTGGTGAATTCACAATGCTCGA 1215 |||||||||||||||||| ||||| |||||||||||||||||||||||||| |||||||| Sbjct 1182 GGAAGGAGAACATGTCGGCCCATTCAACCTCGGTAACCCTGGTGAATTCACGATGCTCGA 1241 Query 1216 GCTCGCTAAGGTGGTCCAAGAGACGATTGATCAAAACGCAAACATAGAGTTCAGACCAAA 1275 |||||||||||||||||||||||| ||||||| || ||||||||||||||||||||||| Sbjct 1242 GCTCGCTAAGGTGGTCCAAGAGACAATTGATCCGAATGCAAACATAGAGTTCAGACCAAA 1301 Query 1276 CACAGAAGACGACCCTCACAAGAGAAAGCCTGACATCACAAAGGCCAAAGAGCTTTTAGG 1335 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1302 CACAGAAGACGACCCTCACAAGAGAAAGCCTGACATCACAAAGGCCAAAGAGCTTTTAGG 1361 Query 1336 TTGGGAACCAAAGGTCTCTCTTCGTCAGGGACTGCCTCTCATGGTCAAAGATTTCCGTCA 1395 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1362 TTGGGAACCAAAGGTCTCTCTTCGTCAGGGACTGCCTCTCATGGTCAAAGATTTCCGTCA 1421 Query 1396 ACGTGTCTTTGGTGACCAGAGAG-AAGGCTCCTCCGCAGCTGCAACCACCACCAAGACAA 1454 |||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| Sbjct 1422 ACGTGTCTTTGGTGACCAGA-AGGAAGGCTCCTCCGCAGCTGCAACCACCACCAAGACAA 1480 Query 1455 CTTCAGCTTGAGCAAATGCAGAATC-GAGTAGCAGCCACTGCGGCTGGTAGTGGGTTGAT 1513 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| || Sbjct 1481 CTTCAGCTTGAGCAAATGCAGAATCTGAGTAGCAGCCACTGCGGCTGGTAGTGGGTTTAT 1540 Query 1514 AACAAAAATGCAAGACCTT-GCTTCGTTTCTATTTATTTCGTTTTTGATTTCTGTTTTGA 1572 ||||||| ||||||| | | | ||| ||| |||||||||| |||||||||||||||||| Sbjct 1541 AACAAAATTGCAAGAGCGTCGTTTC-TTTAAATTTATTTCGCTTTTGATTTCTGTTTTGA 1599 Query 1573 TAATCGTGTAAAATTAGAGTAAGAATTTGGTACCTTTACTTACTACTACTATTCATGAAC 1632 |||||||||||| |||||||||||||||||||||||||||||||||| | | |||| || Sbjct 1600 TAATCGTGTAAACGTAGAGTAAGAATTTGGTACCTTTACTTACTACTA-T-T-CATGGAC 1656 Query 1633 CTCTCACTACAGTTTTAAAAGAAAAA 1658 ||| ||||||||||||||||||||| Sbjct 1657 CTC--ACTACAGTTTTAAAAGAAAAA 1680 > AT2G47650.2 | Symbols: UXS4 | UDP-xylose synthase 4 | chr2:19538610-19541473 REVERSE LENGTH=1600 Length=1600 Score = 1155 bits (625), Expect = 0.0 Identities = 1109/1334 (83%), Gaps = 68/1334 (5%) Strand=Plus/Plus Query 126 AGATGGCGAGC-GAGCTGATC-AATCGGCGACACGAGGCGGATCAACCA-ATCGCCG-AT 181 |||||||| | ||||||| | || |||||||||||| || |||||| | || | || Sbjct 108 AGATGGCG-TCTGAGCTGA-CAAACCGGCGACACGAGATAGAGCAACCAGA-AGCGGAAT 164 Query 182 GCTTATTACCCGAAA-CCAATCAAA-CCATGGTTCATGGTGACTCGTCCGATGCGTTACA 239 ||||||| || ||| || || ||| ||||||||| | | || ||||||||| ||||||| Sbjct 165 -CTTATTATCC-AAAGCCGAT-AAAGCCATGGTTCGTAGCGATTCGTCCGATCCGTTACA 221 Query 240 TGCTCCGTGAACAGAGACTTATCTTCGTTCTCGTTGGCATTGCAATCGCTAC-TTTGGTT 298 ||||| | ||||||||||| ||||||| ||||| |||||||| ||||| || || || Sbjct 222 TGCTCAGAGAACAGAGACTCGTCTTCGTCCTCGTCGGCATTGCCATCGCCACATTAGG-A 280 Query 299 TTCACAAT-TT-TCC--CTCGCTCC-A-C-CCAATCAA-GCGCTTAC-TC--GGATCCG- 346 |||||||| || ||| || ||| | | |||| ||| | ||||| | ||||||| Sbjct 281 TTCACAATCTTCTCCAAATC-ATCCAACCACCAACCAATTC-CTTACGACGTGGATCCGC 338 Query 347 TTCTCCGGTTACGGAAT-CAGACCCGACG-AATCGTA-CGTTCCGGCGATACAAGCTCAG 403 || ||||| |||||||| | || | || | |||||| | | || ||| || | ||| Sbjct 339 TT-TCCGGATACGGAATGC-GATCGGA-GTCATCGTATC-TGCCAGCG--ACGA-TTCAT 391 Query 404 AGGAAACCTAGCCTCGAGTACCTGAACCGGATCGGAGCAACAGGCGGGAAAATCCCACTC 463 | ||| || ||| |||||||| ||| |||||||||| | ||||||| |||||||| || Sbjct 392 AAGAAGCCAAGCATCGAGTACATGAGCCGGATCGGATCGGCAGGCGGCAAAATCCCTCTA 451 Query 464 GGATTGAAACGCAAAGGGCTAAGAGTCGTCGTCACCGGTGGTGCTGGATTCGTTGGATCG 523 || |||||||| |||| |||||| || || || || ||||| || || ||||| || || Sbjct 452 GGCTTGAAACGGAAAGTGCTAAGGGTTGTTGTGACAGGTGGAGCAGGGTTCGTCGGGTCA 511 Query 524 CATCTTGTGGATCGTTTGATGGCGAGAGGAGAC-ACTGTGATCGTTGTTGACAATTTCTT 582 || || ||||| || |||||||| |||||||| || |||||||| || ||||||||||| Sbjct 512 CACCTGGTGGACCGGTTGATGGCTCGAGGAGACAAC-GTGATCGTGGTCGACAATTTCTT 570 Query 583 CACTGGAAGGAAAGAGAACGTTATGCACCATTTCAGTAACCCTAATTTTGA-ACTTATCC 641 ||| ||||||||||||||||| ||||||||||||| |||||||||||| || | | |||| Sbjct 571 CACGGGAAGGAAAGAGAACGTGATGCACCATTTCAATAACCCTAATTTCGAGA-TGATCC 629 Query 642 GTCACGATGTTGTTGAGCCGATTCTTCTTGAGGTTGATCAGATCTATCATCTGGCTTGCC 701 |||||||||| || |||||||| ||||| ||||||||||||||||| ||| |||| |||| Sbjct 630 GTCACGATGTAGTGGAGCCGATCCTTCTAGAGGTTGATCAGATCTACCATTTGGCATGCC 689 Query 702 CTGCCTCTCCTGTTCATTACAAATTCAATCCCGTCAAGACTATCAAGACGAATGTGGTTG 761 |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| | Sbjct 690 CTGCTTCTCCTGTTCACTACAAATTCAATCCCGTCAAGACTATCAAGACGAATGTGGTGG 749 Query 762 GAACACTGAACATGCTTGGTT-TGGCTAAGCGAGTCGGTGCTAGATTTCTT-CTGACGAG 819 ||||| |||||||| |||| | || ||| |||| || || ||||| ||| |||||||| Sbjct 750 GAACATTGAACATG-TTGGGACTAGCGAAGAGAGTGGGAGCAAGATT-CTTGCTGACGAG 807 Query 820 TACCAGTGAGGTCTATGGGGATCCTCTGCAGCATCCTCAGGTCGAGACTTACTGGGGCAA 