BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg487155 Length=2266 Score E Sequences producing significant alignments: (Bits) Value AT5G03760.1 | Symbols: ATCSLA09, CSLA09, ATCSLA9, CSLA9, RAT4 |... 3456 0.0 > AT5G03760.1 | Symbols: ATCSLA09, CSLA09, ATCSLA9, CSLA9, RAT4 | Nucleotide-diphospho-sugar transferases superfamily protein | chr5:985675-990549 REVERSE LENGTH=2299 Length=2299 Score = 3456 bits (1871), Expect = 0.0 Identities = 2160/2293 (94%), Gaps = 45/2293 (2%) Strand=Plus/Plus Query 1 cacacacacacacacaTACCACTGTGtctcctctctctctgtttctgtttttagatctct 60 |||||||||||||||| | |||||||||| ||||| |||||||||||||||||||||||| Sbjct 5 CACACACACACACACACAACACTGTGTCTTCTCTCCCTCTGTTTCTGTTTTTAGATCTCT 64 Query 61 cttctctcttcttcctttccaaaaatcatcttctccttctccacctttcattatctttct 120 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 65 CTTCTCTCTTCTTTCTTTCCAAAAATCATCTTCTCCTTCTCCACCTTTCATTATCTTTCT 124 Query 121 tctcttACCTAAACCCTTTAAATACAAGaaaaaaaaaaaacacagaaaaaaagaaaaaaa 180 ||||||||| ||||||||||||||| |||||||||| | ||| | | ||||||| Sbjct 125 TCTCTTACCAAAACCCTTTAAATAC------AAAAAAAAAC-TA-AAACACATAAAAAAA 176 Query 181 gaaaTTGAATTCTCCTTTCTCCCGACAATCTGAGTTTTTCAGGCAGAGAAGACAGAGATT 240 | ||||||||||||||| |||||||||||||||||| |||||||||||||||||||||| Sbjct 177 -ATATTGAATTCTCCTTTTTCCCGACAATCTGAGTTTCTCAGGCAGAGAAGACAGAGATT 235 Query 241 TTCACCGTAAGGAGaaaaaaaaaGGGAAAAACTCTGTCTCTCTGTTTCTGTTTCGTCCTT 300 |||||||||||| | |||||| ||||||||||||||||||||||||||||||||||| Sbjct 236 TTCACCGTAAGG-G--CAAAAAA-CGAAAAACTCTGTCTCTCTGTTTCTGTTTCGTCCTT 291 Query 301 -C--GG-TTTGATTTCTTACACCACAAGAGACTTCTTTAAAGAATCTCACATTGTTCCCT 356 | || ||||||||||||||||| ||||||| ||||||||||||||||||||||||||| Sbjct 292 CCTTGGCTTTGATTTCTTACACCAAAAGAGACATCTTTAAAGAATCTCACATTGTTCCCT 351 Query 357 ATTGCGTGTCTCACAAGAAAATCCTT--TATACGGATCTAGGGTT--CT----TG----- 403 ||||| |||||||||||| ||||||| | || || ||| | || || || Sbjct 352 ATTGCTTGTCTCACAAGAGAATCCTTGATCTAGGGTTCT-TGCTTCCCTCCCCTGTTTTT 410 Query 404 --C--T---TCCCTCCCCTGtttt-tttCT-CTCTCGCCGGAGTAAGAAGAAATGGAGCT 454 | | | ||||| ||||||| ||| | ||||| ||||||||||||| |||||||| Sbjct 411 TTCTTTAAATTCCTCCTCTGTTTTCTTTTTGTTCTCGTCGGAGTAAGAAGAGATGGAGCT 470 Query 455 AGGGGACTCGACGACATCGGTGATTCCAGACTCGTTCATGGGATACAGAGACGACATAAC 514 ||| || | ||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 471 AGGAGA-T--ACGACGTCGGTGATTCCAGACTCGTTCATGGGATACAGAGACGACATAAC 527 Query 515 AATGCAAATGTCAATGGTTTTGGATCAGATACGAGCTCCATTGATTGTTCCAGTCCTTAG 574 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 528 AATGCAAATGTCAATGGTTTTGGATCAGATACGAGCTCCATTGATTGTTCCAGCCCTTAG 587 Query 575 GCTCGGTGTTTACATATGTTTAACAATGTCGGTGATGCTCTTTGTCGAAAGGGTTTACAT 634 ||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||||||| Sbjct 588 GCTCGGTGTTTACATCTGTTTGACAATGTCGGTGATGCTCTTTGTTGAAAGGGTTTACAT 647 Query 635 GGGAATAGTAATCTCTCTTGTGAAGCTGTTTGGTCGAAAACCAGATAAACGTTTCAAATA 694 |||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 648 GGGAATTGTTATCTCTCTTGTGAAGCTGTTTGGTCGAAAACCAGATAAACGTTTCAAATA 707 Query 695 TGAACCAATGAAAGACGACATCGAGCTTGGAAACTCTGTTTATCCTATGGTTCTTGTTCA 754 ||||||||| ||||| |||||||||||||||||||||| ||| || ||||||||| |||| Sbjct 708 TGAACCAATCAAAGATGACATCGAGCTTGGAAACTCTGCTTACCCGATGGTTCTTATTCA 767 Query 755 AATCCCAATGTTCAACGAACGAGAGGTTTATCAACTATCTATTGGAGCTGCTTGTGGACT 814 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 768 AATCCCAATGTTCAACGAACGAGAGGTTTATCAACTATCTATTGGAGCTGCTTGTGGACT 827 Query 815 CTCTTGGCCTTCTGATCGAATCGTCATTCAAGTTCTTGATGATTCCACTGATCCAACGAT 874 ||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 828 CTCATGGCCTTCTGATCGAATCGTTATTCAAGTTCTTGATGATTCCACTGATCCAACGAT 887 Query 875 CAAAGATCTAGTGGAGATGGAGTGTAGCAGATGGGCGAGTAAAGGAGTAAACATCAAATA 934 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct 888 CAAAGATCTAGTGGAGATGGAGTGTAGCAGGTGGGCGAGTAAAGGAGTAAACATCAAGTA 947 Query 935 TGAGATCAGAGATAACAGAAAAGGATACAAAGCTGGAGCTTTGAAAGAAGGAATGAAAAA 994 |||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||| || Sbjct 948 TGAGATCAGAGACAACAGAAATGGATACAAAGCAGGAGCTTTGAAAGAAGGAATGAAGAA 1007 Query 995 GAGTTATGTCAAAAGCTGCGATTACGTTGCAATCTTCGACGCTGATTTTCAACCTGAACC 1054 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 1008 GAGTTATGTCAAAAGCTGCGATTACGTTGCAATCTTCGACGCTGATTTTCAACCTGAAGC 1067 Query 1055 GGATTTTCTCTGGAGAACCGTACCGTATCTCCTCCATAACCCAAAGCTTGCTCTTGTTCA 1114 ||||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||| Sbjct 1068 GGATTTTCTATGGAGAACCGTACCGTATCTACTCCATAACCCTAAGCTTGCTCTTGTTCA 1127 Query 1115 AGCTCGCTGGAAATTCGTAAATTCGGATGAATGTTTGATGACAAGGATGCAAGAAATGTC 1174 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1128 AGCTCGCTGGAAATTCGTAAATTCGGATGAATGTTTGATGACAAGGATGCAAGAAATGTC 1187 Query 1175 TTTGGACTATCATTTTACGGTCGAACAAGAAGTTGGTTCTTCTACTTACGCTTTCTTCGG 1234 |||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 1188 TTTGGATTATCATTTTACGGTGGAACAAGAAGTTGGTTCTTCTACTTACGCTTTCTTCGG 1247 Query 1235 ATTCAACGGAACTGCGGGAATATGGAGAATATCGGCACTAAACGAAGCTGGTGGTTGGAA 1294 |||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 1248 ATTCAATGGAACTGCGGGAATATGGAGAATATCGGCATTAAACGAAGCTGGTGGTTGGAA 1307 Query 1295 AGATCGAACGACAGTGGAAGATATGGATTTGGCCGTGAGAGCTAGTCTCAAGGGTTGGAA 1354 |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1308 AGATAGAACGACCGTGGAAGATATGGATTTGGCCGTGAGAGCTAGTCTCAAGGGTTGGAA 1367 Query 1355 ATTCTTGTACCTCGGTTCTTTGAAGGTTAAAAACGAGTTGCCAAGTACATTCAAGGCTTA 1414 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1368 ATTCTTGTACCTCGGTTCTTTGAAGGTTAAAAACGAGTTGCCAAGTACATTCAAGGCTTA 1427 Query 1415 TAGGTATCAACAGCACAGGTGGTCATGTGGTCCAGCCAATCTTTTCAGAAAAATGGCATT 1474 |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| Sbjct 1428 TAGGTATCAACAGCACAGGTGGTCATGTGGTCCAGCTAATCTTTTCAGGAAAATGGCATT 1487 Query 1475 CGAAATCATGACCAATAAGAACGTGACTTTGTGGAAGAAAGTTCATGTGATATATAGCTT 