BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg486995
Length=1937
Score E
Sequences producing significant alignments: (Bits) Value
AT5G02180.1 | Symbols: | Transmembrane amino acid transporter ... 2815 0.0
AT3G09330.1 | Symbols: | Transmembrane amino acid transporter ... 562 4e-159
AT3G09340.1 | Symbols: | Transmembrane amino acid transporter ... 545 5e-154
AT5G02170.1 | Symbols: | Transmembrane amino acid transporter ... 416 4e-115
> AT5G02180.1 | Symbols: | Transmembrane amino acid transporter
family protein | chr5:430877-433741 FORWARD LENGTH=2007
Length=2007
Score = 2815 bits (1524), Expect = 0.0
Identities = 1822/1958 (93%), Gaps = 51/1958 (3%)
Strand=Plus/Plus
Query 1 AAATAGTTTTCTCTCCATTGATATGTTTCCATATATAGAAGAAATCTCTTTGACTCGCCG 60
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1 AAATAGTTTTCTCTCCATTGATATGTTTCCGTATATAGAAGAAATCTCTTTGACTCGCCG 60
Query 61 GAAAACAAAATCCCGTTGTTCTCCGTCTAtctctccctctctctctctGCACATTTCTTG 120
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 61 GAAAACAAAACCCCGTTGTTCTCCGTCTATCTCTCCCTCTCTCTCTCTGCACATTTCTTC 120
Query 121 TGCGTTTCTTTGAGATTTGAGAAAACATAGGAGGACGATGAAACTCGACGAAGAATTCTT 180
| | ||||||||||||||||||||||| |||| || ||||||||||||||||||||||||
Sbjct 121 TACCTTTCTTTGAGATTTGAGAAAACAGAGGAAGAAGATGAAACTCGACGAAGAATTCTT 180
Query 181 ACACGACAGAGACCATTCGTTTCTGACAGATGACGAGGAAAATCAAGCAGAACTTGCTTG 240
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 181 ACACGACAGAGACCATTCGTTTCTGACAGATGACGAGGAAAATCAAGCAGCACTTGCTTG 240
Query 241 TTCAGACGATG-A-AC-AC----A--ACGATGGTAAGAGAGACGGAGCGAATTCAGATTC 291
||| ||||||| | || || | |||| ||| ||||| ||||| |||||||||||
Sbjct 241 TTCCGACGATGAACACGACGGAGACGACGACGGTCGGAGAGGCGGAGAAAATTCAGATTC 300
Query 292 CTCCTCTCCGTTATCTCGAGACCGTTCTGATAACAATCTCTCTGATGTCTCGAATCCTCC 351
||||||||||||||| |||||||||||||||||||||||||| |||||||| || |||||
Sbjct 301 CTCCTCTCCGTTATCACGAGACCGTTCTGATAACAATCTCTCGGATGTCTCAAACCCTCC 360
Query 352 ATGGCCACAAAGCTATCGACAATCAATGGATCTGTTGACCGGAATGACTCCACCTTCGGT 411
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 361 ATGGCCACAAAGCTATCGACAATCAATGGATTTGTTGACCGGAATGACTCCACCTTCGGT 420
Query 412 GAGTTTCATGCCTCGAAGCAGTTCCCGGAGATTAGCCTCTTCCTTCCATAAGAAGCAACA 471
|||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 421 GAGTTTCATGCCTCAAAGCAGTTCCCGGAGATTAGCCTCTTCCTTCCAGAAGAAGCAACA 480
Query 472 ATCTTC-TTTTGTCGATTCGTTTTCTTCTTCCTCAAGCAAACCACTTCTCTCTCAAACAG 530
|||||| ||||| ||||||||| |||||||||||||||||||| |||||||||||| |||
Sbjct 481 ATCTTCGTTTTG-CGATTCGTTGTCTTCTTCCTCAAGCAAACCCCTTCTCTCTCAACCAG 539
Query 531 TTTCC-GACAAAGAAGAAACGA---TA----T-TA-CCTCAATCTCAGCTCAAGCTCTCT 580
|||| |||||||||||||||| || | | |||||||||||||||||||||||
