BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg487117 Length=2127 Score E Sequences producing significant alignments: (Bits) Value AT5G03420.1 | Symbols: | 5'-AMP-activated protein kinase-relat... 2130 0.0 AT5G03430.1 | Symbols: | phosphoadenosine phosphosulfate (PAPS... 89.8 1e-16 > AT5G03420.1 | Symbols: | 5'-AMP-activated protein kinase-related | chr5:845641-848914 FORWARD LENGTH=2006 Length=2006 Score = 2130 bits (1153), Expect = 0.0 Identities = 1450/1588 (91%), Gaps = 41/1588 (3%) Strand=Plus/Plus Query 545 ATTCAAGTAACGAGGCTGAAGAACAAGGAAGTTTGAGTAAAGATGAATTTATATCCTCTT 604 ||| |||||| ||||||||| |||||||||||||||||||||||| | | || | Sbjct 452 ATTTAAGTAAGGAGGCTGAAAAACAAGGAAGTTTGAGTAAAGATG-----A-A---TCGT 502 Query 605 CGTCTGACGATGGATTTTTGAGCTTGGAAAACTCCCTTTCTAACTTGGGTGACAGTAATC 664 | ||| | |||| ||||||||||||||||||| |||||||||||||||||||||||| Sbjct 503 C-ACTG--GCTGGAGTTTTGAGCTTGGAAAACTCTTTTTCTAACTTGGGTGACAGTAATC 559 Query 665 ATTCAGGAGAAATCACAGAAAACAATTTT-AAGGTTGAGAGCGTGGAGCTCAATGAGAGA 723 |||||||||||||||||||||| |||||| ||| ||||||| |||||||||||||||| | Sbjct 560 ATTCAGGAGAAATCACAGAAAA-AATTTTCAAGATTGAGAGTGTGGAGCTCAATGAGATA 618 Query 724 GCTGACATTGAAAACTCTTCTTCGGAAGCTTCAATATCTGCAAACTATTCTCAAG-TTGT 782 ||||||||||||||||| || || ||||||||| ||| ||||||| ||||||||| || | Sbjct 619 GCTGACATTGAAAACTCATCGTCTGAAGCTTCAGTATTTGCAAACCATTCTCAAGATT-T 677 Query 783 AGATGATACTTCAAGCCGTCCTACTGACGCAGAAGCTGGCAATGTTTTGATGACAGAGGA 842 | |||||||||||||| || | ||||| |||||| |||||||||| |||||||||||| Sbjct 678 ATATGATACTTCAAGCTGT-C--CTGACATAGAAGCAGGCAATGTTTCGATGACAGAGGA 734 Query 843 TGAGGAGGTCAATGATGTGGACAAAGATTTCTCTCTTACGTTTGATCATTACACCAGTCC 902 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 735 TGAGGAGGTCAACGATGTGGACAAAGATTTCTCTCTTACGTTTGATCATTACACCAGTCC 794 Query 903 TACCTATAATCATTACACTAGTCCAGATCTCAGTTACACCAAACATGTTGACATTGCTAC 962 ||||| |||||||||||||||||||||||||| || || ||||||||||||||||||||| Sbjct 795 TACCTCTAATCATTACACTAGTCCAGATCTCAATTCCATCAAACATGTTGACATTGCTAC 854 Query 963 TGGATCCTCGTATGATTTGACCTCGGAAAATACCATGGCAAATGCAGAGAATTTTCAGAA 1022 |||||||||||||||| ||||||| || ||||||||| |||||| ||||||||||||||| Sbjct 855 TGGATCCTCGTATGATCTGACCTCAGAGAATACCATGACAAATGTAGAGAATTTTCAGAA 914 Query 1023 TCAGCAGATTGATGATATGGCTGAAAATCGTTCTGGTAGTGCTGATGATAGTTTAGTTGA 1082 |||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| Sbjct 915 TCAGCAGATTGATGATATTGCTGCAAATCGTTCTGGTAGTGCTGATGATAGTTTAGTTGA 974 Query 1083 GTTTGAGGATAAGGATTGGATGTCAGGACTTTCTTCTTCCATTTCAATCATAGAAGAAAA 1142 || ||||||||| |||||||||||||| |||||||||| || ||||| |||||||||||| Sbjct 975 GTCTGAGGATAATGATTGGATGTCAGGGCTTTCTTCTTGCACTTCAAGCATAGAAGAAAA 1034 Query 1143 AACAACCAGATTTATACAGAATGGATACTTGGATATAGTTGATGATGATGAAAATGGCAT 1202 ||||||||||||||| ||||||||||||||||||| ||||| || ||||||||||| ||| Sbjct 1035 