BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg487012 Length=2348 Score E Sequences producing significant alignments: (Bits) Value AT5G02370.1 | Symbols: | ATP binding microtubule motor family ... 3243 0.0 AT5G02380.1 | Symbols: MT2B | metallothionein 2B | chr5:506498-... 405 1e-111 > AT5G02370.1 | Symbols: | ATP binding microtubule motor family protein | chr5:503408-507244 FORWARD LENGTH=2417 Length=2417 Score = 3243 bits (1756), Expect = 0.0 Identities = 2156/2344 (92%), Gaps = 48/2344 (2%) Strand=Plus/Plus Query 41 TTGTTGGATTCTTCTTCGATTTCTAAAGTCAGGGTCGTCCTTAGGGTTCGTCCTTTTCTT 100 ||||| ||||| |||||||||||||| ||||| ||||||||||||||||||||||||||| Sbjct 70 TTGTTAGATTCGTCTTCGATTTCTAATGTCAGAGTCGTCCTTAGGGTTCGTCCTTTTCTT 129 Query 101 CCCC----G-----GGACGAG-G--G-G-C----GATCGTGCGTTTCCGTAATCAACAGC 142 |||| | ||||||| | | | | |||||||||||||||||||| | || Sbjct 130 CCCCGGGAGATTTCGGACGAGAGTTGTGACGGGAGATCGTGCGTTTCCGTAATCGGCGGC 189 Query 143 GATGCCGGAGAGGCTAGCGAAGTGACAGTTCACCTCAAAGATCCAGAGAGCTGTCGTAAC 202 |||| ||||| | ||||||||| | ||| |||||||||||||||| |||||||||||| Sbjct 190 GATGGAGGAGATACCAGCGAAGTGGCGGTTTACCTCAAAGATCCAGATAGCTGTCGTAAC 249 Query 203 GAAAGCTATCAGCTGGATGCGTTTTACGGGAGAGATGATGATAATGTGAAGCAGATATTC 262 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| Sbjct 250 GAAAGCTATCAGCTGGATGCGTTTTACGGGAGAGAGGATGATAATGTGAAGCATATATTC 309 Query 263 GATAGAGAATTAAGCCCTTTGATTCATGGGATCTTTCATGGTTTCAACGCTACAGTGCTT 322 ||||||||| ||||||||||||||| ||||||||||||||||||||| ||||| |||||| Sbjct 310 GATAGAGAAGTAAGCCCTTTGATTCCTGGGATCTTTCATGGTTTCAATGCTACTGTGCTT 369 Query 323 GCTTATGGAGCCACCGGAAGCGGAAAGACGTTTACGATGCAGGGAATTGATGAGCTACCA 382 ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| Sbjct 370 GCTTATGGAGCCACCGGAAGCGGAAAGACTTTTACGATGCAGGGAATCGATGAGCTACCA 429 Query 383 GGTCTGATGCCATTGACCATGTCCAACATTCTGTCTATGTGCGAGAAGAC-AGGAAGTAG 441 ||||||||||||||||||||||||| |||||||||||||||||||||||| ||| ||||| Sbjct 430 GGTCTGATGCCATTGACCATGTCCACCATTCTGTCTATGTGCGAGAAGACAAGG-AGTAG 488 Query 442 AGCAGATATTTCATATTATGAAGTTTACATGGACAGATGTTGGGATC-TCTTAGAAGTTA 500 || || |||||||||||||||||||||||||||||||||||||||| || ||||||||| Sbjct 489 GGCTGAGATTTCATATTATGAAGTTTACATGGACAGATGTTGGGATCTTC-TAGAAGTTA 547 Query 501 AAGCCAATGAGATTGCTATTTGGGATGAT-AAGAATGGACAAGTTCATCTTAAGGGACTT 559 ||| ||| ||||||||| ||||||||||| ||| |||||||||||||||||||||||||| Sbjct 548 AAGACAACGAGATTGCTGTTTGGGATGATAAAG-ATGGACAAGTTCATCTTAAGGGACTT 606 Query 560 TCTAGTGTCCCTGTTAACTCCATGCCTGAGTTTCACGAGGCATACTCGTGTGGCGTTCAG 619 ||||||||||||||||| |||||| |||||||||| ||||| || | ||||||||||||| Sbjct 607 TCTAGTGTCCCTGTTAAGTCCATGTCTGAGTTTCAAGAGGCGTATTTGTGTGGCGTTCAG 666 Query 620 