BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg487463 Length=2580 Score E Sequences producing significant alignments: (Bits) Value AT5G06530.2 | Symbols: | ABC-2 type transporter family protein... 4008 0.0 > AT5G06530.2 | Symbols: | ABC-2 type transporter family protein | chr5:1989747-1994824 REVERSE LENGTH=2788 Length=2788 Score = 4008 bits (2170), Expect = 0.0 Identities = 2380/2482 (96%), Gaps = 11/2482 (0%) Strand=Plus/Plus Query 100 AGTTTTAGGAAACGTCATAATGTCAATGGAAAAGCCACCGTTGGCCTCCGGTTTAGCTCG 159 |||||| | ||| |||| |||||||||||| |||||||| |||||||||||||||||||| Sbjct 201 AGTTTTTGAAAAGGTCAAAATGTCAATGGAGAAGCCACCTTTGGCCTCCGGTTTAGCTCG 260 Query 160 AACACGATCGGAGCAGCTATATGAGACGGTGGCAGCAGCCATCAGGTCACCTCACGGCTC 219 |||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||||||| Sbjct 261 AACACGATCGGAGCAGCTATATGAGACGGTTGCAGCAGACATAAGGTCACCTCACGGCTC 320 Query 220 CATGGACGCTAATGGTGTGCCTGCGACGGCTCCAGCAGCCGTTGGAGGAGGAGGGACCTT 279 |||||||||||||||||||||||||||||||||||||||||||||||||||||| || || Sbjct 321 CATGGACGCTAATGGTGTGCCTGCGACGGCTCCAGCAGCCGTTGGAGGAGGAGGAACGTT 380 Query 280 ATCGAGGAAATCAAGCCGGAGGCTGATGATGGGGGCT-TCTCCGGGGAGGAGTGGCGGAG 338 ||||||||||||||||||||| | |||| |||| | ||||||||||||||| |||| | Sbjct 381 GTCGAGGAAATCAAGCCGGAGG-T--TGAT-GGGGATGTCTCCGGGGAGGAGTAGCGGCG 436 Query 339 CCGGAACGCATATAAGGAAGTCTAGGAGCGCTCAGCTTAAGCTCGAGCTAGAAGAAGTGA 398 ||||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 437 CCGGAACACACATAAGGAAGTCTAGGAGCGCTCAGCTTAAGCTCGAGCTAGAGGAAGTGA 496 Query 399 GCAGTGGCGCTGCTCTGAGTCGTGCATCGAGCGCGTCGCTCGGGCTTTCCTTTTCCTTCA 458 | || ||||| ||| |||| ||||| || ||||| |||||||| ||||| |||||||||| Sbjct 497 GTAGCGGCGCAGCTTTGAGCCGTGCGTCTAGCGCATCGCTCGGTCTTTCATTTTCCTTCA 556 Query 459 CCGGGTTTGCTATGCCGCCGGAGGAAATCTCCGACTCGAAACCGTTCAGCGACGACGAGA 518 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 557 CCGGGTTTGCTATGCCGCCGGAGGAAATCTCCGACTCTAAACCGTTCAGCGACGACGAGA 616 Query 519 TGATACCCGAAGATATTGAAGCGGGAAAGAAGAAGCCTAAGTTTCATGCAGAACCAACAT 578 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 617 TGATACCCGAAGATATTGAAGCGGGAAAGAAGAAGCCTAAGTTTCAAGCAGAACCAACAT 676 Query 579 TGCCCATCTTTCTCAAGTTCAGGGATGTTACATACAAAGTGGTGATCAAGAAATTGACTT 638 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 677 TGCCCATCTTTCTCAAGTTCAGGGATGTTACATACAAAGTGGTGATCAAGAAATTGACTT 736 Query 639 CTTCAGCGGAAAAAGAGATATTAACTGGGATAAGTGGGAGTGTGAGTCCTGGTGAAGTTC 698 | || | ||| |||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 737 CATCTGTGGAGAAAGAGATATTAACTGGGATAAGTGGGAGTGTGAATCCTGGTGAAGTTC 796 Query 699 TTGCTCTCATGGGACCTTCAGGGAGTGGCAAAACAACTCTTCTTAGCTTACTCGCTGGAC 758 |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| | Sbjct 797 TTGCTCTCATGGGACCCTCAGGGAGTGGCAAAACAACTCTTCTTAGCTTACTTGCTGGTC 856 Query 759 GAATCTCTCAATCCTCTACTGGAGGCTCTGTTACTTACAACGACAAGCCTTACTCTAAAT 818 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 857 GAATCTCTCAATCCTCTACTGGAGGCTCTGTTACTTACAACGACAAGCCTTACTCTAAAT 916 Query 819 ACTTGAAAAGCAAGATTGGGTTTGTGACTCAAGATGATGTTTTGTTTCCTCATCTTACCG 878 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 