AACAACCAGATTTATTCAGAATGGATACTTGGATACAGTTGGTGCTGATGAAAATGACAT 1094 Query 1203 ACCTAATGAAAGCTGTCCTGAAGACCCTAAGGAAGATGT-AGAAACAAACAAAGGTGGTG 1261 ||| ||||||||||||||||||| | ||| | | |||||||| ||||||||||| Sbjct 1095 ACCCAATGAAAGCTGTCCTGAAG------A--AAG-T-TCAGAAACAACCAAAGGTGGTG 1144 Query 1262 AGTACATAGGAGACAGT-TATGGTGGTCAGAGAAGTGTCAGTATGCCACTAAATGGAAGT 1320 ||||||||||||||||| | ||| |||| ||||| | | |||| ||||||||||||||| Sbjct 1145 AGTACATAGGAGACAGTCT-TGGAGGTCCGAGAATTATGAGTACACCACTAAATGGAAGT 1203 Query 1321 GCCTTAGCATTGGAGGAGGTTACCCATGCTAAAGAACTTAACAGCTCTGACAGGAATAGT 1380 ||| |||||||| ||||| | | |||||||| |||| |||| |||||||||||||||||| Sbjct 1204 GCCCTAGCATTGAAGGAGATAATCCATGCTACAGAAGTTAATAGCTCTGACAGGAATAGT 1263 Query 1381 GATCAGAGAGATGGGAGTGCTGACCTGGACTCGGATTCACATGATGAGACCAGGAAACGG 1440 ||||||||||||||||||| || | ||||| ||||| ||||| ||||||||||||||||| Sbjct 1264 GATCAGAGAGATGGGAGTGTTGGCTTGGACACGGATCCACATCATGAGACCAGGAAACGG 1323 Query 1441 GAAAATCAGGTTGAAATTGATCGGCTGAGGTTCATGCTGCATCAAAAAGAGCTGGAGTTG 1500 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 1324 GAAAATCAGGTTGAAATTGATCGGCTGAGGTTCATGCTGGATCAAAAAGAGCTGGAGTTG 1383 Query 1501 TCAAGGCTGAAAGAGCAGATTGAAAAGGAAAAGCTCTCTCTTTCAGTTCTCCAAAGACAG 1560 |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| Sbjct 1384 TCAAGGCTGAAAGAGCAGATTGAAAAAGAAAAGCTGTCTCTTTCAGTTCTCCAAAGACAG 1443 Query 1561 GCTGAAACAGAGATCCAAAAGGCCCAAATGCTTATCTCAGAGAAGGAAGTTGAATTGCGA 1620 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 1444 GCTGAAACAGAGATCCAAAAGGCCCAAATGCTTATCTCAGAGAAGGAAGTTGAATTGCAA 1503 Query 1621 GAAGCTGAGGAAAGTCTTTCAGGATTGCAAGAGGTTGTGATTGAATATTGTGGAGATGGT 1680 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 1504 GAAGCTGAGGAAAGTCTTTCAGGATTGCAAGAGGTTGTGATTGAATATTGCGGAGATGGT 1563 Query 1681 AATGTTGTGGAAGTGACTGGTAGCTTCAATGGGTGGCAACACCGAGTGGGAATGGAGCTA 1740 || | ||||||||||||||| || |||||||||||||||||||||||||||||||| ||| Sbjct 1564 AACGCTGTGGAAGTGACTGGCAGTTTCAATGGGTGGCAACACCGAGTGGGAATGGAACTA 1623 Query 1741 CAAGCATCCAAGTCAATCGGGAAACAGAAATGCTGGTCGACATTACTGTGGTTATATCCC 1800 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 1624 CAAGCATCCAAGTCAATAGGGAAACAGAAATGCTGGTCGACATTACTGTGGTTATATCCC 1683 Query 1801 GGTACATATGAGATTAAGTTCATCGTGGACGGGCAATGGATAACGGATCCTCAAAAAGAT 1860 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1684 GGTACATATGAGATAAAGTTCATCGTGGACGGGCAATGGATAACGGATCCTCAAAAAGAT 1743 Query 1861 TCGGTTACAAGAGGGCACATCACAAACAACATTCTCATAGTAGACAGCTGATGATCTCTT 1920 |||||||||||||| || ||| ||||||||||||||| |||||||||| |||||||||| Sbjct 1744 TCGGTTACAAGAGGACATATCTCAAACAACATTCTCAAAGTAGACAGCCAATGATCTCTT 1803 Query 1921 GCTTTTACTGATTTTTCGAGTCGAATTCACTCCAGATAATCGGTGCAGGCTTAAACAGGG 1980 || |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 1804 GCCTTTACTGATTTTTCGAGTCGAATTCACTCCAGATGATCGGTGCAGGCTTAAACAGGT 1863 Query 