BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg487429
Length=2746
Score E
Sequences producing significant alignments: (Bits) Value
AT5G06220.2 | Symbols: | LETM1-like protein | chr5:1879937-188... 2161 0.0
AT3G11560.2 | Symbols: | LETM1-like protein | chr3:3639435-364... 922 0.0
AT5G06230.1 | Symbols: TBL9 | TRICHOME BIREFRINGENCE-LIKE 9 | c... 414 2e-114
AT3G11570.1 | Symbols: TBL8 | TRICHOME BIREFRINGENCE-LIKE 8 | c... 231 2e-59
> AT5G06220.2 | Symbols: | LETM1-like protein | chr5:1879937-1885643
FORWARD LENGTH=3119
Length=3119
Score = 2161 bits (1170), Expect = 0.0
Identities = 1276/1327 (96%), Gaps = 7/1327 (1%)
Strand=Plus/Plus
Query 1422 TTTGGCAGTAACAAAAGCGGGTTTTATTGACATGAACTCATCCTCAACTGATGGAGAGTC 1481
|||||| |||||| ||||| ||||||||||||||| ||||||||||||||||||||||||
Sbjct 1798 TTTGGCTGTAACAGAAGCGAGTTTTATTGACATGACCTCATCCTCAACTGATGGAGAGTC 1857
Query 1482 AAGCTCATTTGACAAGGCTCTAGAGAGTGTAGATGAAGCTCTCGTGAGACTGGAAAGCTT 1541
||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||
Sbjct 1858 AAGCTCATTTGACAAGGCTCTAGAGAGTGTAGATGGAGCTCTCGTTAGACTGGAAAGCTT 1917
Query 1542 GCTACAGAAATTGCATGCATCAAGCTCAGCTTCTGGAAAGGAACAAATAAAAGCTGCTTG 1601
||||||| | |||||||||||||||||| |||||||||| || |||||||||||||||||
Sbjct 1918 GCTACAGCAGTTGCATGCATCAAGCTCATCTTCTGGAAAAGAGCAAATAAAAGCTGCTTG 1977
Query 1602 CTCTGACCTAGAAAAAATAAGGAAGCTCAAGAAAGAGGCTGAATTTTTAGAGGCATCTTT 1661
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1978 CTCTGACCTAGAAAAGATAAGGAAGCTCAAGAAAGAGGCTGAATTTTTAGAGGCATCTTT 2037
Query 1662 CAGAGCCAAAGCAGCTTCCCTCCAAGAGGGAGGTGGTGACAGTGACTCTCAGGAGTACTC 1721
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2038 CAGAGCCAAAGCAGCTTCCCTCCAAGAGGGAGGTGGTGACAGTGACTCTCAGGAGTACTC 2097
Query 1722 TGAGGAACAAAGCCAGTATCTAAAAGGAAAAGACTCAAAGAATTCAATAAATTCTGTAGA 1781
||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||
Sbjct 2098 TGAGGAACAAAGCCAGTATCTAAGAGGAAAAGACCCAAAGAATTCAATAAATTCTGTAGA 2157
Query 1782 TCAAGGCACAAATAGGGATCGTGGATTCTGGGGGTTCTTTGTTCGCACTCCAAGAA-GGA 1840
||||||||| | |||||| ||||||||||||||||||||||||| ||||||| || |||
Sbjct 2158 TCAAGGCAC--A-AGGGATAGTGGATTCTGGGGGTTCTTTGTTCGTACTCCAA-AAGGGA 2213
Query 1841 AGCCTGGCCCCGAGTCATTGACAGATGAATATTTTGAGAAATCCAGAGAAAATGTTGATA 1900
|||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||
Sbjct 2214 AGCCTGGCCCCGAGTCATTGACAGATAAATATTTTGAGAAATCCAGAGAAAATGTAGATA 2273
Query 1901 GTGTGGATTCCAACCCCAATGAGATCTATCGGTTCGAACTTCTAAGGAACGAACTGATAG 1960
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2274 ATGTGGATTCCAACCCCAATGAGATCTATCGGTTCGAACTTCTAAGGAACGAACTGATAG 2333