Sbjct 540 -TTCCTGACAAAGAAGAAACGATTTTACCCGTCAACCCTCAATCTCAGCTCAAGCTCTCC 598
Query 581 GTCACCGATCTTCCATTACCGGAACCTAACCTCTGCTCCTTCTCTCAATCCGTCCTCAAC 640
|||||||||||||||||||||||||||||||||||||||||||||||||| || |||||
Sbjct 599 GTCACCGATCTTCCATTACCGGAACCTAACCTCTGCTCCTTCTCTCAATCTGTTCTCAAT 658
Query 641 GGAACCAATGTACTGTGTGGATTAGGGTTAATAACAATGCCTTATGCTATAAAAGAAAGT 700
|||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct 659 GGAACCAATGTACTGTGTGGATTAGGGTTAATAACAATGCCTTACGCTATTAAAGAAAGT 718
Query 701 GGATGGCTTGGTTTGGTAATACTCTTGTTCTTCGGAGTCATCACTTGCTACACAGGTGTT 760
|||||||||||| || ||||||||||||||||||||||| ||||||||||||||||||
Sbjct 719 GGATGGCTTGGTCTGCCCATACTCTTGTTCTTCGGAGTCATAACTTGCTACACAGGTGTT 778
Query 761 CTCATGAAGAGATGTCTAGAAAGTTCTCCTGGTCTTCAAACTTACCCCGATATCGGTCAA 820
|||||||| ||||||||||||||||| |||||| ||||||||||||||||||||||||||
Sbjct 779 CTCATGAAAAGATGTCTAGAAAGTTCCCCTGGTATTCAAACTTACCCCGATATCGGTCAA 838
Query 821 GCCGCCTTTGGAATCACCGGTCGCTTCATCATATCCATTCTTCTATACGTGGAGTTGTAC 880
|||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct 839 GCCGCCTTTGGAATCACCGGTCGCTTCATCATCTCTATTCTTCTATACGTGGAGTTGTAC 898
Query 881 GCAGCTTGTGTGGAATACATAATCATGATGAGCGACAACTTATCAGGACTATTCCCAAAC 940
||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct 899 GCAGCTTGTGTGGAATACATAATCATGATGAGCGATAACTTATCAGGGCTATTCCCAAAC 958
Query 941 GTTTCACTGAGCATTGCTTCAGGGATATCTCTAGATTCTCCTCAGATCTTTGCAATCTTA 1000
|||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 959 GTTTCATTGAGCATTGCTTCAGGGATATCTTTAGATTCTCCTCAGATCTTTGCAATCTTA 1018
Query 1001 ACCACTCTTCTTGTTCTTCCAACAGTCTGGCTTAAAGATCTTAGCTTGCTTTCTTACCTT 1060
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1019 ACCACTCTTCTTGTTCTTCCAACTGTCTGGCTTAAAGATCTTAGCTTGCTTTCTTACCTT 1078
Query 1061 TCAGTTGGAGGAGTCTTGGCGTCAATCTTACTCGGTCTCTGCCTTTTCTGGGTCGGTTTG 1120
|||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||
Sbjct 1079 TCAGTTGGAGGAGTCTTGGCGTCAATCTTACTCGGTATCTGCCTCTTCTGGGTCGGTGCA 1138
Query 1121 GTTGATGGAATAGGGTTCCATGCAACAGGACGAGTTTTCGATCTT-AGTAACTTACCTGT 1179
|| |||||||||||||| |||||||||||||||||||||||| || ||||||||||||||
Sbjct 1139 GTCGATGGAATAGGGTTTCATGCAACAGGACGAGTTTTCGAT-TTAAGTAACTTACCTGT 1197
Query 1180 CACTATAGGGATTTTCGGGTTTGGTTACTCGGGTCATTCGGTTTTTCCCAATATCTATTC 1239
||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct 1198 CACTATAGGGATTTTTGGATTTGGTTACTCGGGTCATTCGGTTTTTCCCAATATCTATTC 1257
Query 1240 TTCCATGAAGGATCCTTCAAGGTTTCCTCTTGTCTTAGTCATCTGCTTTAGTTTCTGCAC 1299
||| ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1258 TTCAATGAAAGATCCTTCAAGGTTTCCTCTTGTCTTAGTTATCTGCTTTAGTTTCTGCAC 1317
Query 1300 GGTCTTGTACATAGCTGTTGCGGTCTGCGGCTACACCATGTTTGGCGAAGCAGTCGAATC 1359
