BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg487084
Length=2411
Score E
Sequences producing significant alignments: (Bits) Value
AT5G03140.1 | Symbols: | Concanavalin A-like lectin protein ki... 3568 0.0
AT3G08870.1 | Symbols: | Concanavalin A-like lectin protein ki... 52.8 1e-05
> AT5G03140.1 | Symbols: | Concanavalin A-like lectin protein
kinase family protein | chr5:737590-740016 REVERSE LENGTH=2427
Length=2427
Score = 3568 bits (1932), Expect = 0.0
Identities = 2254/2405 (94%), Gaps = 39/2405 (2%)
Strand=Plus/Plus
Query 22 TTTTGTATGATTGTATCAGT--GAGAACCCAACAACCTCCAAATTCTTCCAACTTCCTCA 79
|||||||||||||||||||| ||||||||||||||||||||| || ||||||||
Sbjct 44 TTTTGTATGATTGTATCAGTGAGAGAACCCAACAACCTCCAAA---TT----CTTCCTCA 96
Query 80 GGT-TTCAAAGGAATCCAATGAAAAA-TATATACAAATGTTGAAAATTCCTCCGAGATTC 137
| | | |||||||||||||||||||| | || || |||||||||| ||||||||||||||
Sbjct 97 GATCTCCAAAGGAATCCAATGAAAAACT-TAAACTAATGTTGAAACTTCCTCCGAGATTC 155
Query 138 TTCTCTGTTTACTCAACTCTCATCCACATTATTGCCTCCTTCCTCTGCTCCTCCGACGTC 197
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 156 TTCTCTGTTTACTCAACTCTCATCCACATTCTTGCCTCCTTCCTCTGCTCCTCCGACGTC 215
Query 198 AGAGGCGATTTTCCGGCGACGAGATTCGATCTCGGAACGTTGACTCTCTCAAGTCTCAAG 257
||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 216 AGAGGCGATTTCCCGGCGACGAGATTCGATCTCGGAACGTTGACTCTCTCAAGCCTCAAA 275
Query 258 CTTCTCGGGGATGCTCATCTCAACAACGGAACTATTAAGCTCACTCGTGAACTCTCTGTT 317
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 276 CTTCTCGGCGATGCTCATCTCAACAACGGAACTATTAAGCTCACTCGTGAACTCTCTGTT 335
Query 318 CCCACTTCCACCGCCGGGAAAGCTCTTTATGGAAAACCGGTTAAATTCCGGCACCCGGAG 377
||||||||||||||||| |||||||||||||| |||||||| |||||||||||||||||
Sbjct 336 CCCACTTCCACCGCCGGAAAAGCTCTTTATGGGAAACCGGTAAAATTCCGGCACCCGGAA 395
Query 378 ACTAAATCTCCGGCGAGTTTCACCACTTACTTCTCCTTCTCGGTAACGAATCTCAATCCT 437
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 396 ACTAAATCTCCGGCGAGTTTCACTACTTACTTCTCCTTCTCGGTAACGAATCTCAATCCT 455
Query 438 TCCTCAATTGGCGGTGGGTTAGCTTTCGTAATCTCCCCTGATGCAGATTACTTAGGATCC 497
||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||
Sbjct 456 TCCTCAATTGGCGGTGGATTAGCTTTCGTAATCTCCCCTGATGAAGATTACTTAGGATCC 515
Query 498 GCCGGTGGATTTCTCGGTCTAACCGAAGAAACCGGATCCGGGTCGGGTTTTGTGGCGGTT 557
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 516 ACCGGTGGATTTCTCGGTCTAACCGAAGAAACCGGATCCGGGTCGGGTTTTGTGGCGGTT 575