Query 1961 AGCTGGAGAAGCGTGTCCAAGGAAGCACAAATGAGTCGGGACGAACCTCTGAAGATCTTC 2020
||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| |
Sbjct 2334 AGCTGGAGAAGCGTGTCCAAGGAAGTACAGATGAGTCGGGACGAACCTCTGAAGATCTGC 2393
Query 2021 CTAAATTAAGCAGCAGTATGAAAGGTGTGCAGTTGGTTCAGAGCTCAAAGAAAGAAAGCG 2080
|||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| ||
Sbjct 2394 CTAAATCAAGCAGCAGTACGAAAGGTGTGCAGTTGGTTCAGAGCTCAAAGAAAGAAAACG 2453
Query 2081 TCATTGAGAAAACTCTTGACCAACTTAAAGAAACCAGTACGGACGTGTGGCAAGGTACTC 2140
||||||||||||||||||||||||||||||| ||| ||||||||||||||| |||||||
Sbjct 2454 TCATTGAGAAAACTCTTGACCAACTTAAAGATGCCACTACGGACGTGTGGCAGGGTACTC 2513
Query 2141 AGCTTCTTGCGTTTGATTCAGCTGCTGCTATGGAGCTCCTTCGGAGGTCTGTGGTAGGAG 2200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2514 AGCTTCTTGCGTTTGATTCAGCTGCTGCTATGGAGCTCCTTCGGAGGTCTGTGGTAGGAG 2573
Query 2201 ATGAATTAACAGAGAAAGAGAAGAAAGCCCTACGCAGAACCATGACTGACTTAGCATCAG 2260
||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||
Sbjct 2574 ATGAATTAACAGAGAAAGAAAAGAAAGCACTACGCAGAACCATGACCGACTTAGCATCAG 2633
Query 2261 TTGTTCCCATTGGTGTTCTTATGCTTCTTCCTGTCACAGCAGTTGGTCATGCGGCTATGC 2320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2634 TTGTTCCCATTGGTGTTCTTATGCTTCTTCCTGTCACAGCAGTTGGTCATGCGGCTATGC 2693
Query 2321 TTGCTGCAATTCAGAGATATGTGCCAGGCTTGATACCTTCGACCTACGGAGCCGAAAGGT 2380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2694 TTGCTGCAATTCAGAGATATGTGCCAGGCTTGATACCTTCGACCTACGGAGCCGAAAGGT 2753
Query 2381 TGAACCTGTTGAGACAGCTCGAGAAGGTCAAGCAAATGCAAACAAATGAAACAGAGCCTG 2440
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 2754 TGAACCTGTTGAGACAGCTCGAGAAGGTCAAGCAAATGCAAACAAATGAAACTGAGCCTG 2813
Query 2441 AAGAAGGCATTGATGATAC-AGAATCATGACTAGATCAAGAAACATAAATTCAGTCTATA 2499
|||||||||||||||| || ||||||||||||||||||||||||||||| ||||| | ||
Sbjct 2814 AAGAAGGCATTGATGA-ACCAGAATCATGACTAGATCAAGAAACATAAAATCAGTATTTA 2872
Query 2500 CCTTAAGAAATCACTTTGTTCTATAGTTCATTGACAAGAGTTGCGCATAGAGAATCTCAT 2559
||| ||| |||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 2873 CCTCAAGGAATCACTTTGTTCTATAGTTCATTGACAAGAGTTGCGCATAGAGGATCTCAT 2932
Query 2560 TCCATGTATCTGGTACGCCCGGTAGGCACCAGTGGCTACAGTCTTGAGGAACATCAACAG 2619
|||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct 2933 TCCATGTATCTGGTACACCGGGTAGGCACCAGTGGCTACAGTCTTGAGGAACATCAACAG 2992
Query 2620 AAGTGCCTTGCTCTCGATACCGAGAAATATGACCATCTTTCCTGAACTCTGTCAGATATG 2679
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 2993 AAGTGCCTTGCTCTCGATACCGAGAAATATGACCATCTTTCCTAAACTCTGTCAGATATG 3052
Query 2680 TAATGTTCAGAAACTTAAGCTTACTATGTCGATATCTCATTTCTTCAATTACTTTATAGA 2739