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1318 GGTCTTGTACATAGCTGTTGCGGTCTGCGGCTACACCATGTTTGGCGAAGCAGTGGAATC 1377
Query 1360 ACAATTCACATTAAACATGCCAAAACAATTCTTTCCATCTAAAGTCGCAGTCTGGACAGC 1419
||| |||||||| |||||||| || || |||||||||||||||||||| |||||||||||
Sbjct 1378 ACAGTTCACATTGAACATGCCTAAGCACTTCTTTCCATCTAAAGTCGCGGTCTGGACAGC 1437
Query 1420 GGTCATCACACCAATGACAAAATACGCGTTAACAACCACCCCAATCGTTATGAGTCTCGA 1479
|||||| ||||| ||||| |||||||| ||||||| ||||||||| ||||||||||||||
Sbjct 1438 GGTCATTACACCGATGACCAAATACGCTTTAACAATCACCCCAATAGTTATGAGTCTCGA 1497
Query 1480 AGAACTCATTCCAACAGCTAAGATGAAATCACATGGTGTATCGATATTATTCAGAACAGC 1539
|||||||||||||||||||||||||| ||||| |||||||||||||||||| ||||||
Sbjct 1498 AGAACTCATTCCAACAGCTAAGATGAGATCACGTGGTGTATCGATATTATTTAGAACAAT 1557
Query 1540 CCTAGTTACCTCTACTTTGGTGGTTGCTCTTTCAGTTCCTTTCTTCGCGATCGTGGCAGC 1599
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1558 GCTAGTTACCTCTACTTTGGTGGTTGCTCTTTCAGTTCCTTTCTTCGCGATCGTGGCAGC 1617
Query 1600 ACTAATCGGATCGTTCCTTGCAATGCTTGTGGCTCTTATCTTCCCATGTCTATGTTATCT 1659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1618 ACTAATCGGATCGTTCCTTGCAATGCTTGTGGCTCTTATCTTCCCATGTCTATGTTATCT 1677
Query 1660 CAGTATCCTCAAGGGTAAATTAAGCAACACACAAATTGGATTATGCATATTCATTATACT 1719
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1678 CAGTATCCTCAAGGGTAAATTAAGCAACACACAAATTGGATTATGCATATTCATTATAGT 1737
Query 1720 CTTCGGGTTGGTGAGTGGTTGTTGTGGTACTTACTCGGCTATCTCAAGATTAGCCAACCA 1779
||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1738 CTTCGGGGTGGTTAGTGGTTGTTGTGGTACTTACTCGGCTATCTCAAGATTAGCCAACCA 1797
Query 1780 AATGACATGATTAACTGAAATTT---A-----ATT-A------GGTGTGTTGTGTTCTAA 1824
||||||| ||||||||||||||| | ||| | |||||||||||||||||
Sbjct 1798 AATGACA-GATTAACTGAAATTTTCGACGGCGATTTAAAATTAGGTGTGTTGTGTTCTAA 1856
Query 1825 TTAATGTTTAT-ATATTATCTAGTTTTTCTTCAGTTTTGGTTCAGATTT-TGTTTA-TT- 1880
| |||||| |||||||||||||||| |||||||||||||||||||| | |||| ||
Sbjct 1857 T----GTTTATTATATTATCTAGTTTTTATTCAGTTTTGGTTCAGATTTCT-TTTAATTG 1911
Query 1881 TT--AGAAAACAAGCCGAGATAAAACCACATATACTTC 1916
|| || |||||||| ||||||||||||||||||||||
Sbjct 1912 TTTTAGGAAACAAGCAGAGATAAAACCACATATACTTC 1949
> AT3G09330.1 | Symbols: | Transmembrane amino acid transporter
family protein | chr3:2864782-2867230 REVERSE LENGTH=1575
Length=1575
Score = 562 bits (304), Expect = 4e-159
Identities = 915/1204 (76%), Gaps = 66/1204 (5%)
Strand=Plus/Plus
Query 602 GAACCTAACCTCTGCTC-CTTCTCTCAATCCGTCCTCAACGGAACCAATGTACTGTGTGG 660
||||| || ||||||| ||| ||||||| || || || |||| |||||| || |||||
Sbjct 388 GAACCAAATTTCTGCTCGTTTC-CTCAATCTGTTCTAAATGGAATCAATGTCCTTTGTGG 446
Query 661 ATTAGGGT-TAATAACAATGCCTTATGCTATAAAAGAAAGTGGATGGCT-TGG-TTTGGT 717