CGGAGGAAAGTTGCACACACTGGTTTAAATGATGTCTCTAGTAGAAGCCATGGAGTGCTT 679 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 667 AGGAGGAAAGTTGCACACACTGGTTTAAATGATGTCTCTAGTAGAAGCCATGGAGTGCTT 726 Query 680 GTGATCTCAGTAACCTCTCAAGGGGCT-GTCACTGGAAAAATCAATTTGATTGACCTGGC 738 ||||||||||||||||| |||||| || |||||||| ||||||||| ||||||| || || Sbjct 727 GTGATCTCAGTAACCTCACAAGGG-CTTGTCACTGGTAAAATCAATCTGATTGATCTTGC 785 Query 739 AGGTAACGAAGATAATAGAAGGACAGGCAATGAAGGAATCCGTCTT-CAAGAGAGTGCCA 797 |||||||||||| ||||||||||||||||||||||| |||||| || ||||||||||||| Sbjct 786 AGGTAACGAAGACAATAGAAGGACAGGCAATGAAGGGATCCGT-TTACAAGAGAGTGCCA 844 Query 798 AGATTAATCAGTCATTATTTGCTTTGTCCAATGTGGTTTATGCACTGAATAATAACCTGC 857 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| | Sbjct 845 AGATTAATCAGTCATTATTTGCATTGTCCAATGTGGTTTATGCACTGAATAATAACCTCC 904 Query 858 CAAGAGTTCCTTACAGGGAAAGCAAATTGACTAGAATCCTGCAGGATTCACTTGGAGGAA 917 | ||||| || |||||||||| ||||||||||||||| ||||||||||||||||| |||| Sbjct 905 CTAGAGTGCCATACAGGGAAACCAAATTGACTAGAATACTGCAGGATTCACTTGGTGGAA 964 Query 918 CAAGTAGGGCTCTCATGGTCGCATGTCTGAATCCTGGAGAATACCAAGAATCTCTTCGCA 977 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 965 CAAGTAGGGCTCTCATGGTCGCATGTCTGAATCCTGGAGAATACCAAGAATCTCTTCGCA 1024 Query 978 CTGTTAGCTTGGCTGCAAGGTCAAGGCACATTTCAAACAATATTTCTTTGAATCCCAAGG 1037 | |||||| |||||||||||||||||||||| ||||||||| ||||| |||||||||||| Sbjct 1025 CCGTTAGCCTGGCTGCAAGGTCAAGGCACATCTCAAACAATGTTTCTCTGAATCCCAAGG 1084 Query 1038 TAGAGACCCCCAAGGTTAAGATAGATATGGGAGCAAAACTGCAAGCTTGGCTTGAATCAA 1097 ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| Sbjct 1085 TAGAGACCCCCAAGGTTAAGATAGACATGGAAGCAAAACTGCAAGCTTGGCTTGAATCAA 1144 Query 1098 AAGGCAAGACGAAAAGTGCGCATAGAATGATGGCAATACGTTCTCCATTGATGGGTACAA 1157 ||||||||| ||| || ||||||||||||||||||||||| ||||||||||||||||||| Sbjct 1145 AAGGCAAGATGAAGAGCGCGCATAGAATGATGGCAATACGGTCTCCATTGATGGGTACAA 1204 Query 1158 ACCAGACTTCAATTTCTCAAAGCTCAGTCAAGAAACT-CGGATGTCAAAGATCAACCATT 1216 ||||||||||||||||||||||||||||||||||| | | ||||| |||||| ||||| Sbjct 1205 ACCAGACTTCAATTTCTCAAAGCTCAGTCAAGAAATTACTC-TGTCATAGATCAGCCATT 1263 Query 1217 GCAGAAAGTGCTAAACTTGCTGGCACAGGACAGAGGGACGCATTTGTGACCGCAAGGAAC 1276 |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct 1264 GCAGAAAGTGCTAAGCTTGCCGGCACAGGACAGAGGGACGCATTTGTGACCGCAAGAAAC 1323 Query 1277 TTATTTGGTGGGGAAACTCATGCTGCTTCACATTTATGGGAACCAATACAGAATCTGCAC 1336 |||||||||| |||||||| |||||||||||||||||||||||| |||| ||||||||| Sbjct 1324 TTATTTGGTGTGGAAACTCTTGCTGCTTCACATTTATGGGAACCTATACGGAATCTGCAG 1383 Query 1337 TTAGCTTCTCCAACCAAAGGAGATGAGAGAGACACATCTGCCAAAGATAATCTATTGGTA 1396 ||||||||||||||||||| |||||||||||||||||||| | |||| |||||||||||| Sbjct 