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 3053 TAATGTTCAGAAACTTAACCTTACTATGTCGATATCTCATTTCTTCAATTACTTTATAGA 3112
Query 2740 CATATTC 2746
||||||
Sbjct 3113 TATATTC 3119
Score = 1930 bits (1045), Expect = 0.0
Identities = 1224/1306 (94%), Gaps = 29/1306 (2%)
Strand=Plus/Plus
Query 1 ATGTCCGTTGGAACCTTTATTTCCTGCAGAAGAGTGCTACAATTGGATTATATTTCTAGC 60
||||||||||||||||| ||||| ||||||||||||||||||||||||||||| || | |
Sbjct 170 ATGTCCGTTGGAACCTTGATTTCGTGCAGAAGAGTGCTACAATTGGATTATATATCAAAC 229
Query 61 TGCTGCGGAAATTCGAGGAGTCAGTTGTTTGTGACCTATCATGTTCTGGACAACAAGAAC 120
|||||||||||||| |||| ||| |||||||||||| | ||| | | | ||||||
Sbjct 230 TGCTGCGGAAATTCCAGGACTCAATTGTTTGTGACC--T-ATG--AT-G---ATAAGAAC 280
Query 121 TACTTTCTTCAGAGAAAACTTTTTGGAAACAAGAAGATGAGTTGGTATAAATCGCGGAGG 180
||||||||||||||||||||||||||||||||||| |||| | | || ||||||
Sbjct 281 TACTTTCTTCAGAGAAAACTTTTTGGAAACAAGAAAATGA----G--T---TCACGGAGG 331
Query 181 ACTATGCAGTCTTTTCTCCTTGCATCTGCTGAAGACGGAGTCGCTGTTAATGGGGGTTCC 240
|||| ||| ||||||||||||||||||||||||| ||||| ||||||||| ||
Sbjct 332 ACTACCCAGCCTTTTCTCCTTGCATCTGCTGAAGATGGAGTGGCTGTTAAT---GG---- 384
Query 241 CAGTCAAGACCCAGCGATGATGTTGAGGAGATGAGGG-CAATACTCAGTGGATCACTACA 299
||||||| | |||||||||||| |||||||||||| ||| ||||||||||||||||||
Sbjct 385 --GTCAAGAGCTAGCGATGATGTTCAGGAGATGAGGGCCAA-ACTCAGTGGATCACTACA 441
Query 300 AGATGAATACAGCTGTGGTGAACTCATTCAATCTTTGCATGATGCTGCCAGAACTTTTGA 359
||||||||| |||||||||||||| ||||| |||||||||||||||||||| ||||||||
Sbjct 442 AGATGAATATAGCTGTGGTGAACTTATTCAGTCTTTGCATGATGCTGCCAGGACTTTTGA 501
Query 360 ACTGGCACTTAAAGAGAAGATTTCATCTTCCAGATTACCATGGTTTTCAGCAGCCTGGCT 419
|||||| |||||||||||||| || ||||| |||||||||||||||||||||||||||||
Sbjct 502 ACTGGCTCTTAAAGAGAAGATATCTTCTTCGAGATTACCATGGTTTTCAGCAGCCTGGCT 561
Query 420 GGGAGTTGATAGAAATGCATGGGTTAAGACATTTTCTTATCAGGCTTCCGTGTATTGCTT 479
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 562 CGGAGTTGATAGAAATGCATGGGTTAAGACGTTTTCTTATCAGGCTTCCGTGTATTGCTT 621
Query 480 ACTACAAGCTGCAAATGAGGTTTCATCTAGAGGAAACAATAGAGACGATGATCTTAATGT 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 622 ACTACAAGCTGCAAATGAGGTTTCATCTAGAGGAAACAATAGAGACGATGATCTTAATGT 681
Query 540 CTTTGTGCAAAGGAGTTTATCACGCCAAGCTGCTCCTCTTGATAGTATGATGCGGGATAA 599
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 682 CTTTGTACAAAGGAGTTTATCACGCCAAGCTGCTCCTCTTGATAGTATGATGCGGGATAA 741
Query 600 ACTATCTTCCAGTCATCCTGAAGCCAATGAGTGGTTTTGGTCTGAGCAAGTTCCTTCGGC 659
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 742 ACTATCTTCCAGTCATCCTGAAGCCAATGAGTGGTTTTGGTCTGGGCAAGTTCCTTCGGC 801