| || || || | ||||||||||| || | |||||| | |||||||| || ||| ||
Sbjct 447 AATA-AGTCTACTCACAATGCCTTACGCGGTGAAAGAAGGAGGATGGCTCGGGCTTT-GT 504
Query 718 AATACTCTTGTTCTTCG-GAGTCATCACTTGCTACACAGGTGTTCTCATGAAGA-GATGT 775
|||||||| | ||| | | |||||||||||||||| ||| | ||| | || | |||||
Sbjct 505 -ATACTCTTATCCTTTGCTA-TCATCACTTGCTACACCGGTATCCTCCTCAA-ACGATGT 561
Query 776 CTAGAAAGTTCTCCTGGTCTTCAAACTTACCCCGATATCGGTCAAGCCGCCTTTGGAATC 835
|| || || ||| ||| ||| | || ||||| || || |||||||| ||||||||| |
Sbjct 562 CTTGAGAGCTCTTCTGATCTCCGTACCTACCCGGACATTGGTCAAGCTGCCTTTGGATTT 621
Query 836 ACCGGTCGCTTCATCATATCCATTCTTCTATACGTGGAGTTGTACGCA-GCTTGTGTGGA 894
||||| ||| ||||||| ||||| ||| | ||| ||||||| |||| | | |||||||||
Sbjct 622 ACCGGCCGCCTCATCATCTCCATACTTTTGTACATGGAGTTATACGTATG-TTGTGTGGA 680
Query 895 ATACATAATCATGATGAGCGACAACTTATCAG-GACTATTCCCAAACGTTTCACTGAGCA 953
|| ||||||||||||||||| || ||||| | || | ||||| ||| || || | | ||
Sbjct 681 GTATATAATCATGATGAGCGATAATTTATC-GAGAGTTTTCCCCAACATTACATTAAACA 739
Query 954 TTGCTTCAGGGA-TATCTCTAGATTCTCCTCAGATCTTTGCAATCTTAACCACTCTTCTT 1012
| | || ||| |||||||||||||||||||||||||||| || | | | |||||| ||
Sbjct 740 TCG-TT---GGAGTATCTCTAGATTCTCCTCAGATCTTTGCTATATCAGCTACTCTTATT 795
Query 1013 GTTCTTCCAACAGTCTGGCTTAAAGATCTTAGCTTGCTTTCTTACCTTTCAGTTGGAGGA 1072
|||||||| ||||| ||||| ||||| |||||||| || || || || |||| ||||||
Sbjct 796 GTTCTTCCTACAGTTTGGCTCAAAGACCTTAGCTTACTCTCCTATCTCTCAGCCGGAGGA 855
Query 1073 GTCTTGGCGTCAATCTTACTCGGTCTCTGCCTTTTCTGGGTCGGTTTGGTTGATGGAATA 1132
||||| | || ||||| || | ||| || || |||||||| || | |||||||||| |
Sbjct 856 GTCTTTGTTTCGATCTTGCTTGCTCTTTGTCTCTTCTGGGTTGGGTCGGTTGATGGAGTC 915
Query 1133 GGGTTCCATGCAACAGGACGAGT-T-TTCGATCTTAG-TAACTTACCTGTCACTATAGGG 1189
||||| || | ||| | | | || ||||| | ||||||||| ||| |||| |||
Sbjct 916 GGGTTTCACACGGGTGGAAAA-TCTCTT-GATCTC-GCTAACTTACCCGTCGCTATTGGG 972
Query 1190 ATTTTCGGGTTTGG-TT-ACTCGGGTCATTCGGTTTTTCCCAATATCTATTCTTCCATGA 1247
|| ||||||||||| || | | || ||| | ||||| |||| || || ||||||||||
Sbjct 973 ATATTCGGGTTTGGGTTCAGT-GG-TCACGCAGTTTTACCCAGCATTTACTCTTCCATGA 1030
Query 1248 AGGATCCTTC-AAGGTTTCCTCTTG-T-CTTAGTCATCT-GCTTTAGTTTCTGCACGGTC 1303
| || || || ||| |||||| ||| | ||| |||| | | ||| |||||||| ||
Sbjct 1031 AAGAACCATCCAAG-TTTCCT-TTGGTGCTTC-TCAT-TAGTTTTGGTTTCTGCGTATTC 1086
Query 1304 TTGTACATAG-CTGTTGCGGTCTGCGGCTACACCATGTTTGGCGAAGC-AGTCGAATCAC 1361
|| ||||| | | || ||| | |||||||||| |||||||| || || | || ||||||
Sbjct 1087 TTTTACATTGTC-GTAGCGATTTGCGGCTACAGTATGTTTGGTGAGGCCATTC-AATCAC 1144
Query 1362 AATTCACATTAAACATGCCAAAACAATTCTTTCCATCTAAAGTCGCAGTCTGGACAGCGG 1421
| || ||| ||||||||||| | || | | |||||||| ||||||| ||||||||||
