BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg487470 Length=3842 Score E Sequences producing significant alignments: (Bits) Value AT5G06600.1 | Symbols: UBP12 | ubiquitin-specific protease 12 |... 6312 0.0 AT3G11910.1 | Symbols: UBP13 | ubiquitin-specific protease 13 |... 3657 0.0 > AT5G06600.1 | Symbols: UBP12 | ubiquitin-specific protease 12 | chr5:2019107-2027943 REVERSE LENGTH=3898 Length=3898 Score = 6312 bits (3418), Expect = 0.0 Identities = 3743/3892 (96%), Gaps = 53/3892 (1%) Strand=Plus/Plus Query 1 GATTGTATTTCTCCCT-AGAGTCACTTTGCCTCT-TCTTTGATTTTTCTCTGCATCGTCG 58 |||||||||||||||| ||||||||||||||| | ||||||||||||||||| ||||||| Sbjct 1 GATTGTATTTCTCCCTAAGAGTCACTTTGCCTTTGTCTTTGATTTTTCTCTGTATCGTCG 60 Query 59 GTCTCTCTTTTGCCTTTCTCGATCCCACCGTCAAATCCTTCTCCGGCCAATGACTATGAT 118 ||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 61 GTCTCTCTTTTGCGTTTCTCGATCCCACCGTCTAATCCTTCTCCGGCCAATGACTATGAT 120 Query 119 GACTCCGCCTCCCGTTGATCAGCCAGAAGATGAGGAGATGCTTGTGCCGAATTCAGATTT 178 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 GACTCCGCCTCCCGTTGATCAGCCAGAAGATGAGGAGATGCTTGTGCCGAATTCAGATTT 180 Query 179 GGTCGACGGTCCTGCTCAGCCCATGGAAGTTACCCAACCCGAGACTGCTGCGAGTACTGT 238 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 181 GGTCGACGGTCCTGCTCAGCCCATGGAAGTTACCCAACCCGAGACTGCTGCGAGTACTGT 240 Query 239 GGAGAACCAGCCAGCTGAGGATCCTCCTACTCTGAAATTCACGTGGACTATCCCTAATTT 298 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 241 GGAGAACCAGCCAGCTGAGGATCCTCCTACTCTGAAATTCACGTGGACTATCCCTAATTT 300 Query 299 CTCTAGGCAAAACACCAGGAAGCATTACTCCGATGTATTTGTCGTTGGAGGTTACAAATG 358 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 301 CTCTAGGCAAAACACCAGGAAGCATTACTCCGATGTATTTGTCGTTGGAGGTTACAAATG 360 Query 359 GCGCATATTAATTTTCCCGAAAGGGAACAATGTTGATCATTTGTCCATGTACTTGGATGT 418 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 361 GCGCATATTAATTTTCCCGAAAGGGAACAATGTTGATCATTTGTCCATGTACTTGGATGT 420 Query 419 TTCTGATGCTGCGAGTTTGCCGTACGGATGGAGCAGATATGCTCAGTTCAGTCTGGCTGT 478 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 421 TTCTGATGCTGCGAGTTTGCCGTACGGTTGGAGCAGATATGCTCAGTTCAGTCTGGCTGT 480 Query 479 AGTCAATCAAATCCACTCCAGATATACCATTAGAAAGGAGACGCAACATCAATTCAATGC 538 |||||||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||| Sbjct 481 AGTCAATCAAATCCACACCAGATATACCGTTAGAAAAGAGACGCAACATCAATTCAATGC 540 Query 539 TAGAGAAAGCGATTGGGGATTTACATCATTCATGCCTCTAAGTGAACTTTATGATCCTAG 598 |||||||||||||||||||||||||||||||||||| || || ||||||||||||||||| Sbjct 541 TAGAGAAAGCGATTGGGGATTTACATCATTCATGCCACTTAGCGAACTTTATGATCCTAG 600 Query 599 TAGAGGATATTTAGCGAATGATACTGTTTTGGTTGAAGCTGAAGTCGCTGTACGTAAGGT 658 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 601 