Query 660 GGTGACATCTTTTGTGAATTGTTTTGAGGGGGACCAACGATTTGTTTCTGCAACTTCTGT 719
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 802 GGTGACATCTTTTGTGAATTGTTTTGAGGGGGACCAACGATTTGTTTCTGCTACTTCTGT 861
Query 720 CTATGTCAAAGGCAAGTCCTCAGCTGCAAGCAATGAGATTGAGGTGTCACTTCTCATGCT 779
|||||||||| |||| ||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 862 CTATGTCAAAAGCAATTCCACAGCTGCAAGCAATGAGATTGAGGTGTCACTTCTCATGCT 921
Query 780 TGTGCTGAATTGCATCGCAGCAGTGACAAAACTTGGCCCGACAAAAATTTCGTGCCCGCC 839
||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||
Sbjct 922 TGTGCTGAATTGCATCGCAGCAGTGACAAAACTTGGCCCAACAAAACTTTCGTGCCCGCC 981
Query 840 CTTCTTTTCTGTGATTCCAGATACTACAGGGAGATTGATGGACAAATTTGTTGACTTTGT 899
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 982 CTTCTTTTCTGTGATTCCAGATACTACAGGGAGATTGATGGACAAATTTGTTGGGTTTGT 1041
Query 900 TCCACTACCTCAGGCCTATCATTCAATGAAAAGCCTCGGTCTTCGCAGAGAATTTCTTGT 959
|||||| |||||| |||||||||||||||||| ||| ||||||||||||||||||||| |
Sbjct 1042 TCCACTTCCTCAGACCTATCATTCAATGAAAACCCTTGGTCTTCGCAGAGAATTTCTTCT 1101
Query 960 TCATTTTGGACCTCGGGCAGCGGCATGCAGAGTAAAAAGTGACTGCGGTACAGATGAGGT 1019
||||||||||||||||||||| ||||||||||||||||||||||| | ||||||||||||
Sbjct 1102 TCATTTTGGACCTCGGGCAGCAGCATGCAGAGTAAAAAGTGACTGTGATACAGATGAGGT 1161
Query 1020 TGTCTTCTGGGTCGATCTTATACAAAACCAACTGCTGAGGGCTATTGATCGGGAGAAAAT 1079
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1162 TGTCTTCTGGGTAGATCTTATACAAAACCAACTGCTGAGGGCTATTGATCGGGAGAAAAT 1221
Query 1080 ATGGTCAAGATTAACAACGTCTGAAAGTATCGAGGTTTTGGAAAGAGATTTAGCTATTTT 1139
|||||||||||||| ||||||||||||||| ||||||||||| |||||||||||||||||
Sbjct 1222 ATGGTCAAGATTAATAACGTCTGAAAGTATAGAGGTTTTGGATAGAGATTTAGCTATTTT 1281
Query 1140 TGGATTCTTCATTGCCTTGGGCAGGAGCACCCAGTCTTTTTTAGCTGCAAATGGTTTCAG 1199
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1282 TGGATTCTTCATTGCCTTGGGCAAGAGCACCCAGTCTTTTTTAGCTGCAAATGGTTTCAG 1341
Query 1200 TTCGCTGGAGAATCCTGTGGAAGACCTTGTTAGGCACTTCATTGGGGGAAGTCTCCTACA 1259
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1342 TTCGCTGGAGAATCCTGTGGAAGACCTTGTTAGGCACTTCATTGGGGGAAGTCTCCTACA 1401
Query 1260 ATATCCTCAGCTTTCAGCCATCAGTTCTTACCAGTTGTATGTAGAG 1305
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1402 ATATCCTCAGCTTTCAGCCATCAGTTCTTACCAGTTGTATGTAGAG 1447
Score = 124 bits (67), Expect = 4e-27
Identities = 71/73 (97%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 1304 AGAGCTTTATTAAGTACAGCAAATGGCCTGAGAATCCTTCTAATGTCAAGGCCGCGAAAT 1363
|||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||
Sbjct 1602 AGAGCTTTATTAAGTACAGCAAATGGCCTGAGAATCCTTCTAATGTCAAGGCAGCAAAAT 1661
Query 1364 TCTTATCCAAGGG 1376