1534 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1488 CGAAATCATGACTAATAAGAACGTGACTTTGTGGAAGAAAGTTCATGTGATATATAGCTT 1547 Query 1535 CTTCGTGGTTAGAAAGCTAGTGGCACACATTGTTACCTTCATCTTCTACTGTGTGATCTT 1594 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1548 CTTCGTGGTTAGAAAGCTAGTGGCACACATTGTTACCTTCATCTTCTACTGTGTGATCTT 1607 Query 1595 ACCCGCTACAGTTCTTGTACCGGAAGTTTCTGTTCCGAAATGGGGAGCGGTTTACATTCC 1654 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 1608 ACCCGCTACAGTTCTTGTACCGGAAGTTACTGTTCCGAAATGGGGAGCGGTTTACATTCC 1667 Query 1655 TTCAGTCATTACTCTCCTCAACGCCGTTGGGACACCAAGGTCACTGCATCTTATGGTGTT 1714 ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| || Sbjct 1668 TTCAGTCATTACTCTCCTCAACGCCGTTGGGACACCAAGGTCATTGCATCTTATGGTCTT 1727 Query 1715 TTGGATTCTGTTCGAGAATGTTATGTCTCTTCACAGAACAAAAGCTACCTTCATCGGTTT 1774 ||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| Sbjct 1728 TTGGATTCTGTTCGAGAATGTGATGTCTCTTCACAGAACAAAAGCTACCTTTATCGGTTT 1787 Query 1775 ACTCGAAGGCGGAAGAGTTAATGAGTGGATTGTTACAGAGAAGCTGGGAGATGTTAAGGC 1834 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1788 ACTCGAAGGAGGAAGAGTTAATGAGTGGATTGTTACAGAGAAGCTGGGAGATGTTAAGGC 1847 Query 1835 TAAATCGGCCACTAAGACTCCAAAGAAGGTTCTTCGTTTTAGATTTGGAGATAGAATTCA 1894 |||||| ||||| |||||| ||||||||||| |||||||||||||||||||||||||||| Sbjct 1848 TAAATCAGCCACCAAGACTTCAAAGAAGGTTATTCGTTTTAGATTTGGAGATAGAATTCA 1907 Query 1895 TGTGTTGGAACTCGGTGTAGGAATGTATCTGTTATTTGTGGGATGTTATGACGCGTTTTT 1954 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1908 TGTGTTGGAACTCGGTGTAGGAATGTATCTGTTATTTGTGGGATGTTATGACGCGTTTTT 1967 Query 1955 TGGGAAGAATCATTATTATCTATACCTTTTCGCGCAAGCAATCGCGTTCTTCATTGCGGG 2014 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 1968 TGGGAAGAATCATTATTATCTATACCTTTTCGCACAAGCAATCGCGTTCTTCATTGCGGG 2027 Query 2015 ATTCGGGCAAATTGGGACAATTGTGCCTAACCATTGAAGGGAAAAAGGAGTTTTTGAGCG 2074 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 2028 ATTCGGGCAAATTGGGACAATTGTGCCTAACCATTGAAGGGAAAAAGGAGTTTTCGAGCG 2087 Query 2075 ACGAAATGCTCGAGAATAAAAAGATGATTTCttttttttctttttGGATTCGCTAGCTAT 2134 ||||| |||||||| |||| |||||||||| |||| |||||||||||||||||||||||| Sbjct 2088 ACGAATTGCTCGAGGATAAGAAGATGATTTGTTTTCTTTCTTTTTGGATTCGCTAGCTAT 2147 Query 2135 TTAAATTCTTGTTGGTGTGAATAGAGAGAATTGATGATATGATTGTTACAGAAGTTGGTG 2194 ||||||||||||||||||||||||||||||||||||||| |||||||||||| | |||| Sbjct 2148 TTAAATTCTTGTTGGTGTGAATAGAGAGAATTGATGATACCATTGTTACAGAAAT-GGTG 2206 Query 2195 TGTGTAGTGTGGAAGATAA-GGATACTTATAGTAAAGAAGAAATATACTTTGAAGGGATT 2253 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| || Sbjct 2207 TGTGTAGTGTGGAAGATAAAGGATACTTATAGTAAAGAAGAAATATACTTTGAAGGTTTT 2266 Query 2254 TTTCCGATTCCTT 2266 |||| |||||||| Sbjct 2267 TTTCAGATTCCTT 2279 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 112449220800 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5