Query 558 GAATTCGATACGCTGATGGATGTACAATTCAAAGACGTAAACGGGAACCACGTGGGATTG 617
|||||||||||| | |||||||| |||||||||||||| |||||||||||||||||||||
Sbjct 576 GAATTCGATACGTTAATGGATGTGCAATTCAAAGACGTTAACGGGAACCACGTGGGATTG 635
Query 618 GATCTAAACGCCGTCGTTTCAGCCGCGGTAGCCGATTTAGGAAACGTCGACATCGATCTC 677
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 636 GATCTAAACGCCGTCGTTTCAGCCGCGGTAGCCGATTTGGGAAACGTCGACATCGATCTC 695
Query 678 AAGAGCGGAAACGCCGTGAATTCATGGATCACTTATGACGGGTCGGGTCGAGTTTTATCA 737
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||
Sbjct 696 AAGAGCGGAAACGCCGTGAATTCATGGATCACTTATGACGGGTCGGGTCGGGTTTTAACA 755
Query 738 GTTTACGTCTCTTACTCAAACGTGAAACCTAAATTGCCGATTTTGTCGGTTCCTCTTGAT 797
||||||||||||||||||||| |||||||||||| ||||||||||||||||||||| |||
Sbjct 756 GTTTACGTCTCTTACTCAAACTTGAAACCTAAATCGCCGATTTTGTCGGTTCCTCTCGAT 815
Query 798 CTTGATCGTTACGTGAA-CGATTCAATGTTCGTCGGATTCTCTGGATCAACACAAGGAAG 856
|||||||||||||| || |||||||||||| || ||||||||||||||||||||||||||
Sbjct 816 CTTGATCGTTACGT-AAGCGATTCAATGTTTGTTGGATTCTCTGGATCAACACAAGGAAG 874
Query 857 CACAGAGATTCACAGTATCGATTGGTGGAGCTTTAGTTCATCTTTC---GATTCATCGGA 913
||| |||||||||||| ||||||||||||||||||||||||||||| || ||||||||
Sbjct 875 CACTGAGATTCACAGTGTCGATTGGTGGAGCTTTAGTTCATCTTTCGAAGAATCATCGGA 934
Query 914 ATCTCCACCGCCGATGTCTAATTCTCCTCCTCCCTCGTCTCCGTCGTCAACATCGATCAC 973
||| |||||||||||| |||||||||||||||| ||||| ||||| | |||| |||||
Sbjct 935 ATCACCACCGCCGATGCCTAATTCTCCTCCTCCGTCGTCACCGTC-T--TCATCAATCAC 991
Query 974 ACCATCCGTATCCACCGTCCGGAAG-AAAACCGCCGATCCATCGTCCTCTTGCCGTAACA 1032
||||||| |||||||||||||| || ||||||||||||||||||||||||||||||||||
Sbjct 992 ACCATCCCTATCCACCGTCCGG-AGAAAAACCGCCGATCCATCGTCCTCTTGCCGTAACA 1050
Query 1033 AACTCTGTAAAAAATCACCAGCCGCCGTCGCCGGAGTTGTAACAGCCGGAGCATTTTTCT 1092
||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||
Sbjct 1051 AACTCTGTAAAAAATCACCAGCCGCCGTCGCCGGAGTAGTAACCGCCGGAGCATTTTTCT 1110
Query 1093 TAGCACTATTCGCCGGAGTGATAATCTGGGTTTACTCCAAAAAGATCAAATACAATCAAA 1152
||||| ||||||||||||||||||||||||||||||| |||||||||||||||| || ||
Sbjct 1111 TAGCATTATTCGCCGGAGTGATAATCTGGGTTTACTCTAAAAAGATCAAATACACTCGAA 1170
Query 1153 AGTCTGAATCTTTCGCATCGGAAATCATGAAATCGCCGAGAGAATTCACTTACAAGGAGC 1212
||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||
Sbjct 1171 AGTCTGAATCTTTAGCATCGGAAATAATGAAATCGCCGAGAGAGTTCACTTACAAGGAGC 1230
Query 1213 TGAAATTAGCCACCGACTCTTTCAGCTCATCGAGAGTCATCGGAAACGGAGCATTTGGCA 1272