TAGAGGATATTTAGTGAATGATACTGTTTTGGTTGAAGCTGAAGTCGCTGTACGTAAGGT 660 Query 659 TCTTGATTACTGGTCATATGACTCTAAAAAAGAGACTGGTTTTGTTGGACTCAAGAACCA 718 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 661 TCTTGATTACTGGTCATATGACTCTAAAAAAGAGACTGGTTTTGTTGGACTCAAGAACCA 720 Query 719 AGGTGCAACTTGTTACATGAATTCTCTCCTACAGACACTATACCACATACCTTACTTCAG 778 ||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 721 AGGTGCAACATGCTACATGAATTCTCTCCTACAGACACTATACCACATACCTTACTTCAG 780 Query 779 AAAGGCTGTATACCACATGCCGACAACTGAGAACGATTTACCCACAGCAAGTATACCTTT 838 ||||||||||||||||||||| ||||||||||| ||| |||||||||||||||||| || Sbjct 781 AAAGGCTGTATACCACATGCCAACAACTGAGAATGATGCACCCACAGCAAGTATACCGTT 840 Query 839 GGCTCTCCAAAGTTTGTTTTACAAGCTCCAATATAATGACACTAGTGTTGCAACAAAGGA 898 ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || Sbjct 841 GGCTCTCCAAAGTTTGTTTTACAAGCTCCAATACAATGACACTAGTGTTGCAACAAAAGA 900 Query 899 GCTGACAAAGTCTTTTGGTTGGGATACATATGATTCCTTTATGCAACATGATGTGCAAGA 958 |||||||||||| |||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct 901 GCTGACAAAGTCGTTTGGTTGGGATACATATGATTCCTTCATGCAGCATGATGTGCAAGA 960 Query 959 ACTCAATCGGGTTCTCTGCGAAAAGCTTGAGGACAAAATGAAGGGAACTGTTGTGGAGGG 1018 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 961 ACTCAATCGGGTTCTCTGCGAAAAGCTTGAGGACAAAATGAAGGGAACTGTTGTGGAGGG 1020 Query 1019 AACAATACAACAACTATTTGAGGGCCACCATATGAATTATATTGAGTGCATAAATGTAGA 1078 ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| Sbjct 1021 AACAATACAACAACTTTTTGAGGGCCACCATATGAATTACATTGAGTGCATAAATGTAGA 1080 Query 1079 TTTCAAATCGACACGGAAAGAATCATTTTACGACCTTCAGCTGGATGTGAAAGGCTGCAA 1138 ||| ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 1081 TTTTAAATCTACACGGAAAGAATCATTTTACGACCTTCAGCTGGATGTTAAAGGCTGCAA 1140 Query 1139 GGATGTTTATGCTTCTTTTGACAAGTATGTTGAAGTTGAACGTCTTGAAGGAGATAACAA 1198 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 1141 GGATGTTTATGCTTCTTTTGACAAGTATGTTGAAGTTGAACGTCTTGAAGGAGACAACAA 1200 Query 1199 ATATCATGCAGAAGGACATGGTTTACAGGATGCaaaaaaaGGTGTTCTTTTCATTGACTT 1258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1201 ATATCATGCAGAAGGACATGGTTTACAGGATGCAAAAAAAGGTGTTCTTTTCATTGACTT 1260 Query 1259 TCCACCGGTTCTTCAACTCCAGCTCAAGAGGTTTGAATATGACTTTATGAGGGACACCAT 1318 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1261 TCCACCGGTTCTTCAACTCCAGCTCAAGAGGTTTGAATATGACTTTATGAGGGACACCAT 1320 Query 1319 GGTAAAGATAAACGATCGGTATGAGTTTCCTCTTGAACTGGATCTTGATAGAGAAAATGG 1378 ||| |||||||| ||||||||||||||||| |||||||||||||||||||||||| |||| Sbjct 1321 GGTGAAGATAAATGATCGGTATGAGTTTCCGCTTGAACTGGATCTTGATAGAGAAGATGG 1380 Query 1379 AAAGTATCTGTCTCCTGATGCTGACAGGAGTGTCCGCAACCTTTATACTCTTCACAGTGT 1438 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1381 