917 ACTTGAAAAGCAAGATTGGGTTTGTGACTCAAGATGATGTTCTGTTTCCTCATCTTACCG 976 Query 879 TGAAAGAAACGCTAACCTACGCTGCTCGTTTGCGCTTACCAAAGACTCTTACGAGAGAGC 938 ||||||||||||||||||| ||||||||| |||||||||| ||||||||||||||||||| Sbjct 977 TGAAAGAAACGCTAACCTATGCTGCTCGTCTGCGCTTACCCAAGACTCTTACGAGAGAGC 1036 Query 939 AGAAGAAGCAACGAGCTTTAGACGTTATTCAAGAGTTGGGTTTGGAGAGGTGCCAAGACA 998 |||||||||||||||||||||||||||| |||||||||||||| ||||| |||||||||| Sbjct 1037 AGAAGAAGCAACGAGCTTTAGACGTTATCCAAGAGTTGGGTTTAGAGAGATGCCAAGACA 1096 Query 999 CTATGATTGGAGGAGCATTCGTGCGTGGTGTATCAGGTGGAGAGAGGAAAAGAGTTTCTA 1058 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1097 CTATGATTGGTGGAGCATTCGTGCGTGGTGTATCAGGTGGAGAGAGGAAAAGAGTTTCTA 1156 Query 1059 TTGGAAACGAGATCATCATTAATCCTTCTCTATTACTTCTTGATGAGCCAACCTCTGGTT 1118 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 1157 TTGGAAACGAGATCATCATTAATCCTTCTCTATTACTTCTTGATGAACCAACCTCTGGTT 1216 Query 1119 TAGATTCCACCACTGCTCTTAGAACCATTCTGATGCTCCACGATATCGCCGAGGCGGGGA 1178 |||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| Sbjct 1217 TAGATTCCACCACTGCTCTTAGAACCATTCTGATGCTCCATGACATCGCCGAGGCGGGGA 1276 Query 1179 AAACAGTGATCACAACGATACATCAGCCCTCGAGTAGGCTCTTCCATAGATTTGACAAGC 1238 |||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 1277 AAACCGTGATCACAACGATACATCAGCCCTCGAGTAGGCTCTTCCATAGGTTTGACAAGC 1336 Query 1239 TGATTCTACTAGGAAGAGGAAGTCTTCTCTACTTTGGAAAATCATCAGAAGCTTTGGATT 1298 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 1337 TGATTCTACTAGGAAGAGGAAGTCTTCTCTACTTTGGAAAATCATCAGAAGCTTTAGATT 1396 Query 1299 ACTTCTCTTCTATTGGATGCTCTCCTCTTATCGCCATGAATCCTGCAGAGTTTTTGCTCG 1358 |||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 1397 ACTTCTCTTCCATTGGATGCTCTCCTCTTATCGCCATGAATCCTGCAGAGTTCTTGCTCG 1456 Query 1359 ATCTCGCCAACGGTAACATCAATGATATCTCTGTGCCTTCTGAGTTAGATGACAGAGTTC 1418 |||| ||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||| Sbjct 1457 ATCTTGCCAACGGTAACATCAACGATATCTCTGTACCTTCTGAGTTAGATGATAGAGTTC 1516 Query 1419 AAGTTGGCAATTCAGGCAGAGAAACTCAAACTGGCAAGCCATCTCCTGCTGCTGTTCATG 1478 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 1517 AAGTTGGCAATTCAGGTAGAGAAACTCAAACTGGCAAGCCATCTCCTGCTGCTGTTCATG 1576 Query 1479 AGTATCTAGTGGAGGCATACGAGACTCGGGTTGCAGAACAGGAGAAGAAGAAACTATTGG 1538 |||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| Sbjct 1577 AGTATCTAGTGGAGGCCTACGAGACTAGGGTTGCAGAACAGGAGAAGAAGAAACTATTGG 1636 Query 1539 ATCCTGTGCCACTCGACGAAGAAGCTAAGGCCAAAAGTACGCGCCTAAAGCGCCAATGGG 1598 |||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| Sbjct 1637 ATCCTGTGCCACTCGATGAAGAAGCTAAGGCCAAAAGTACGCGTCTAAAGCGCCAATGGG 1696 Query 1599 GAGCGGGCTGGTGGGAGCAATATTGCATACTGTTCTGCAGAGGACTCAAAGAACGGCGAC 1658 || || ||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 1697 GAACGTGCTGGTGGGAGCAATATTGCATACTATTCTGCAGAGGACTCAAAGAACGGCGAC 1756 Query 1659 ACGAATACTTCAGTTGGTTGCGTGTTACTCAAGTTCTTTCCACAGCTGTCATTTTAGGTC 1718 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 1757 ACGAATACTTCAGTTGGTTGCGTGTTACGCAAGTTCTTTCCACAGCTGTCATTTTAGGTC 1816 Query 1719 TTCTCTGGTGGCAGTCGGACATTCGGACTCCAATGGGACTACAAGATCAGGCCGGTTTGC 