Sbjct 1145 AGTTTACACTAAACATGCCACAGCAGTACACAGCATCTAAAATCGCAGTTTGGACAGCGG 1204
Query 1422 TCATCAC-ACCAATGACAAAATACGCGTTAACAAC-CACCCCAATCGTTATGAG-TCTCG 1478
| | | ||| ||||| |||||||||||| | | ||| ||||| || | || ||| |
Sbjct 1205 TGGT-AGTACCGATGACCAAATACGCGTTAGCT-CTCACACCAATTGTGCT-AGGTCTAG 1261
Query 1479 AAGAACTCAT--T-CCAACAGCTAAGATGAAATCACATGGTGTATCGATATT-ATTCAGA 1534
||||||| || | ||| ||| ||||||| ||| |||| ||||| || || ||| | |
Sbjct 1262 AAGAACTTATGCTGCCATCAGAGAAGATGAGATCGTATGGAGTATCTATCTTTATTAA-A 1320
Query 1535 ACAGCCCT-AGTTAC-CTCTACTTTGGTGGTTGCTCTTTCAGTTCCT-TTCTTCGCGATC 1591
|| | | |||| | |||||||||||| || || ||| || |||| ||||||||||||
Sbjct 1321 AC-GATTTTAGTT-CTCTCTACTTTGGTTGTCGCACTTACA-TTCCCATTCTTCGCGATC 1377
Query 1592 GTGGCAGCACTAATCGGATCGTTCCTTGCAATGCTTGTGGCTCTTATCTTCCCATGTCTA 1651
||| || | || ||||| ||||| ||||||||||| | | ||||||| || |||||
Sbjct 1378 ATGGGGGCTTTGATGGGATCATTCCTCGCAATGCTTGTCGATTTTATCTTTCCTTGTCTT 1437
Query 1652 TGTTATCTCAGTATCCTCAAGGGTAAATTAAGCAACACACAAATTGGATTATGCATATTC 1711
||||||||||||||| | ||||||| ||| || || || ||||||||| ||||| |||||
Sbjct 1438 TGTTATCTCAGTATCTTGAAGGGTAGATTGAGTAAGACTCAAATTGGAATATGCGTATTC 1497
Query 1712 ATTATACTCTTCGGG--TTGGTGAGTGGTTGTTGTGGTACTTACTCGGCTATCTC-AAGA 1768
|| ||| ||| | || ||| | || ||||| || || || ||||| || || | ||||
Sbjct 1498 ATCATAATCT-CTGGCATTG-TAAGCGGTTGCTGCGGGACGTACTCCGCCAT-TGGAAGA 1554
Query 1769 TTAG 1772
||||
Sbjct 1555 TTAG 1558
> AT3G09340.1 | Symbols: | Transmembrane amino acid transporter
family protein | chr3:2868050-2870526 REVERSE LENGTH=1587
Length=1587
Score = 545 bits (295), Expect = 5e-154
Identities = 910/1202 (76%), Gaps = 62/1202 (5%)
Strand=Plus/Plus
Query 602 GAACCTAACCTCTGCTC-CTTCTCTCAATCCGTCCTCAACGGAACCAATGTACTGTGTGG 660
||||| || ||||||| ||| | ||||| || || || |||| |||||| || |||||
Sbjct 388 GAACCAAATTTCTGCTCGTTTC-CCCAATCTGTTCTAAATGGAATCAATGTCCTTTGTGG 446
Query 661 ATTAGGGT-TAATAACAATGCCTTATGCTATAAAAGAAAGTGGATGGCT-TGG-TTTGGT 717
| || || || | ||||||||||| || | |||||| | |||||||| || ||| ||
Sbjct 447 AATA-AGTCTACTCACAATGCCTTACGCGGTGAAAGAAGGAGGATGGCTCGGGCTTT-GT 504
Query 718 AATACTCTTGTTCTTCG-GAGTCATCACTTGCTACACAGGTGTTCTCATGAAGA-GATGT 775
|||||||| | ||| | | |||||||||||||||| ||| | ||| | || | |||||
Sbjct 505 -ATACTCTTATCCTTTGCTA-TCATCACTTGCTACACCGGTATCCTCCTCAA-ACGATGT 561
Query 776 CTAGAAAGTTCTCCTGGTCTTCAAACTTACCCCGATATCGGTCAAGCCGCCTTTGGAATC 835
|| || || ||| ||| ||| | || ||||| || || |||||||| ||||||||| |
Sbjct 562 CTTGAGAGCTCTTCTGATCTCCGTACCTACCCGGACATTGGTCAAGCTGCCTTTGGATTT 621
Query 836 ACCGGTCGCTTCATCATATCCATTCTTCTATACGTGGAGTTGTACGCA-GCTTGTGTGGA 894
|| || ||| ||||||| ||||| ||||| ||| ||||||| |||| | | |||||||||
Sbjct 622 ACAGGCCGCCTCATCATCTCCATACTTCTGTACATGGAGTTATACGTATG-TTGTGTGGA 680