AAAGTATCTGTCGCCTGATGCTGACAGGAGTGTCCGCAACCTTTATACTCTTCACAGTGT 1440 Query 1439 CTTAGTTCATAGTGGAGGAGTACATGGTGGGCACTATTACGCTTTTATAAGACCTACGCT 1498 |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| Sbjct 1441 TTTAGTTCATAGTGGAGGAGTACATGGTGGGCACTATTATGCTTTTATAAGGCCTACGCT 1500 Query 1499 CTCAGATCAGTGGTATAAATTTGATGATGAACGCGTAACAAAGGAAGATTTGAAAAGGGC 1558 ||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| Sbjct 1501 CTCAGATCAGTGGTATAAATTTGATGATGAACGAGTAACCAAGGAAGATTTGAAAAGGGC 1560 Query 1559 ATTGGAGGAGCAATATGGTGGTGAAGAAGAGCTACCACAGACTAATCCTGGTTTCAATAA 1618 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1561 TTTGGAGGAGCAATATGGTGGTGAAGAAGAGCTACCACAGACTAATCCTGGTTTCAATAA 1620 Query 1619 ---CCCTCCTTTCAAATTCACAAAGTACTCGAATGCTTACATGCTTGTTTATATCCGGGA 1675 ||||||||||||||||||||||||||||||||||||||||||||| |||||||| || Sbjct 1621 TAACCCTCCTTTCAAATTCACAAAGTACTCGAATGCTTACATGCTTGTATATATCCGAGA 1680 Query 1676 AAGTGACAAGGATAAAATAATCTGCAACGTTGATGAGAAAGACATAGCAGAACATTTAAG 1735 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1681 AAGTGACAAAGATAAAATAATCTGCAACGTTGATGAGAAAGACATAGCAGAACATTTAAG 1740 Query 1736 GGTGAGGCTaaagaaagagcaagaagaaaaggaagataaaagaagaTACAAGGCACAAGC 1795 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1741 GGTGAGGCTAAAGAAAGAGCAAGAAGAAAAGGAAGATAAAAGAAGATACAAGGCACAAGC 1800 Query 1796 TCACCTATATACAATAATTAAGGTTGCAAGAGATGAAGATCTTAAGGAACAAATCGGGAA 1855 |||| ||||||| |||||||||||||||||||||||||| |||||||||||||| ||||| Sbjct 1801 TCACTTATATACCATAATTAAGGTTGCAAGAGATGAAGACCTTAAGGAACAAATTGGGAA 1860 Query 1856 GGATATATATTTTGATCTTGTGGACCATGACAAAGTTCGCAGTTTCCGTATCCAGAAACA 1915 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 1861 GGATATATATTTTGATCTTGTGGATCATGACAAAGTTCGCAGTTTCCGTATCCAGAAACA 1920 Query 1916 GACACCATTTCAACAGTTTAAGGAGGAGGTAGCCAAAGAATTTGGTGTACCTGTTCAGTT 1975 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 1921 GACACCATTTCAACAGTTTAAGGAGGAGGTAGCAAAAGAATTTGGTGTACCTGTTCAGTT 1980 Query 1976 ACAGAGGTTCTGGATTTGGGCTAAGCGACAAAACCATACCTATCGTCCCAATCGCCCCCT 2035 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct 1981 ACAGAGGTTCTGGATTTGGGCAAAGAGACAAAACCATACCTATCGTCCCAATCGCCCCCT 2040 Query 2036 TACGCCTCAAGAGGAATTACAACAGGTTGGACAAATAAGAGAAGCATCTAACAAGGCAAA 2095 ||||||||||||||||||||||| ||||||||||||||| ||||||||||| |||||||| Sbjct 2041 TACGCCTCAAGAGGAATTACAACCGGTTGGACAAATAAGGGAAGCATCTAATAAGGCAAA 2100 Query 2096 CACTGCAGAACTAAAGCTTTTCCTGGAAGTAGAGCACCTGGATTTACGTCCTATTCCTCC 2155 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 2101 CACTGCAGAACTCAAGCTTTTTTTGGAAGTAGAGCACCTGGATTTACGTCCTATTCCTCC 2160 Query 2156 TCCTGAAAAATCAAAAGAAGATATTCTGCTTTTCTTTAAGCTTTATGACCCCGAGAAGGC 2215 ||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct 2161 