BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg486890 Length=1762 Score E Sequences producing significant alignments: (Bits) Value AT5G01760.1 | Symbols: | ENTH/VHS/GAT family protein | chr5:29... 2128 0.0 > AT5G01760.1 | Symbols: | ENTH/VHS/GAT family protein | chr5:291712-294304 FORWARD LENGTH=1847 Length=1847 Score = 2128 bits (1152), Expect = 0.0 Identities = 1499/1658 (90%), Gaps = 58/1658 (3%) Strand=Plus/Plus Query 1 TTGTGGAATAAAGGCATTTTTAGACGAGAA-TT-TGT-G-TATGAGGCCATC-T-T-CTT 53 |||||||||||||||| |||| |||||||| || ||| | |||||||| || | | ||| Sbjct 2 TTGTGGAATAAAGGCA-TTTTCGACGAGAATTTCTGTAGAGATGAGGCCTTCTTGTGCTT 60 Query 54 CTTCTTCCTCATCCTCTGCTTCTCCTTCGTTTACGCTGTCTTCAGTGACAGTGACGGTGG 113 |||| ||||| |||||||||||||||||||| | ||| || |||||||||||| |||||| Sbjct 61 CTTCCTCCTCCTCCTCTGCTTCTCCTTCGTTGAGGCTATCGTCAGTGACAGTGGCGGTGG 120 Query 114 ACAAAGCCACAAGCGAGCTTCTCCGCACTCCTGATTGGACCATCATCATCGCCATCTGCG 173 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 ACAAAGCCACGAGCGAGCTTCTCCGCACTCCTGATTGGACCATCATCATCGCCATCTGCG 180 Query 174 ATTCCCTCAATTCTAATTGCTGGCAATGCAAATATGCGATCAAAGCCGTGAAGAGAAGAT 233 |||| |||||||||||| |||||||||||||| |||| |||||||||||||||||||||| Sbjct 181 ATTCTCTCAATTCTAATCGCTGGCAATGCAAAGATGCCATCAAAGCCGTGAAGAGAAGAT 240 Query 234 TGCAGCACAAGAGTTCTAAAGTGCAATTACTCACTTTAACGTTGTTGGAGGCAATGCACA 293 |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| | Sbjct 241 TGCAGCACAAGAGTTCTAGAGTTCAATTACTCACTTTAACGTTGTTGGAGGCAATGCTGA 300 Query 294 AAAATTGTGGTGACTTTGTGCATTCTCATATCACTAAGAAACATCTTCTTGAAGATATGG 353 | || || |||||||||||||||||||||||| || |||||||||||||||||||||||| Sbjct 301 AGAACTGCGGTGACTTTGTGCATTCTCATATCGCTGAGAAACATCTTCTTGAAGATATGG 360 Query 354 TTAAGATTGTCAGGAAAAAGGGTGATTTTGAAGTAAGGAACAGAA-TCTTGCTATTGTTG 412 ||||| |||||||||||||||||||||||||||||||||||| || ||||| | |||||| Sbjct 361 TTAAGCTTGTCAGGAAAAAGGGTGATTTTGAAGTAAGGAACA-AACTCTTGATTTTGTTG 419 Query 413 GATACTTGGAATGAAGCATTCAGTGGAGTTCCTTGTAAATACCCTCACTACAATTGGGCG 472 ||||| |||||||||||||||||||||||| |||| ||| ||||||||||||| ||||| Sbjct 420 GATACATGGAATGAAGCATTCAGTGGAGTTGCTTGCAAACACCCTCACTACAACTGGGCA 479 Query 473 TACCAAGAGCTTAAAGGGTGTGGGGTGACATTCCCACAGCGTTCCAAAGAAGCACCCCTG 532 ||||||||||||||| ||||||| |||| ||| ||||| ||||| ||||||||||||||| Sbjct 480 TACCAAGAGCTTAAACGGTGTGGTGTGAAATTTCCACAACGTTCGAAAGAAGCACCCCTG 539 Query 533 ATGCTTGCACCACCACCTCCAGTGACACA---TTCTTCTTCATCTTCTATGAATTTAATG 589 ||||||| ||||||||||||||||||||| |||||| || |||||||||||||||||| Sbjct 540 ATGCTTGAACCACCACCTCCAGTGACACAGTCTTCTTCCTCTTCTTCTATGAATTTAATG 599 Query 590 TCCATCGGTTCATTTAGAAGGCTCGACGAAACTATGGCTACAGAAATTGAGGGCCTAAGC 649 ||||| || |||||||||||||| ||||||||||||||||||||||||||| || ||||| Sbjct 600 TCCATTGGCTCATTTAGAAGGCTTGACGAAACTATGGCTACAGAAATTGAGAGCTTAAGC 659 Query 650 TTATCAAGCCTTGAATCCATGAGAAATGTGATTGATCTTGTGAACGACATGGTTCAAGCA 709 |||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| Sbjct 660 TTATCAAGCCTTGAATCCATGAGAAATGTGATGGATCTTGTGAATGACATGGTTCAAGCC 719 Query 710 GTGAATCCATCTGATAAATCAG-CTGTAAAAGATGAGCTAATAGTTGATCTAGTAGAGCA 768 || ||||| ||||||||||||| || |||||||||||||||||||||||||||||||||| Sbjct 720 GTTAATCCTTCTGATAAATCAGCCT-TAAAAGATGAGCTAATAGTTGATCTAGTAGAGCA 778 Query 769 