Query 895 ATACATAATCATGATGAGCGACAACTTATCAG-GACTATTCCCAAACGTTTCACTGAGCA 953
|| ||||||||||||||||| || ||||| | || | ||||| ||| || || | | ||
Sbjct 681 GTATATAATCATGATGAGCGATAATTTATC-GAGAGTTTTCCCCAACATTACATTAAACA 739
Query 954 TTGCTTCAGGGA-TATCTCTAGATTCTCCTCAGATCTTTGCAATCTTAACCACTCTTCTT 1012
| | || ||| |||||||||||||||||||||||||||| || | | | |||||| ||
Sbjct 740 TCG-TT---GGAGTATCTCTAGATTCTCCTCAGATCTTTGCTATATCAGCTACTCTTATT 795
Query 1013 GTTCTTCCAACAGTCTGGCTTAAAGATCTTAGCTTGCTTTCTTACCTTTCAGTTGGAGGA 1072
|||||||| ||||| ||||| ||||| |||||||| || || || || |||| ||||||
Sbjct 796 GTTCTTCCTACAGTTTGGCTCAAAGACCTTAGCTTACTCTCCTATCTCTCAGCCGGAGGA 855
Query 1073 GTCTTGGCGTCAATCTTACTCGGTCTCTGCCTTTTCTGGGTCGGTTTGGTTGATGGAATA 1132
||||| | || ||||| || | ||| || || |||||||| || | |||||||||| |
Sbjct 856 GTCTTTGTTTCGATCTTGCTTGCTCTTTGTCTCTTCTGGGTTGGGTCGGTTGATGGAGTC 915
Query 1133 GGGTTCCATGCAACAGGACGAGTT-TTCGATCTTAG-TAACTTACCTGTCACTATAGGGA 1190
||||| || | ||| || | || ||||| | ||||||||| ||| |||| ||||
Sbjct 916 GGGTTTCACACGGGTGGAAAAGCTCTT-GATCTC-GCTAACTTACCCGTCGCTATTGGGA 973
Query 1191 TTTTCGGGTTTGG-TT-ACTCGGGTCATTCGGTTTTTCCCAATATCTATTCTTCCATGAA 1248
| ||||||||||| || | | || ||| | ||||| |||| || || |||||||||||
Sbjct 974 TATTCGGGTTTGGGTTCAGT-GG-TCACGCAGTTTTACCCAGCATTTACTCTTCCATGAA 1031
Query 1249 GGATCCTTC-AAGGTTTCCTCTTG-T-CTTAGTCATCT-GCTTTAGTTTCTGCACGGTCT 1304
|| || || ||| |||||| ||| | ||| |||| | | ||| |||||||| |||
Sbjct 1032 AGAACCATCCAAG-TTTCCT-TTGGTGCTTC-TCAT-TAGTTTTGGTTTCTGCGTATTCT 1087
Query 1305 TGTACATAGCTGTTGCGGTCTGCGGCTACACCATGTTTGGCGAAGC-AGTCGAATCACAA 1363
| ||||| || || ||| | |||||||||| |||||||| || || | || |||| ||
Sbjct 1088 TTTACATTGCCGTGGCGATTTGCGGCTACAGTATGTTTGGTGAGGCCATTC-AATCGCAG 1146
Query 1364 TTCACATTAAACATGCCAAAACAATTCTTTCCATCTAAAGTCGCAGTCTGGACAGCGGTC 1423
|| ||| ||||||||||| |||| | | |||||||| ||||||| |||||||||||
Sbjct 1147 TTTACACTAAACATGCCACAACAGTACACAGCATCTAAAATCGCAGTTTGGACAGCGGTG 1206
Query 1424 ATCAC-ACCAATGACAAAATACGCGTTAACAAC-CACCCCAATCGTTATGAG-TCTCGAA 1480
| | ||||||||| |||||||||||| | | ||| || || || | || | | |||
Sbjct 1207 GT-AGTACCAATGACCAAATACGCGTTAGCT-CTCACACCGATTGTGCT-AGGTTTAGAA 1263
Query 1481 GAACTCATTCCA--A-CAGCTAAGATGAAATCACATGGTGTATCGATATT-ATTCAGAAC 1536
||||| || || | ||| ||||||| ||| |||| ||||| || || ||| | |||
Sbjct 1264 GAACTTATGCCGCCATCAGAGAAGATGAGATCGTATGGAGTATCTATCTTTATTAA-AAC 1322
Query 1537 AGCCCT-AGTTAC-CTCTACTTTGGTGGTTGCTCTTTCAGTTCCT-TTCTTCGCGATCGT 1593
| | |||| | |||||||||||| || || ||| || |||| |||||||||||| |
Sbjct 1323 -GATTTTAGTT-CTCTCTACTTTGGTTGTCGCACTTACA-TTCCCATTCTTCGCGATCAT 1379
Query 1594 GGCAGCACTAATCGGATCGTTCCTTGCAATGCTTGTGGCTCTTATCTTCCCATGTCTATG 1653