TCCTGAAAAATCAAAAGAAGATATTCTTCTTTTCTTCAAGCTTTATGACCCCGAGAAGGC 2220 Query 2216 AGTATTAAGCTATGCAGGCAGGCTGATGGTGAAAAGTTCCAGTAAGCCTATGGATATAAC 2275 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 2221 AGTATTAAGCTATGCTGGCAGGCTGATGGTGAAAAGTTCCAGTAAGCCTATGGATATAAC 2280 Query 2276 TGGAAAACTTAATGAAATGGTTGGCTTTGCTCCTGATGAAGAAATAGAACTTTTTGAGGA 2335 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2281 TGGAAAACTGAATGAAATGGTTGGCTTTGCTCCTGATGAAGAAATAGAACTTTTTGAGGA 2340 Query 2336 AATCAAGTTTGAACCTTGTGTTATGTGCGAACACTTGGATAAGAAAACTTCATTCAGATT 2395 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2341 AATCAAGTTTGAACCTTGTGTTATGTGCGAACACTTGGATAAGAAAACTTCATTCAGATT 2400 Query 2396 GTGTCAAATTGAAGATGGAGACATCATTTGCTTTCAGAAACCTCTAGTTAACAAGGAGAT 2455 ||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| Sbjct 2401 GTGTCAAATTGAAGATGGAGATATCATTTGCTTTCAGAAACCTCTTGTTAACAAGGAGAT 2460 Query 2456 TGAGTGCCGCTACCCAGCTGTGCCTTCGTTTCTTGAATATGTCCAGAACAGACAGCTGGT 2515 ||| |||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 2461 TGAATGCCTCTACCCAGCTGTGCCTTCGTTTCTTGAATATGTCCAGAATAGACAGCTGGT 2520 Query 2516 CCGGTTTCGTGCTCTGGAAAAACCTAAAGAAGATGAGTTTGTTCTGGAGTTGTCGAAGCT 2575 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2521 CCGGTTTCGTGCTCTGGAAAAACCTAAAGAAGATGAGTTTGTTCTGGAGTTGTCGAAGCA 2580 Query 2576 GCACACTTATGACGATGTTGTGGAAAAAGTGGCTGAGAAGCTTGGTCTTGACGATCCATC 2635 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 2581 GCACACTTATGACGATGTTGTGGAGAAAGTGGCTGAGAAGCTTGGTCTTGACGATCCATC 2640 Query 2636 CAAACTTAGGCTTACATCTCACAATTGCTATTCCCAGCAACCTAAGCCTCAGCCTATCAA 2695 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 2641 CAAACTTAGGCTTACATCTCACAATTGCTATTCCCAGCAACCCAAGCCTCAGCCTATCAA 2700 Query 2696 ATACCGTGGAGTAGACCATTTGTCAGATATGTTAGTTCACTACAATCAGACGTCTGACAT 2755 |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 2701 GTACCGTGGAGTAGACCATTTGTCAGATATGTTAGTTCATTACAATCAGACGTCTGACAT 2760 Query 2756 TTTGTATTATGAAGTTCTGGACATTCCTCTTCCAGAATTGCAAGGTCTTAAAACCTTAAA 2815 |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| Sbjct 2761 TTTGTATTATGAAGTTCTGGACATCCCTCTTCCAGAATTACAAGGTCTTAAAACCTTAAA 2820 Query 2816 AGTTGCTTTCCATCATGCCACGAAGGAAGAAGTGGTAATCCACAATATCAGACTACCTAA 2875 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2821 AGTTGCTTTCCATCATGCCACGAAGGAAGAAGTGGTAATCCACAATATCAGACTACCTAA 2880 Query 2876 ACAAAGCACGGTCGGAGATGTTATTAATGAACTTAAAACAAAGGTGGAGCTTTCGCATCC 2935 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2881 ACAAAGCACGGTCGGAGATGTTATTAATGAACTTAAAACAAAGGTGGAGCTTTCGCATCC 2940 Query 2936 AGATGCAGAACTGAGATTGCTCGAGGTGTTTTACCACAAGATCTACAAGATTTTCCCATC 2995 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2941 AGATGCAGAACTGAGATTGCTCGAGGTGTTTTACCACAAGATCTACAAGATTTTCCCATC 