|||||||||||||
Sbjct 1662 TCTTATCCAAGGG 1674
> AT3G11560.2 | Symbols: | LETM1-like protein | chr3:3639435-3645812
FORWARD LENGTH=3043
Length=3043
Score = 922 bits (499), Expect = 0.0
Identities = 1045/1301 (80%), Gaps = 67/1301 (5%)
Strand=Plus/Plus
Query 1460 CATCCTCAACTGATGGAGAGTC-AAGCTCATTTGACAAGGCTCTAGAGAGTGTAGATGAA 1518
|||| |||| || | ||||||| || ||||||||||||||| ||||| |||||||||||
Sbjct 1716 CATCATCAATTGTTAGAGAGTCGAA-CTCATTTGACAAGGCCCTAGAAAGTGTAGATGAG 1774
Query 1519 GCTCTCGTGAGACTGGAAAGCTTGCTACAGAAATTGCATGCATCAAGCTCAGCTTCTGGA 1578
|| ||||| |||||||||||| |||||||| | ||| ||| ||||| |||| | ||||||
Sbjct 1775 GCCCTCGTTAGACTGGAAAGCCTGCTACAGGAGTTGTATGTATCAAACTCATCGTCTGGA 1834
Query 1579 AAGGAACAAATAAAAGCTGCTTGCTCTGACCTAGAAAAAATAAGGAAGCTCAAGAAAGAG 1638
||||||||||||||||| || |||||||||||||| |||||| ||||||| |||||||||
Sbjct 1835 AAGGAACAAATAAAAGCCGCGTGCTCTGACCTAGAGAAAATACGGAAGCTTAAGAAAGAG 1894
Query 1639 GCTGAATTTTTAGAGGCATCTTTCAGAGCCAAAGCAGCTTCCCTCCAAGAGGGAGGTGGT 1698
||||||||| | |||||| ||||||||||||||||||||||| | ||| |||||||||
Sbjct 1895 GCTGAATTTCTGGAGGCAACTTTCAGAGCCAAAGCAGCTTCCTTGCAACAGGGAGGTGAC 1954
Query 1699 GACAGTGACTCTCAGGAGTACT-CTGAGGAACAAAGCCAGTATCTAAAAGGAAAAGACTC 1757
| | ||| ||||| || | || | |||| ||||| | |||| | ||||| |||||| |
Sbjct 1955 AAAAATGATTCTCAAGAATCCTAC-GAGGTACAAAAACGGTATTTTAAAGGGAAAGACAC 2013
Query 1758 AAAGAATTC-AATAAATTCTGTA-GATCAAGGCACAAA-TAGGGA-TCGTGGATTCTGGG 1813
|||||| | ||| | ||||| | |||||||||| ||| || | ||||||||||||||
Sbjct 2014 AAAGAACGCAAAT-AGTTCTG-AGGATCAAGGCA-AAAGTA-TAAGTCGTGGATTCTGGG 2069
Query 1814 GGTTCTTTGTTC-GCACTCCAA-GAAGGAAGCCTGGCCCCGAGTCATTGACAGATGAATA 1871
| |||||||| | || || ||| ||| ||||| || || |||| || | |||||||||
Sbjct 2070 GATTCTTTGTACGGC-CTTCAAGGAA-GAAGCTTGATCCTGAGTTATCGGGAGATGAATA 2127
Query 1872 TTTTGAGAAATCCAG-AGAAAATGTTGATAGTGTGGATTC-CAACCCCAA-TGAGATCTA 1928
| ||| ||||||||| |||| | | ||| | || || || |||| ||||||| |
Sbjct 2128 TATTGGGAAATCCAGTGGAAACT-TACTTAGCATAGACTCGGAA--CCAATTGAGATC-A 2183
Query 1929 -TCGGTTCGAACTTCTAAGGAACGAACTGATAGAGCTGGAGAAGCGTGTCCAAGGAAGCA 1987
|| |||||| ||||||||||||| || ||||| || || ||||| ||| || ||||||
Sbjct 2184 GCCGATTCGAAATTCTAAGGAACGAGCTAATAGAACTCGAAAAGCGGGTCAAAAGAAGCA 2243
Query 1988 C--A--A---A-T-GA-GTCG-GG-ACGAACCTCTGAAGAT-CTTCCTAAATTAAGCAGC 2034
| | | | | || | | || | || |||||| ||| | ||| ||| ||||||
Sbjct 2244 CTGATCAGTCAGTAGATGAGGAGGAATTAATCTCTGAGGATAC-ACCTCAATCAAGCAGT 2302
Query 2035 AGTA-TGAAAGGTGTGCAGTTGGTTCAGAGCT-CAAAGAAAGAAAGCGTCATTGAGAAAA 2092
|| | |||| |||| ||||||||||||| || | ||||| |||| | | || |||||||