1778 ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||| Sbjct 1817 TTCTCTGGTGGCAGTCGGACATTAGGACTCCAATGGGACTACAAGATCAGGCTGGTTTGC 1876 Query 1779 TCTTCTTCATAGCAGTTTTTTGGGGATTCTTCCCTGTTTTCACAGCAATCTTTGCGTTTC 1838 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 1877 TCTTCTTCATAGCAGTTTTTTGGGGATTCTTCCCTGTTTTCACAGCGATCTTTGCGTTTC 1936 Query 1839 CGCAAGAGCGAGCGATGTTGAATAAGGAGAGAGCAGCAGATATGTACAGATTAAGCGCAT 1898 ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| Sbjct 1937 CGCAAGAGCGAGCGATGTTAAATAAGGAGAGAGCAGCGGATATGTACAGATTAAGCGCAT 1996 Query 1899 ATTTCCTAGCTCGAACCACGAGTGATCTCCCTCTCGACTTTATTCTACCTTCTCTCTTCC 1958 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1997 ATTTCCTAGCTCGAACCACGAGTGATCTCCCTCTCGACTTTATTCTACCTTCTCTCTTCC 2056 Query 1959 TTCTCGTCGTCTATTTCATGACAGGTCTTCGGATTAGCCCATATCCCTTCTTCTTGAGCA 2018 |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 2057 TTCTTGTCGTCTATTTCATGACAGGTCTTCGGATCAGCCCATATCCCTTCTTCTTGAGCA 2116 Query 2019 TGCTAACAGTTTTCCTTTGCATCATTGCAGCTCAGGGACTGGGACTTGCAATTGGTGCCG 2078 |||| |||||||||||||||||||| |||||||||||||| |||||||||||||||||| Sbjct 2117 TGCTCACAGTTTTCCTTTGCATCATCGCAGCTCAGGGACTCGGACTTGCAATTGGTGCCA 2176 Query 2079 TTTTAATGGATTTAAAGAAGGCTACAACTTTGGCTTCAGTAACTGTCATGACATTCATGC 2138 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 2177 TTTTAATGGATTTAAAGAAGGCTACGACTTTGGCTTCAGTAACTGTCATGACATTCATGC 2236 Query 2139 TCGCCGGAGGATTCTTTGTCAAGAAAGTGCCGGTTTTCATATCGTGGATACGTTATCTAT 2198 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 2237 TCGCCGGAGGATTCTTCGTCAAGAAAGTGCCGGTTTTCATATCGTGGATACGTTATCTAT 2296 Query 2199 CTTTCAATTACCACACCTACAAGCTTCTTCTTAAAGTACAATATCAGGACTTCGCTGAAT 2258 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 2297 CTTTCAATTACCACACCTACAAGCTTCTTCTTAAAGTACAATATCAGGACTTCGCTGTGT 2356 Query 2259 CCATCAACGGGATGAGAATAGACAATGGACTAACTGAAGTAGCCGCACTCGTTGTCATGA 2318 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 2357 CCATCAACGGGATGAGAATAGACAACGGACTAACTGAAGTAGCCGCACTCGTTGTCATGA 2416 Query 2319 TTTTCGGTTACCGCCTCCTCGCATATCTGTCTCTAAGGCAAATGAAGATAGCAACATAAC 2378 | |||||||| ||||||||||| |||||||||||||||||||||||||| | |||||||| Sbjct 2417 TATTCGGTTATCGCCTCCTCGCGTATCTGTCTCTAAGGCAAATGAAGATCGTAACATAAC 2476 Query 2379 CCATTTTCCACACGAAGAAATCAAATAACATAGAAGAAGCACTAAGACATAAAGAGTGCG 2438 ||||||||||||||||||||||||||||||||||||||||| ||| | | | |||||| Sbjct 2477 CCATTTTCCACACGAAGAAATCAAATAACATAGAAGAAGCA-TAA-A-A-A--GAGTGCA 2530 Query 2439 TCAGATCTTGATGATCTTGACACGACCAAGCCTTGACAATGATTAAGAGATTGGTCCTAA 2498 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 2531 TCAGATCTTGATGATCTTGACACGACCAATCCTTGACAATGATTAAGAGATTGGTCCTAA 2590 Query 2499 GATTATTCTTTCTTAATTACAAAGGTGTTGTGAGTTTGATAATGATTGGATGGTGATAGA 2558 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2591 GATTATTCTTGCTTAATTACAAAGGTGTTGTGAGTTTGATAATGATTGGATGGTGATAGA 2650 Query 2559 TGTCTTGATTGGAGATAAATAT 2580 |||||||||||||||||||||| Sbjct 2651 TGTCTTGATTGGAGATAAATAT 2672 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 128076205479 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5