879 ||| |||||||||||||| |||||||| || ||||||||||| ||||||||||||||||| Sbjct 808 TACGAGTGAGGTCTATGGAGATCCTCTTCAACATCCTCAGGTTGAGACTTACTGGGGCAA 867 Query 880 CGTTAATCCAATTGGTGTTCGTAGTTGCTACGATGAAGGAAAACGTACGGCAGAGACGTT 939 ||||||||| || |||||||| ||||| ||||| ||||| ||||||||||| ||||| || Sbjct 868 CGTTAATCCCATCGGTGTTCGGAGTTGTTACGACGAAGGCAAACGTACGGCTGAGACTTT 927 Query 940 GACCATGGACTATCACAGAGGTGCCAATGTTGAGGTCAGGATTGCTAGGATCTTCAACAC 999 ||||||||||||||||||||| || ||||||||||| |||||||||||||| |||||||| Sbjct 928 GACCATGGACTATCACAGAGGCGCTAATGTTGAGGTTAGGATTGCTAGGATATTCAACAC 987 Query 1000 CTATGGTCCAAGAATGTGTATAGATGATGGGCGTGTTGTCAGCAACTTCGTTGCACAGGC 1059 ||||| ||||| |||||||| ||||| || ||||| || |||||||||||||| ||||| Sbjct 988 TTATGGCCCAAGGATGTGTATCGATGACGGTCGTGTGGTTAGCAACTTCGTTGCCCAGGC 1047 Query 1060 ACTAAGGAAAGAACCATTGACTGTTTACGGTGATGGGAAGCAGACAAGGAGTTTCCAATT 1119 | |||| ||||| || ||||||||||| |||||||| |||||||| ||||||||||| || Sbjct 1048 ATTAAGAAAAGAGCCTTTGACTGTTTATGGTGATGGTAAGCAGACTAGGAGTTTCCAGTT 1107 Query 1120 TGTTTCTGATCTGGTTGAAGGTTTGATGAGATTGATGGAAGGAGAACATGTCGGGCCATT 1179 ||| ||||||||||| |||||| ||||||| |||||||| |||||||||||||| ||||| Sbjct 1108 TGTCTCTGATCTGGTGGAAGGTCTGATGAGGTTGATGGAGGGAGAACATGTCGGTCCATT 1167 Query 1180 TAACCTCGGTAACCCTGGTGAATTCACAATGCTCGAGCTCGCTAAG-G--TGGT------ 1230 |||||| |||||||| ||||||||||| |||||||||||||||||| | |||| Sbjct 1168 TAACCTTGGTAACCCCGGTGAATTCACCATGCTCGAGCTCGCTAAGTGGATGGTGGGTGA 1227 Query 1231 -C--------CAAGAGACGATTGATCAAAACGCAAACATAGAGTTCAGACCAAACACAGA 1281 | |||||||| ||||| | |||||||| ||||||||||||||||||||||| Sbjct 1228 GCAGGTGGTTCAAGAGACAATTGACCCGAACGCAAAGATAGAGTTCAGACCAAACACAGA 1287 Query 1282 AGACGACCCTCACAAGAG-AAAGCCTGACATCACAAAGGCCAAAGAGCTT-TTAGGTTGG 1339 |||||||| |||||||| ||| || |||||||||||||||||||||||| || |||||| Sbjct 1288 GGACGACCCACACAAGAGGAAA-CCAGACATCACAAAGGCCAAAGAGCTTCTT-GGTTGG 1345 Query 1340 GAACCAAAGGTCTCTCTTCGTCAGGGACTGCCTCTCATGGTCAAAGATTTCCGTCAACGT 1399 ||||||||||| |||| || || ||||| || || |||||||||||||||||||||||| Sbjct 1346 GAACCAAAGGTGGCTCTACGCCAAGGACTCCCACTTATGGTCAAAGATTTCCGTCAACGT 1405 Query 1400 GTCTTTGGTGACCA 1413 |||||||| ||||| Sbjct 1406 GTCTTTGGCGACCA 1419 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 81927289440 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5