Sbjct 2303 AGAACGGAAA-GTGTTCAGTTGGTTCAGA-CTCCCAAGAAGGAAAACATGATGGAGAAAA 2360
Query 2093 CTCTTGACCAA-CTTAA-AGAAACCAGTACGGACGTGTGGCAAGGTACTCAGCTTCTTGC 2150
||||| | || | ||| |||| ||| ||||||||||||||||||||||| ||||||||
Sbjct 2361 CTCTTCA-AAAGC-TAAGAGAAGCCACCACGGACGTGTGGCAAGGTACTCAACTTCTTGC 2418
Query 2151 GTTTGATTCAGCTGCTGCTA-TGGAGCTCCTTCGGAGGTCTGTGGTAGGAGATGAATTAA 2209
|||||||||| ||||| | || |||| |||||||||||| || | || ||||||||||
Sbjct 2419 CATTGATTCAGCAGCTGC-AGTGCAGCTACTTCGGAGGTCTCTGATTGGTGATGAATTAA 2477
Query 2210 CA-GAGAAAGAGAAGAAAGCCCTACGCAGAACCATGACTGACTTAGCATCAGTTGTTCCC 2268
|| || ||||| ||||||||||| |||||||||||||||||| | || |||||| |||||
Sbjct 2478 CAGGA-AAAGAAAAGAAAGCCCTGCGCAGAACCATGACTGACCTGGCGTCAGTTATTCCC 2536
Query 2269 ATTGGTGTTCTTATGCTTCTTCCTGTCACAGCAGTTGGTCATGCGGCTATGCTTGCTGCA 2328
|| ||| |||| |||||||||||||| ||||| |||||||| || || ||||| |||| |
Sbjct 2537 ATCGGTATTCTAATGCTTCTTCCTGTTACAGCGGTTGGTCACGCTGCCATGCTGGCTGGA 2596
Query 2329 ATTCAGAGATATGTGCCAGGCTTGATACCTTCGACCTACGGAG-CCGAAAGGTTGAACCT 2387
|||||||||||||| |||||| |||| ||||| || ||||| | ||||||||||||||||
Sbjct 2597 ATTCAGAGATATGTACCAGGCCTGATTCCTTCCACATACGG-GTCCGAAAGGTTGAACCT 2655
Query 2388 GTTGAGACAGCTCGAGAAGGTCAAGCAAATGCAAACAAATGAAA-C-AGAGCCTGAAGAA 2445
||||||||||| ||||| ||||| || ||||||||||||||| | |||| | ||||||
Sbjct 2656 ATTGAGACAGCTTGAGAAAATCAAGGAACTGCAAACAAATGAAACCGAGAG-C-GAAGAA 2713
Query 2446 GGCATTGATGATACAGAATCATGACTAGATCAAGAAACATAAATTCAGTC-TATACCTTA 2504
||| | || || | || || |||| |||| | ||| || | | | || | | |||| |
Sbjct 2714 GGCGTAGAGGAAATAGCATTATGAGTAGA--AGGAAGCA-ATA-T-AGACTTGTACC-T- 2766
Query 2505 AGAAATCACTTTGTTCTATAGTTCATTGACAAGAGTTGCGCATAGAGAATCTCATTCCAT 2564
| ||||||||||| || ||||||| ||| || ||||||||||||||||| ||||||
Sbjct 2767 -CTATTCACTTTGTTCGGTAATTCATTGCCAAAAGCTGCGCATAGAGAATCTCGTTCCAT 2825
Query 2565 GTATCTGGTACGCCCGGTAGGCACCAGTGGCTACAGTCTTGAGGAACATCAACAGAAGTG 2624
|| || ||||| || |||| ||||||||| || |||||||||||| |||| ||| |||
Sbjct 2826 GTGTCCGGTACTCCGGGTAAGCACCAGTGACTGCAGTCTTGAGGAGCATCTTCAGGAGTT 2885
Query 2625 CCTTGCTCTCGATACCGAGAAATATGACCATCTTTCCTGAACTCTGTCAGATATGTAATG 2684
|| | ||||||||||| ||| |||| |||||||||||||||| |||||||||||||||
Sbjct 2886 CCCGGTTCTCGATACCGCGAAGGATGAGCATCTTTCCTGAACTCGGTCAGATATGTAATG 2945
Query 2685 TTCAGAAACTTAAGCTTACTATGT-CGATATCTCATTTCTT 2724
||||||||||||| |||||||||| | ||||||||||||||
Sbjct 2946 TTCAGAAACTTAACCTTACTATGTTC-ATATCTCATTTCTT 2985
> AT5G06230.1 | Symbols: TBL9 | TRICHOME BIREFRINGENCE-LIKE 9 |
chr5:1884928-1887121 REVERSE LENGTH=1656
Length=1656
Score = 414 bits (224), Expect = 2e-114
Identities = 240/248 (97%), Gaps = 0/248 (0%)
Strand=Plus/Minus