1384 TTAGCTTCTCCAACCAAAGAAGATGAGAGAGACACATCTGGCGAAGAGAATCTATTGGTA 1443 Query 1397 CCAGAAGCAAGCTTGAGAGATAACTCACTCGG--GCTCGAAAAGGAATACACAGAACTGA 1454 ||||||||||||||||||||||| || | || | |||| ||| |||| || ||||||| Sbjct 1444 TCAGAAGCAAGCTTGAGAGATAACACATT-GGATG-TCGAGAAGAAATATACTGAACTGA 1501 Query 1455 GTCCTTTTCGAGAAGCTCTGTCTCCAGTAGACTCAAATGCA---CCAAAATCAGCAGATG 1511 ||||| ||||||||||||| |||||| ||||||| |||||| ||||| |||||| | | Sbjct 1502 GTCCTCTTCGAGAAGCTCTATCTCCAATAGACTCCAATGCAAAACCAAATTCAGCACACG 1561 Query 1512 CAAGCTCTCCCATTCTCAAGCCAATGACTCCAAAAACACCTTTTATTTATGCAAATGCTG 1571 ||||||||| |||| ||||||||||| ||||||||||||||| ||| | |||| ||| Sbjct 1562 GAAGCTCTCCTTTTCTGAAGCCAATGACCCCAAAAACACCTTTTCTTTCTACAAACCCTG 1621 Query 1572 AGAAT-ATGCAAATGGAAGGCACTTGCCAGAAGTTCAATGCATGGAGCACTAATTTAAAG 1630 | ||| ||||| ||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 1622 A-AATTATGCAGATGGAAGGCACTTGCCAGAAGTTCAATGCATGGAGCAATAATTTAAAG 1680 Query 1631 ACCTCTCTCATAAAAGAGTACATTCACTTCTTGAACACAGCCAACAGAAAGGAGCTAAGG 1690 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 1681 ACCTCTCTCATAAAAGAGTACATTCACTTCTTGAACACAGCCAACAGAGAGGAGCTAAGG 1740 Query 1691 GAGTTAAAGGGAATTGGACAGAAGATGGCTGAGTACATTATTGAACTCAGAGAAACAAGC 1750 || |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| Sbjct 1741 GAATTAAAGGGAATTGGGCAGAAGATGGCTGAGTACATCATTGAACTCAGAGAAACAAGC 1800 Query 1751 CCTTTAAAATCGCTTACCGACTTAGAGAAGATCGGTTTCACCTCAAGACAGGTACATAAC 1810 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 1801 CCTTTAAAATCGCTTACCGACTTAGAAAAGATCGGTTTCACCTCAAGACAGGTACATAAC 1860 Query 1811 CAATTCAAAAAAGCCACAGAAGGAATTCTTGAGAAGCCAGTTTCTGCTTCAACAACACCT 1870 | ||||||||||||||| |||||| | || |||||||||||||||||||||||||||||| Sbjct 1861 CTATTCAAAAAAGCCACTGAAGGAGTCCTCGAGAAGCCAGTTTCTGCTTCAACAACACCT 1920 Query 1871 TAGTTGTTGTCTCTAGCAAACAAACAACACTTGTGTATTATG--AGTTCTGTCTCGCGTA 1928 ||||||||||||||||||||||| ||||||||||||||||| |||||| ||||| ||| Sbjct 1921 TAGTTGTTGTCTCTAGCAAACAA-CAACACTTGTGTATTATATCAGTTCTATCTCGTGTA 1979 Query 1929 ATCTCATTATTGTCTGTTCTTGTTTGTTTAA-CTTTATAACCAGAGAGATA-TGTACTTG 1986 || |||||||||||||||||||| ||||||| ||||||||||||||||| | || |||| Sbjct 1980 ATTTCATTATTGTCTGTTCTTGTATGTTTAAGCTTTATAACCAGAGAGACAATGGGCTTG 2039 Query 1987 AATCTTAATTGTGTACTGAGCAAGAAAGAAGCAAACTTTAATACAGACCCATAATAGTTT 2046 ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| | Sbjct 2040 AATCTTAATTGTGTAGTGAGCAAGAAAGAAGCAAACTTTAATACAAACCCATAATAGTCT 2099 Query 2047 TCG-ATTAATACAGTCACAAAGATAAAACTTTGCAGAGATATCTTAATGACCAAACCATA 2105 | | ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2100 TAGGATTAATAAAGTCACAAAGATAAAACTTTGCAGAGATATCTTAATGACCAAACCATA 2159 Query 2106 