1981 GAAAAGGAGCAGAGTAAATCATTTCAAAGTTTTATTTTAGCCTCTTCAATTATTTCAAAT 2040 |||||| ||||||| ||| |||||||||| |||||| ||||||||||||| | || | Sbjct 1864 GAAAAG-AGCAGAGCAAAACATTTCAAAGGTTTATT--AGCCTCTTCAATT-T---AAGT 1916 Query 2041 CTAGGATGTTTTGCTTTCATTCTTT-AAGGCTTAGGGATAGACTCTGTACAAAATTGTAA 2099 ||| ||||||||||||| ||||||| ||| |||||||||||||||||||||||||||||| Sbjct 1917 CTACGATGTTTTGCTTTTATTCTTTGAAG-CTTAGGGATAGACTCTGTACAAAATTGTAA 1975 Query 2100 TTTAAGGTAAAATAATACATTTATAAGG 2127 |||||||||||||||||||||||||||| Sbjct 1976 TTTAAGGTAAAATAATACATTTATAAGG 2003 Score = 518 bits (280), Expect = 1e-145 Identities = 401/455 (88%), Gaps = 26/455 (6%) Strand=Plus/Plus Query 1 ATGGCGACGATTTCTCAGAGACCTTTCTCTCTCTCCTTCCCTTCTCTCGAATTTCGGAAA 60 ||||||||||||||||||| |||||||||| |||||||||||| | |||||||||||||| Sbjct 1 ATGGCGACGATTTCTCAGATACCTTTCTCTATCTCCTTCCCTTGTTTCGAATTTCGGAAA 60 Query 61 CCATTGTTATACTATCATCGCCATCATCAACCTCAACTTTTTGTTTCGTACTTGAATTAC 120 |||| | | | ||| | | ||||||| |||||||||||||||||||||||||||| | Sbjct 61 CCATCG-T-T-CTA-C-T----ATCATCAGCCTCAACTTTTTGTTTCGTACTTGAATT-C 110 Query 121 ACGAAGAAGAAGCGTAGTTTTGTCTGTTTCGCTTGTTCCATCAAACAAACCAGAGTTCGT 180 | | |||||||| ||||||| |||||||||| ||||||| ||||||||||||||||||| Sbjct 111 -C-ACGAAGAAGCATAGTTTTATCTGTTTCGCATGTTCCACCAAACAAACCAGAGTTCGT 168 Query 181 AAGAGAGTGAAGAGCGATGAGGAGCTTCGGAGTGAGATTATGGAGTTCGTTGCTTTAGCT 240 ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| ||| Sbjct 169 AAGAGAGTGAAGAGCAATGAGGAGCTTCGGAGTGAGATTATGCAGTTCGTTGCTTTGGCT 228 Query 241 GGGCTTCCTCAAGGTCACGTGCCGTCCATGAAGGAACTCTCGGCACATGGAAGAGTTGAT 300 ||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 229 GGGCTTCCTGAAGGTCACGTGCCGTCCATGAAGGAACTCTCCGCACATGGAAGAGTTGAT 288 Query 301 CTTGCCAACATTGTCAGACGAAGAGGATATAAATTTATCAAGGGACTTGTTGCAAACTC- 359 ||||| |||||||| ||||||||||| |||||||| ||||||| ||||||||||||||| Sbjct 289 CTTGCTAACATTGTAAGACGAAGAGGCTATAAATTCATCAAGGAACTTGTTGCAAACTCT 348 Query 360 GGATATGGATGA---CTGTAACGAGCTAGTC--T--CT--GAG-A-A-TAATACCAACAC 407 || |||||| || |||||||||||||||| | || ||| | | ||||||||||| Sbjct 349 GG-TATGGAGGAAGACTGTAACGAGCTAGTCGCTGACTCTGAGGATAATAATACCAACAT 407 Query 408 TGAAACAGGTGCAAGTGGAGTTTGTTTGGAAGATT 442 ||||||||| | ||| ||| |||||||||||||| Sbjct 408 TGAAACAGGAGGAAGCCGAGCTTGTTTGGAAGATT 442 > AT5G03430.1 | Symbols: | phosphoadenosine phosphosulfate (PAPS) reductase family protein | chr5:848864-853142 REVERSE LENGTH=2019 Length=2019 Score = 89.8 bits (48), Expect = 1e-16 Identities = 48/48 (100%), Gaps = 0/48 (0%) Strand=Plus/Minus Query 2080 GACTCTGTACAAAATTGTAATTTAAGGTAAAATAATACATTTATAAGG 2127 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2019 GACTCTGTACAAAATTGTAATTTAAGGTAAAATAATACATTTATAAGG 1972 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 105471345045 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5