Query 2499 ACCTTAAGAAATCACTTTGTTCTATAGTTCATTGACAAGAGTTGCGCATAGAGAATCTCA 2558
|||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1303 ACCTCAAGGAATCACTTTGTTCTATAGTTCATTGACAAGAGTTGCGCATAGAGGATCTCA 1244
Query 2559 TTCCATGTATCTGGTACGCCCGGTAGGCACCAGTGGCTACAGTCTTGAGGAACATCAACA 2618
||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct 1243 TTCCATGTATCTGGTACACCGGGTAGGCACCAGTGGCTACAGTCTTGAGGAACATCAACA 1184
Query 2619 GAAGTGCCTTGCTCTCGATACCGAGAAATATGACCATCTTTCCTGAACTCTGTCAGATAT 2678
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1183 GAAGTGCCTTGCTCTCGATACCGAGAAATATGACCATCTTTCCTAAACTCTGTCAGATAT 1124
Query 2679 GTAATGTTCAGAAACTTAAGCTTACTATGTCGATATCTCATTTCTTCAATTACTTTATAG 2738
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1123 GTAATGTTCAGAAACTTAACCTTACTATGTCGATATCTCATTTCTTCAATTACTTTATAG 1064
Query 2739 ACATATTC 2746
| ||||||
Sbjct 1063 ATATATTC 1056
Score = 111 bits (60), Expect = 3e-23
Identities = 60/60 (100%), Gaps = 0/60 (0%)
Strand=Plus/Minus
Query 2293 GTCACAGCAGTTGGTCATGCGGCTATGCTTGCTGCAATTCAGAGATATGTGCCAGGCTTG 2352
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1482 GTCACAGCAGTTGGTCATGCGGCTATGCTTGCTGCAATTCAGAGATATGTGCCAGGCTTG 1423
Score = 67.6 bits (36), Expect = 6e-10
Identities = 36/36 (100%), Gaps = 0/36 (0%)
Strand=Plus/Minus
Query 2352 GATACCTTCGACCTACGGAGCCGAAAGGTTGAACCT 2387
||||||||||||||||||||||||||||||||||||
Sbjct 1335 GATACCTTCGACCTACGGAGCCGAAAGGTTGAACCT 1300
> AT3G11570.1 | Symbols: TBL8 | TRICHOME BIREFRINGENCE-LIKE 8 |
chr3:3645022-3647542 REVERSE LENGTH=1905
Length=1905
Score = 231 bits (125), Expect = 2e-59
Identities = 186/216 (86%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 2510 TCACTTTGTTCTATAGTTCATTGACAAGAGTTGCGCATAGAGAATCTCATTCCATGTATC 2569
||||||||||| || ||||||| ||| || ||||||||||||||||| |||||||| ||
Sbjct 1498 TCACTTTGTTCGGTAATTCATTGCCAAAAGCTGCGCATAGAGAATCTCGTTCCATGTGTC 1439
Query 2570 TGGTACGCCCGGTAGGCACCAGTGGCTACAGTCTTGAGGAACATCAACAGAAGTGCCTTG 2629
||||| || |||| ||||||||| || |||||||||||| |||| ||| ||| || |
Sbjct 1438 CGGTACTCCGGGTAAGCACCAGTGACTGCAGTCTTGAGGAGCATCTTCAGGAGTTCCCGG 1379
Query 2630 CTCTCGATACCGAGAAATATGACCATCTTTCCTGAACTCTGTCAGATATGTAATGTTCAG 2689
||||||||||| ||| |||| |||||||||||||||| ||||||||||||||||||||
Sbjct 1378 TTCTCGATACCGCGAAGGATGAGCATCTTTCCTGAACTCGGTCAGATATGTAATGTTCAG 1319
Query 2690 AAACTTAAGCTTACTATGT-CGATATCTCATTTCTT 2724
|||||||| |||||||||| | ||||||||||||||
Sbjct 1318 AAACTTAACCTTACTATGTTC-ATATCTCATTTCTT 1284
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 136403918017
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5