AAA-CACACAGAAGAAAGAAGAGAAAGACCAACGTCGCCGGCAAAACTACCGGCGACATC 2164 ||| |||||| | ||| |||||||||||||||||||||||||||||||||||| | ||| Sbjct 2160 AAAACACACACA-GAA-GAAGAGAAAGACCAACGTCGCCGGCAAAACTACCGGAAAAATC 2217 Query 2165 AGCTAATTATTACATATAAGCAAACCTAACATAACATTAGGGTTATTACAGACTTAGGGT 2224 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2218 AGCCAATTATTACATATAAGCAAACCTAACATAACATTAGGGTTATTACAGACTTAGGGT 2277 Query 2225 TTATGGAGTTCTTCATTTGCAGCCAGATCCGCAACCACAGCTTCCACCACAGCAAGACAT 2284 ||||| |||||||||||||||| ||||||| ||||||||||||||||||||||||||||| Sbjct 2278 TTATGAAGTTCTTCATTTGCAGGCAGATCCACAACCACAGCTTCCACCACAGCAAGACAT 2337 Query 2285 GTTTTTTCTAGAAAATTGGAAGAGATCTCAGAAGAATTATGAAGATGATCTTAATTTGCC 2344 |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| Sbjct 2338 GTTTTTTCTAGAAAATTGGAAGAGATCTGAGAAGATTTATGAAGATGATCTTAATTTGCC 2397 Query 2345 TTAA 2348 |||| Sbjct 2398 TTAA 2401 > AT5G02380.1 | Symbols: MT2B | metallothionein 2B | chr5:506498-507244 REVERSE LENGTH=571 Length=571 Score = 405 bits (219), Expect = 1e-111 Identities = 251/266 (94%), Gaps = 4/266 (2%) Strand=Plus/Minus Query 1983 CTTGAATCTTAATTGTGTACTGAGCAAGAAAGAAGCAAACTTTAATACAGACCCATAATA 2042 ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| Sbjct 568 CTTGAATCTTAATTGTGTAGTGAGCAAGAAAGAAGCAAACTTTAATACAAACCCATAATA 509 Query 2043 GT-TTTCGATTAATACAGTCACAAAGATAAAACTTTGCAGAGATATCTTAATGACCAAAC 2101 || || |||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 508 GTCTTAGGATTAATAAAGTCACAAAGATAAAACTTTGCAGAGATATCTTAATGACCAAAC 449 Query 2102 CAT-AAAACACACAGAAGAAAGAAGAGAAAGACCAACGTCGCCGGCAAAACTACCGGCGA 2160 ||| |||||||||| || |||||||||||||||||||||||||||||||||||||| | Sbjct 448 CATAAAAACACACA-CAG-AAGAAGAGAAAGACCAACGTCGCCGGCAAAACTACCGGAAA 391 Query 2161 CATCAGCTAATTATTACATATAAGCAAACCTAACATAACATTAGGGTTATTACAGACTTA 2220 |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 390 AATCAGCCAATTATTACATATAAGCAAACCTAACATAACATTAGGGTTATTACAGACTTA 331 Query 2221 GGGTTTATGGAGTTCTTCATTTGCAG 2246 ||||||||| |||||||||||||||| Sbjct 330 GGGTTTATGAAGTTCTTCATTTGCAG 305 Score = 178 bits (96), Expect = 2e-43 Identities = 104/108 (96%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 2241 TTGCAGCCAGATCCGCAACCACAGCTTCCACCACAGCAAGACATGTTTTTTCTAGAAAAT 2300 |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 124 TTGCAGGCAGATCCACAACCACAGCTTCCACCACAGCAAGACATGTTTTTTCTAGAAAAT 65 Query 2301 TGGAAGAGATCTCAGAAGAATTATGAAGATGATCTTAATTTGCCTTAA 2348 |||||||||||| |||||| |||||||||||||||||||||||||||| Sbjct 64 TGGAAGAGATCTGAGAAGATTTATGAAGATGATCTTAATTTGCCTTAA 17 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 116565665490 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5