GTGCAGATCTAATCAGAAGAAACTAATCCAGATGCTCACTACAACTGCTCATGAGGATGT 828 |||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| Sbjct 779 GTGCAGATCTAATCAGAAGAAACTAATCCAGATGCTCACTACAACTGCGGACGAGGATGT 838 Query 829 TATGACACGTGGGCTCGAGCTGAATGACTCTTTGCAGGTAGTGCTCGCGAGACATGACGC 888 | || ||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||| Sbjct 839 TCTGGCACGTGGTCTCGAGCTGAATGACTCTTTGCAGGTAGTGCTCGCTAGACACGACGC 898 Query 889 TATTGCATCTGGTGTCTCTCTTCCTATGTTG--G-AGGCCCCAGAG--A-------CAAG 936 |||||| ||||| |||||||||||| ||||| | ||||||||||| | |||| Sbjct 899 TATTGCCTCTGGCGTCTCTCTTCCTTTGTTGTTGCAGGCCCCAGAGCCAAGAGAGACAAG 958 Query 937 CTCTGCCCTCAAGACTTATGATGTTGTTGCTCTTGAGTCTG---ACTCTGAGTCTTCTTC 993 |||| |||||||||||| || || || |||||||||||||| |||||||||||||||| Sbjct 959 CTCTTCCCTCAAGACTTGTGGTGCTGCTGCTCTTGAGTCTGCTGACTCTGAGTCTTCTTC 1018 Query 994 GTCGTC---GAGCAGTGAAAGTGAAACAGATGAAGGGGAGGATATTAAAGATGACTTTAT 1050 || || |||||||||||||||||||||||||| ||||||| |||||||||||||||| Sbjct 1019 ATCATCATCGAGCAGTGAAAGTGAAACAGATGAAGTGGAGGATGTTAAAGATGACTTTAT 1078 Query 1051 GCAGCTAGCCAAAAGGCACACTCTATTAAGTGCCGAACACAGCGATGAAGAAGAAGAAAC 1110 ||||||||||||||||| ||||||||| |||| |||||||||||||||||||||||| Sbjct 1079 ACAGCTAGCCAAAAGGCATGCTCTATTAAATGCCCTACACAGCGATGAAGAAGAAGAAAC 1138 Query 1111 ATTGCTTCTAGGCA-CTGACAATGAAAAAATAGC-GAAAACAGAAGCCAAGACAAAGTGC 1168 |||||||||||||| | ||||||||||||| ||| ||| |||||||||||||| ||||| Sbjct 1139 ATTGCTTCTAGGCAAC-GACAATGAAAAAACAGCAGAAG-CAGAAGCCAAGACACAGTGC 1196 Query 1169 AAAAATCTAGCTTTGTTCGACACAACAACAACAAC--C-ACCAAGTCAGAGCAGGACATT 1225 ||| ||||||||||||||||||||||||||||||| | ||||||||||||||||| ||| Sbjct 1197 AAAGATCTAGCTTTGTTCGACACAACAACAACAACAACCACCAAGTCAGAGCAGGATATT 1256 Query 1226 ATTGAACTTCTCAGCCTAACTCTGTCAACAACTGCTCTACCCTCCCCACAAACGCAACCT 1285 |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 1257 ATTGAACTTCTCAGCCTAACTCTGTCAACAACTGCTCTGCCCTCCCCACAAACGCAACCG 1316 Query 1286 CAAATGCAACCACAAACGCAACCTCCATCtttttttGTTGATGATAATATTCTTATGAAC 1345 || | | | || ||| || | ||| ||||||| |||||||||||||||||||||| Sbjct 1317 CA---G-A-CG-CA---GCA-CC-C-ATCGTTTTTTGCTGATGATAATATTCTTATGAAC 1364 Query 1346 AGCTACGTTGTCCCCTGGGCACAGTCCCAAGAAGAACCGCAAGTCCCAAAAATGACTCAG 1405 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 1365 AGCTACGTTGTCCCCTGGGCACAGTCCCAAGAAGAACCACAAGTCCCAAAAATGACTCAG 1424 Query 1406 TTTGCTCCATCGGGACCTCAGTTTCAGCCATGGCCTCTGCAGCAGCAACAACCGT-TTAC 1464 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| || | Sbjct 1425 TTTGCTCCATCAGGACCTCAGTTTCAGCCATGGCCTCTGCAGCAGCAACAACCGTATT-C 1483 Query 1465 ATACGGTTATCCTCAGCCACAATGGAGCGGTGGTCAAGTAAATAGTAATGAAACAACATT 1524 ||||||||||||||||||||||||||||||||| |||||||| |||||||| |||||||| Sbjct 1484 ATACGGTTATCCTCAGCCACAATGGAGCGGTGGCCAAGTAAACAGTAATGACACAACATT 1543 Query 1525 GTGGAGCCAAGGATGCAATGAGAATAAGGTTTTTGAGAGAAACTTGCAA-TACTCAAACT 1583 |||||||||||| |||||||||||| ||| |||||||||||||||||| | |||||||| Sbjct 1544 CTGGAGCCAAGGAGGCAATGAGAATATGGTCTTTGAGAGAAACTTGCAAGT-CTCAAACT 1602 Query 1584 CCTTCCCCGCTAGAGCCACAAGG-ACATCCGGTGCTGC 1620 | || || ||||||||||| || |||||||||||||| Sbjct 1603 CATTTCCTGCTAGAGCCACG-GGCACATCCGGTGCTGC 1639 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 87148146120 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5