|||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||
Sbjct 1231 TGAAATTAGCCACCGACTGTTTCAGCTCATCGAGAGTCATCGGAAACGGAGCATTCGGCA 1290
Query 1273 CCGTCTATAAAGGAATCTTACCGGATACCGGCGAAATCATCGCAATCAAAAGATGCAGCC 1332
||||||| ||||||||||||| ||| |||||||||| ||||||||||||||||||||||
Sbjct 1291 CCGTCTACAAAGGAATCTTACAAGATTCCGGCGAAATTATCGCAATCAAAAGATGCAGCC 1350
Query 1333 ATATTTCTCAAGGGAACACCGAATTCTTATCTGAATTATC-CTTAATCGGAACACTCCGT 1391
| ||||||||||| ||||| ||||||||||| |||||||| || ||||||||| ||||||
Sbjct 1351 ACATTTCTCAAGGAAACACAGAATTCTTATCGGAATTATCTCT-AATCGGAACCCTCCGT 1409
Query 1392 CACCGGAATCTTCTCCGTCTTCAAGGCTACTGCAGAGAAAAAGGCGAAATTTTGTTAATT 1451
||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||
Sbjct 1410 CACCGGAATCTTCTCCGTCTTCAAGGCTATTGCAGAGAAAAAGGCGAAATTCTGTTAATT 1469
Query 1452 TACGATTTAATGCCTAATGGATCACTCGATAAAGCACTTTACGAGTCTCCGACGACGTTA 1511
|| ||| ||||||||||||||||||| ||||||||||| |||||||||||||| || |||
Sbjct 1470 TATGATCTAATGCCTAATGGATCACTTGATAAAGCACTCTACGAGTCTCCGACTACATTA 1529
Query 1512 CCATGGCCTCACCGGAGAAAAATACTTCTCGGAGTCGCTTCCGCTTTGGCTTATTTGCAT 1571
|| |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct 1530 CCCTGGCCTCACCGGAGAAAAATACTTCTTGGAGTCGCTTCTGCTTTGGCTTATTTGCAT 1589
Query 1572 CAGGAGTGCGAGAATCAAATTATTCACCGTGATGTCAAAACAAGTAACATTATGCTCGAC 1631
|| |||||||||||||| || |||||||||||||| ||||||||||||||||||||||||
Sbjct 1590 CAAGAGTGCGAGAATCAGATCATTCACCGTGATGTTAAAACAAGTAACATTATGCTCGAC 1649
Query 1632 GCAAATTTTAATCCGAAATTAGGCGATTTTGGACTCGCGAGGCAAACGGAGCACGATAAA 1691
|| |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1650 GCGAATTTTAATCCGAAGTTAGGTGATTTTGGACTCGCGAGGCAAACGGAGCACGATAAA 1709
Query 1692 TCGCCGGACGCAACCGCCGCTGCTGGAACAATGGGGTATTTAGCGCCGGAGTATTTGTTA 1751
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1710 TCGCCGGACGCAACCGCCGCCGCTGGAACAATGGGGTATTTAGCGCCGGAGTATTTGTTA 1769
Query 1752 ACCGGTCGAGCGACGGAGAAAACCGACGTTTTCAGCTACGGAGCCGTTGTGCTAGAAGTA 1811
|||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct 1770 ACCGGTCGAGCGACGGAGAAAACCGACGTTTTTAGCTACGGAGCCGTTGTTTTAGAAGTA 1829
Query 1812 TGCACTGGTAGAAGACCCATAACCCGACCCGAACCGGAACCCGGTTTAAGACCCGGTTTG 1871
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1830 TGCACTGGTAGAAGACCCATAACCCGACCCGAACCGGAACCCGGTTTAAGACCCGGTTTG 1889
Query 1872 AGATCGAGTTTGGTAGATTGGGTTTGGGGTTTGTATAGAGAAGGGAAGCTATTGACGGCG 1931
|| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||
Sbjct 1890 AGGTCGAGTTTGGTAGATTGGGTTTGGGGTTTGTATAGAGAAGGGAAGTTATTGACCGCC 1949
Query 1932 GTGGACGAACGGTTGAGTGAGTTTGACCCGGAGGAGATGAATCGGGTTTTGATGGTGGGC 1991
|||||||| ||||||||||||||| ||||||||||||||| ||||||| |||||||||||
Sbjct 1950 GTGGACGAGCGGTTGAGTGAGTTTAACCCGGAGGAGATGAGTCGGGTTATGATGGTGGGC 2009
Query 1992 CTTGCTTGTTCTCAACCCGATCCGGTGACTC-GGCCCACTATGAGAAGTGTGGTTCAGAT 2050
||||||||||| |||||||||||||| || | ||||||||||||||||||||||||||||
Sbjct 2010 CTTGCTTGTTCACAACCCGATCCGGTCAC-CAGGCCCACTATGAGAAGTGTGGTTCAGAT 2068
Query 2051 TCTTGTTGGTGAAGCTGATGTGCCGGAAGTTCCGGTTGCGAAGCCGTCTTCGTCAATGAG 2110
|||||||||||||||||||||||||||||||||| ||||||| ||||| ||||| |||||
Sbjct 2069 TCTTGTTGGTGAAGCTGATGTGCCGGAAGTTCCGATTGCGAAACCGTCGTCGTCGATGAG 2128
Query 2111 CTTTAGTACGTCGGAGTTATTGCTTACGTTACAAGACAGTGTATCGGACTGTAACGAAGT 2170
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 2129 TTTTAGTACGTCGGAGTTATTGCTTACGTTACAAGACAGTGTATCGGACTGTAATGAAGT 2188
Query 2171 TTTGGCTCCGATCTCAACGACTTCTT---CGTCGTCGGAACATGACATCTTCATTGTCGG 2227
|||||||||||| ||||||||||||| | ||||||||||| |||||||||||||||||
Sbjct 2189 TTTGGCTCCGATTTCAACGACTTCTTGTTCCTCGTCGGAACACGACATCTTCATTGTCGG 2248
Query 2228 CAAGGATCGATCGGTTTAAAAATAATATTTATTTAAATGAcaaattaattataaaattcg 2287
|||||| |||||||||| ||| ||| ||| ||| ||||||||| ||||| ||||||| ||
Sbjct 2249 CAAGGACCGATCGGTTTGAAA-TAA-ATT-ATTCAAATGACAA-TTAAT-ATAAAATACG 2303
Query 2288 aagcaaaattttgtacgtaaattgaaaataaacaaaatccaaaaactttatactaatttt 2347
||||| ||||||||||||||||||||||||||||||| |||||||| ||||||||| |
Sbjct 2304 AAGCACAATTTTGTACGTAAATTGAAAATAAACAAAAACCAAAAAC---ATACTAATTGT 2360
Query 2348 aaaaaatGTTGGAAGTATATGTATATTTTCTGTTCGATTT-AATAATTCTTGGTTTTGGA 2406
||||| ||||||| || |||||||||||||||||||||| |||||||||||||||||||
Sbjct 2361 AAAAA-TGTTGGATTTACATGTATATTTTCTGTTCGATTTTAATAATTCTTGGTTTTGGA 2419
Query 2407 ACCTC 2411
|||||
Sbjct 2420 ACCTC 2424
> AT3G08870.1 | Symbols: | Concanavalin A-like lectin protein
kinase family protein | chr3:2700355-2702581 REVERSE LENGTH=2227
Length=2227
Score = 52.8 bits (28), Expect = 1e-05
Identities = 28/28 (100%), Gaps = 0/28 (0%)
Strand=Plus/Plus
Query 1647 AAATTAGGCGATTTTGGACTCGCGAGGC 1674
||||||||||||||||||||||||||||
Sbjct 1528 AAATTAGGCGATTTTGGACTCGCGAGGC 1555
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 119728299825
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5