|| || | || ||||| ||||| |||| |||||| | | ||||||| || ||||| ||
Sbjct 1380 GGGGGCTTTGATGGGATCATTCCTCGCAACGCTTGTCGATTTTATCTTTCCTTGTCTTTG 1439
Query 1654 TTATCTCAGTATCCTCAAGGGTAAATTAAGCAACACACAAATTGGATTATGCATATTCAT 1713
||||||||||||| | ||||||| ||| || || || ||||||||| ||||| | |||||
Sbjct 1440 TTATCTCAGTATCTTGAAGGGTAGATTGAGTAAGACTCAAATTGGAATATGCGTTTTCAT 1499
Query 1714 TATACTCTTCGGG--TTGGTGAGTGGTTGTTGTGGTACTTACTCGGCTATCTC-AAGATT 1770
||| ||| | || ||| | || ||||| || || || ||||| || || | ||||||
Sbjct 1500 CATAATCT-CTGGCATTG-TAAGCGGTTGCTGCGGGACGTACTCCGCCAT-TGGAAGATT 1556
Query 1771 AG 1772
||
Sbjct 1557 AG 1558
> AT5G02170.1 | Symbols: | Transmembrane amino acid transporter
family protein | chr5:427833-430695 FORWARD LENGTH=1830
Length=1830
Score = 416 bits (225), Expect = 4e-115
Identities = 900/1216 (74%), Gaps = 85/1216 (7%)
Strand=Plus/Plus
Query 620 TTCTCTCAATCCGTCCTCAACGGAACCAATGTACTGTGTGGATTAGGGTTAATAACAATG 679
|||||||||||||| |||||||||| || || || |||||| ||| ||| | ||||||
Sbjct 435 TTCTCTCAATCCGTTCTCAACGGAATTAACGTTCTATGTGGAGTAGCTTTACTTACAATG 494
Query 680 CCTTATGCTA-TAAAAGAAAGTGGATGGCTT--GG-TTTGGTAATACTCTTGTTCTTCGG 735
||||| || | | |||||| | |||||| || || ||| | |||||||| | ||| ||
Sbjct 495 CCTTACGC-AGTTAAAGAAGGAGGATGG-TTAGGGCTTT--TCATACTCTTCTCCTTTGG 550
Query 736 -AGTCATCACTTGCTACACAGGTGTTCTCATGAAGAGATGTCTAGA-AAGTTCTCCTGGT 793
| | ||||||| |||||| || ||||| | ||||||||||| || || || |||||
Sbjct 551 CA-TTATCACTTTCTACACCGGCATTCTCCTCAAGAGATGTCTCGAGAA-CTCCCCTGGA 608
Query 794 CTTCAAACTTACCCCGATATCGGTCAAGCCGCCTTTGGAATCACCGGTCGCTTCATCATA 853
| || |||||||| || ||||||||||| || || |||| ||| || ||| || || |
Sbjct 609 ATCCACACTTACCCGGACATCGGTCAAGCTGCATTCGGAACCACTGGACGCATCCTCGTC 668
Query 854 TCCATTCTTCTATACGTGGAGTTGTACGCAGCTTGTGTGGAATACATAATCATGATGAGC 913
|| || ||||| ||||| ||||| |||||| ||||||||||||||||||||||||||||
Sbjct 669 TCTATACTTCTCTACGTAGAGTTATACGCATCTTGTGTGGAATACATAATCATGATGAGT 728
Query 914 GACAACTTATCAGGACTATTCCCAAACGTTTCACTGAG-CATTGCTTCAGGGATAT-CTC 971
|| || || ||| || | |||||||| || || | ||| | | || || | ||
Sbjct 729 GATAATTTGTCAAGAATGTTCCCAAATACCTC-CTTATACAT--CAAC-GG-ATTTTCTT 783
Query 972 TAGATTCTCCTCA-GATCTTT-GCAATCTTAAC-C-ACTCTTCTTGTTCTTCCAACAGTC 1027
|||||||| |||| | | ||| || || | | | | |||||| |||||||||| || |||
Sbjct 784 TAGATTCTACTCAAG-T-TTTCGCCAT-T-ACCACGACTCTTATTGTTCTTCCTACTGTC 839
Query 1028 TGGCTTAAAGATCTTAGCTTGCTT-TCTTACCTTTCAGTTGGAGGAGTCTTGGCGTCAAT 1086
||||| ||||| || ||||| || || || || |||| ||||| ||| | | |||||
Sbjct 840 TGGCTCAAAGACCTCAGCTTA-TTGTCCTATCTCTCAGCCGGAGGTGTCATCTCCTCAAT 898
Query 1087 CTTACTCG-GTCTCTGCCT-TTTCTGGG-TCGGTTTGGTTGATGGAATAGGGTT-C-CAT 1141
||| || | | || ||||| ||| |||| | || | || || || | || || | |||
