BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg486891 Length=858 Score E Sequences producing significant alignments: (Bits) Value AT5G01750.2 | Symbols: | Protein of unknown function (DUF567) ... 1099 0.0 > AT5G01750.2 | Symbols: | Protein of unknown function (DUF567) | chr5:289765-291326 FORWARD LENGTH=1140 Length=1140 Score = 1099 bits (595), Expect = 0.0 Identities = 722/782 (92%), Gaps = 13/782 (2%) Strand=Plus/Plus Query 68 CCTGAAACTTATCTTCACGACACAACGAGACcaa-aaaaaaaag-aaa-a-t-atttcaa 122 ||||||||||||||||||| || || ||||||| || |||||| ||| | | ||||||| Sbjct 147 CCTGAAACTTATCTTCACGGCATAATAAGACCAAGAAGAAAAAGAAAACATTAATTTCAA 206 Query 123 tcaaagcaaaaca-a-aaacaaaaaaTAGAGAGATCAGTGAATCAATTTTGGAGGAGAAA 180 |||||||||||| | | | ||||||||||||| ||||||||||||| || ||||||| Sbjct 207 CCAAAGCAAAACAGAGAGA-AAAAAATAGAGAG---AGTGAATCAATTTCGGTGGAGAAA 262 Query 181 GAAAAGAATGGAGCAGCCGTACGTGTATGCATACCCACAAGGCACAGGGCCTTCGGGACC 240 || |||||||||||||||||||||||| |||||||| ||||| | || || |||||| | Sbjct 263 GAGAAGAATGGAGCAGCCGTACGTGTACGCATACCCGCAAGGTAGTGGCCCCTCGGGAGC 322 Query 241 TCCGCCTCCACAAGCCGGAGGAGTGATAGTGGATCCAAGGTACTGCGCTCCTTACCCTGT 300 |||| |||||||||||||||||||| |||||||||||| ||||||||||||||||||| | Sbjct 323 TCCGACTCCACAAGCCGGAGGAGTGGTAGTGGATCCAAAGTACTGCGCTCCTTACCCTAT 382 Query 301 AGATCTGGCGATCGTACGGAAGATGATGAAGTTGACGGACGGCAACTTT-GTGATAACGG 359 |||| ||||||||||||||||||||||| ||| ||||||||||| ||| |||||||||| Sbjct 383 AGATATGGCGATCGTACGGAAGATGATGTCGTTAACGGACGGCAA-TTTCGTGATAACGG 441 Query 360 ACGTCAACGGAAACCTGCTGTTCAAGGTGAAGGAACCGGTGTTTGGTCTTCACGACAAGA 419 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 442 ACGTCAACGGAAACCTGCTGTTCAAGGTGAAGGAACCGGTGTTTGGTCTCCACGACAAGA 501 Query 420 GGATCTTGCTGGATGGTTCTGGTAATCCGGTCGTGACTTTGAGAGAAAAGATGGTGAGCA 479 || ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| Sbjct 502 GGGTCTTGCTGGATGGTTCTGGTACTCCGGTCGTCACTTTGAGAGAAAAGATGGTGAGCA 561 Query 480 TGCATGACAGATGGCAAGTGTTTAGAGGAGGGAGCACAGAGCAGCGTGATCTGCTTTACA 539 |||||||||| ||||||||||||||||||||||| || || |||||||||||||| |||| Sbjct 562 TGCATGACAGGTGGCAAGTGTTTAGAGGAGGGAGTACGGATCAGCGTGATCTGCTGTACA 621 Query 540 CGGTGAAGAGATCGTCGATGCTTCAGCTAAAGACAAAACTTGATGTGTTTTTGGGACACA 599 ||||||| |||||||||||||||||||||||||| ||||| ||||||||||||||||||| Sbjct 622 CGGTGAAAAGATCGTCGATGCTTCAGCTAAAGACCAAACTCGATGTGTTTTTGGGACACA 681 Query 600 ACAAAGATGAGAAGAGATGTGACTTCAGAGTCAAAGGGAGTTGGCTCGAGCGTTCTTGTG 659 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 682 ACAAAGATGAGAAGAGATGTGATTTCAGAGTCAAAGGGAGTTGGCTCGAGCGTTCTTGTG 741 Query 660 TTGTTTACGCCGGCGAATCTGACGCCATTGTTGCCCAAATGCACAGGAAGCACACAGTGC 719 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 742 TTGTTTACGCCGGCGAATCTGACGCCATTGTTGCCCAAATGCACAGGAAGCACACGGTGC 801 Query 720 AGAGCGTATTTTTGGGAAAAGACAATTTCTCAGTGACGGTTTATCCAAACGTCGATTATG 779 |||||||||| |||||||||||||| ||||| ||||| |||||||||||||||||||||| Sbjct 802 AGAGCGTATTCTTGGGAAAAGACAACTTCTCGGTGACTGTTTATCCAAACGTCGATTATG 861 Query 780 CCTTCATCGCCTCTCTCGTCGTCATTCTTGATGACGTCAACCGTGAAGACCGCACCGCCT 839 |||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||| Sbjct 862 CCTTCATCGCCTCTCTCGTCGTCATTCTCGATGACGTCAACCGCGAAGACCGCGCCGCCT 921 Query 840 GA 841 || Sbjct 922 GA 923 Score = 75.0 bits (40), Expect = 1e-12 Identities = 43/44 (98%), Gaps = 1/44 (2%) Strand=Plus/Plus Query 1 ttttttt-GTTTGTTCTTAGAGGAAATCTTTATCTTGGAATCTT 43 ||||||| |||||||||||||||||||||||||||||||||||| Sbjct 1 TTTTTTTGGTTTGTTCTTAGAGGAAATCTTTATCTTGGAATCTT 44 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 41845044451 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5