BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg487289 Length=1161 Score E Sequences producing significant alignments: (Bits) Value AT5G05000.2 | Symbols: TOC34, ATTOC34, OEP34 | translocon at th... 1561 0.0 > AT5G05000.2 | Symbols: TOC34, ATTOC34, OEP34 | translocon at the outer envelope membrane of chloroplasts 34 | chr5:1474113-1476019 REVERSE LENGTH=1142 Length=1142 Score = 1561 bits (845), Expect = 0.0 Identities = 963/1020 (94%), Gaps = 8/1020 (1%) Strand=Plus/Plus Query 120 GTAAGGATTTGTGTCCATGGCAGCTTTGCAAACGCCTCGTGAATGGATCGGTATCCAGCA 179 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 36 GTAAGGATTTGTGTCCATGGCAGCTTTGCAAACGCTTCGTGAATGGATCGGTATCCAGCA 95 Query 180 GTTCCCACCTGCTACTCAATCTAAATTGCTCGAGATCCTTGGGAAGTTTAAAGAAGAGGA 239 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 96 GTTCCCACCTGCTACTCAATCTAAATTGCTCGAGATCCTTGGGAAGTATAAAGAAGAGGA 155 Query 240 TGTGAGCTCGCTAACGGTCCTTGTAATGGGCAAAGGCGGTGTTGGAAAGTCATCAACTGT 299 |||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct 156 TGTGAGCTCGCTAACGGTCCTTGTAATGGGGAAAGGTGGTGTTGGAAAGTCATCAACTGT 215 Query 300 GAATTCAGTTATAGGCGAGAAAGCTGCTGCAGTTAGTACTTTCCAGTCTGAAGGACTGAG 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 216 GAATTCAGTTATAGGCGAGAAAGCTGCTGCAGTTAGTACTTTCCAGTCTGAAGGACTGAG 275 Query 360 GCCTACCTTGGTCTCCCGCTCAAGATCGGGATTTACATTGAATATCATCGACACTCCTGG 419 ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct 276 GCCTACCTTGGTCTCTCGCACAAGATCGGGATTTACATTGAATATCATCGACACTCCTGG 335 Query 420 TCTTATTGAGGGGGGATATGTGAATGATCAAGCCATCAACATTATAAAACGATTCCTCCT 479 |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 336 TCTTATTGAGGGAGGATATGTGAATGATCAAGCCATCAACATTATAAAACGATTTCTCCT 395 Query 480 CAACATGACTATAGATGTGCTACTATATGTAGACCGTTTGGATGTATATAGGGTGGATGA 539 ||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||| Sbjct 396 CAACATGACTATAGATGTGCTACTATACGTAGACCGTTTGGATGTGTACCGGGTGGATGA 455 Query 540 CCTTGATAGGCAAGTTGTCAGTGCTATAACCGATGCATTTGGAAAAGAGATATGGAAAAA 599 ||||||||||||||||||| |||||||||| ||||||||||| |||||||||||||| || Sbjct 456 CCTTGATAGGCAAGTTGTCGGTGCTATAACTGATGCATTTGGTAAAGAGATATGGAAGAA 515 Query 600 GTCTGCTCTTGTTCTCACACATGCTCAGTTCTCTCCGCCAGACGGGTTAAATTATAATCG 659 |||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| | Sbjct 516 GTCTGCTCTTGTTCTCACCCATGCTCAGTTCTCTCCACCAGACGGGTTAAATTATAACCA 575 Query 660 CTTTGTCTCCAGAAGATCTGATGCTCTTCTAAAAGTTATCC-GTACAGGCGCCCAACTGA 718 ||||||||||| ||||||| ||||||||||||||||||||| | |||||||| ||||||| Sbjct 576 CTTTGTCTCCAAAAGATCTAATGCTCTTCTAAAAGTTATCCAG-ACAGGCGCTCAACTGA 634 Query 719 AGAAACAGGATTTGCAGGGTTCATCTACACCCATCATTCTTGTTGAGAACAGCGGAAGAT 778 ||||||||||||||||||||| |||| || ||||||||||||||||||||||||||| Sbjct 635 AGAAACAGGATTTGCAGGGTTTTTCTATTCCTGTCATTCTTGTTGAGAACAGCGGAAGAT 694 Query 779 GTCATAAAAATGACAA-CGATGAAAAGATTCTTCCA-GACGGGACTAGCTGGATTCCCAA 836 | ||||| || || || ||||||||||||||||||| | ||||||||| ||||||||||| Sbjct 695 GCCATAAGAACGA-AAGCGATGAAAAGATTCTTCCATG-CGGGACTAGTTGGATTCCCAA 752 Query 837 TCTACTCAACACAATCACAGAGATCTCTTTTAACGGCAACAAGGCGATTCACGTTGACAA 896 ||| |||||| ||||||||||||||||||||| ||||||||||||||||| |||||||| Sbjct 753 TCTGTTCAACAAAATCACAGAGATCTCTTTTAATGGCAACAAGGCGATTCATGTTGACAA 812 Query 897 GAAACTGGTGGAAGGGCCAAACCCAAATC-AAAGAGGAAAGAGACTGATTCCTTTGATCT 955 ||||||||| ||||||||||||||||| | |||||||||| | |||||||||||| || | Sbjct 813 GAAACTGGTCGAAGGGCCAAACCCAAA-CGAAAGAGGAAAAAAACTGATTCCTTTAATGT 871 Query 956 TTGCATTCCAGTACTTGTTGGTGATGAAGCCATTGGTTCGAGCAATCAAGTCCGATGTTA 1015 |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 872 TTGCATTCCAATACTTGCTGGTGATGAAGCCATTGGTTCGAGCAATCAAGTCCGATGTTT 931 Query 1016 CTAGAGAGAGTAAACCGGCGTGGGAGCTGCGGGACTCCGGTTTAGCAAGTCGAAGGTCTT 1075 | ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 932 CGAGAGAGAGTAAACCGGCGTGGGAGCTGCGAGACTCCGGTTTAGCAAGTCGAAGGTCTT 991 Query 1076 GAGTTGTTGACACGAGTTTTGTTTGGTTTGTTTGTCTATCTGAGAGATTGTTCTGTAGTT 1135 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 992 GAGTTGTGGACACGAGTTTTGTTTGGTTTGTTTGTCTATCTGAGAGATTGTTCTGTAGTT 1051 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 56977618575 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5