Sbjct 899 CTTGCTTGCG-CTTTGCCTCTTT-TGGGCT-GGATCAGTAGACGGGGTTGGATTTCACAT 955
Query 1142 GCAA-CAGGACGAGTT-TTCGATCTTAGTAACTTACCTGTCACTATAGGGATTTTCGGGT 1199
|| | |||| || | || ||| | | |||| |||||||| | || || |||| |||||
Sbjct 956 --AAGC-GGACAAGCTCTT-GATATAACTAACATACCTGTCGCAATCGGAATTTACGGGT 1011
Query 1200 TTGGTTACTCGGG--TCATTCGGTTTTTCCCAATATCTATTCTTCCATGAAGGATCCTTC 1257
| |||| ||||| ||| || ||||| ||||| || || || |||||||| || |||||
Sbjct 1012 TCGGTT--TCGGGAGTCACTCTGTTTTCCCCAACATTTACTCATCCATGAAAGAACCTTC 1069
Query 1258 -AAGGTTTCCT-CT-TGTCTTAGTCATCTGCTTTA-GTTTCTGCACGGTCTTGTACATAG 1313
||| |||||| | || ||| ||||| | ||| |||| ||||| | || ||||| |
Sbjct 1070 CAAG-TTTCCTACGGTG-CTTC-TCATCAGTTTTGCGTTT-TGCACTCTATTTTACATTG 1125
Query 1314 CTGTTGCGGTCTGCGGCTACACCATGTTTGGCGAAGC-AGTCGAATCACAATTCACATTA 1372
| || ||||| || || | ||| |||||||| || || | || |||| ||||| ||| |
Sbjct 1126 CGGTAGCGGTTTGTGGATTCACGATGTTTGGTGATGCGATTC-AATCCCAATTTACACTG 1184
Query 1373 AACATGCCAAAACAATTCTT-TCCATCTAAAGTCGCAGTCTGGACAGCGGTCATCACACC 1431
||||||||| ||| ||| || ||||||| |||||||||||||||||||| | |||||
Sbjct 1185 AACATGCCACCACATTTCACCTC-ATCTAAAATCGCAGTCTGGACAGCGGTCGTAACACC 1243
Query 1432 AATGACAAAATACGCGTTAACAACCACCCCAATCGTTATGAGTCTCGAAGAACTCAT--- 1488
|||||| |||||||| ||||| | ||| ||| | | | || || |||||||||||
Sbjct 1244 AATGACGAAATACGCTTTAACGATCACTCCAGTAATGCTAAGCCTAGAAGAACTCATACC 1303
Query 1489 -TC--CAACA-GCTAAGATGAAATC-ACATGGTGTATCGATATTATTCAGAAC-AGCCCT 1542
|| || || | ||||||| ||| | | ||||| || || | || ||||| | |
Sbjct 1304 GTCTTCATCAAGA-AAGATGAGATCCAAA-GGTGTCTCTATGCTCTTTAGAACCATAT-T 1360
Query 1543 AGTTAC-CTCTACTTTGGTGGTTGCTCTTTCAGTTCCTTTCTTCGCGA-TCGTGGCAGCA 1600
|||| | ||| |||||||| ||||| || ||||||| |||||||| | | ||||| ||
Sbjct 1361 AGTT-CTCTCCACTTTGGTCGTTGCACTCACAGTTCCATTCTTCGCTACT-GTGGCGGCT 1418
Query 1601 CTAATCGGATCGTTCCTTGCAATGCTTGTGGCTCTTA-TCTTCCCATGTCTATGTTATCT 1659
|| || ||||| ||| | ||||||||| | || ||| | ||||| ||||| |||||| |
Sbjct 1419 CTGATTGGATCTTTCATCGCAATGCTTATCGCG-TTAATATTCCCGTGTCTCTGTTATAT 1477
Query 1660 CAGTATCCTCAAGGGTAAATTAAGC-AACACACAAATTGGA-TTATGCATATTCATTAT- 1716
||| || | ||||||| ||||| | ||| || |||||| || || || || || |
Sbjct 1478 CAGCATTATGAAGGGTAGATTAA-CTAACTTTCAGATTGGAATT-TGTATTTTAATCGTG 1535
Query 1717 ACTCTTCGGG-TTGGTGAGTGGTTGTTGTGGTACTTACTCGGCTATCTCAAGATTAGCCA 1775
| | |||| ||| | || |||||||| || ||||| || |||||| | |||||| |
Sbjct 1536 A-TAATCGGCATTG-TAAGCGGTTGTTGCGGGACTTATTCTGCTATCGCCAGATTAATCG 1593
Query 1776 ACCAAATGACATGATT 1791
| ||||||| |||||
Sbjct 1594 GCGAAATGACCTGATT 1609
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 95933241495
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5