3000 Query 2996 AACTGAAAGAATTGAGAATATAAATGACCAGTACTGGACTTTACGAGCTGAGGAGATTCC 3055 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3001 AACTGAAAGAATTGAGAATATAAATGACCAGTACTGGACTTTACGAGCTGAGGAGATTCC 3060 Query 3056 GGAAGAAGAGAAGAATATCGGTCCAAATGATCGCTTAATTCTTGTGTACCATTTTGCTAA 3115 |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || Sbjct 3061 GGAAGAAGAGAAGAATATTGGTCCAAATGATCGCTTAATTCTTGTGTACCATTTTGCCAA 3120 Query 3116 GGAGACTGGACAAAATCAGCAAGTGCAAAACTTTGGCGAGCCCTTCTTCTTGGTAATCCA 3175 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 3121 GGAGACTGGACAAAACCAGCAAGTGCAAAACTTTGGCGAGCCCTTCTTCTTGGTAATCCA 3180 Query 3176 TGAAGGTGAAACTCTTGAAGAAATAAAGAACCGTATCCAAAAGAAGCTTCATGTATCCGA 3235 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct 3181 TGAAGGTGAAACTCTTGAAGAAATCAAGAACCGTATCCAAAAGAAGCTTCATGTATCTGA 3240 Query 3236 TGAGGACTTTGCCAAGTGGAAGTTTGCGTTTATGTCAATGGGGCGTCCAGAGTACTTACA 3295 ||| || ||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct 3241 TGAAGATTTTGCCAAGTGGAAGTTTGCGTTCATGTCAATGGGGCGTCCAGAGTACTTGCA 3300 Query 3296 GGACACAGATGTTGTTTATAATCGCTTTCAGAGAAGAGATGTCTATGGTGCTTTTGAGCA 3355 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 3301 GGACACAGATGTTGTTTATAATCGCTTCCAGAGAAGAGATGTCTATGGTGCTTTTGAGCA 3360 Query 3356 GTACCTCGGGTTGGAGCATGCTGACACTACTCCTAAGAGGGCTTATGCTGCAAACCAGAA 3415 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3361 GTACCTCGGGTTGGAGCATGCTGACACTACTCCTAAGAGGGCTTATGCTGCAAACCAGAA 3420 Query 3416 CCGCCACGCTTACGAGAAGCCGGTGAAAATATACAATTAGCCCCA------GA------- 3462 |||||| ||||||||||||||||| |||||||||||||||||||| || Sbjct 3421 CCGCCATGCTTACGAGAAGCCGGTAAAAATATACAATTAGCCCCAAAACATGAACACAAA 3480 Query 3463 -G--A-----CATTGTGGCAGCAACGTTGGACCAAGGCATTGATTGGACCAATGCATCGA 3514 | | |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3481 TGTCAGGAGACATTGTGGCAGCAACGTTGGACCAAGGCATTGATTGGACCAATGCATCGA 3540 Query 3515 ATAAGGAGGGAAAGAGAGAGTGTGAGGGTGTGATGATGACCGTAGGATGTTGTAGAGAAT 3574 ||||| |||||||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct 3541 ATAAGAAGGGAAAGGGCGAGTGTGAGGGTGTGATGATGACCGTAGGATGTTGTAGAGAAT 3600 Query 3575 CTGGTCTGATAGGGTTTTGGGTTGCGCATTGATAGTGGTGTGTTTTCTATTTTT--CTTT 3632 |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 3601 CTGGTCTGATAGGGTTTTGGGTTGCGCATTGATAGTGGTGTGTTTTCTATTTTTTTCTTT 3660 Query 3633 -CG-TG---C-TT---------C-------AATACTTTTGTGTTAATATCTGGAATGTGT 3670 | | | || | |||||||| ||||||||||||||||||||| Sbjct 3661 TCAATCTATCCTTATTTTATTTCGTGCTTCAATACTTT-GTGTTAATATCTGGAATGTGT 3719 Query 3671 GAAGACCATTGGCACATGCAATTTTTATTTTCCaaaaaaaaaTATATGGAAGCCCTTCGC 3730 ||||||||||| |||||||||||||||||||||||||||| | ||||||||||||||||| Sbjct 3720 GAAGACCATTG-CACATGCAATTTTTATTTTCCAAAAAAAGA-ATATGGAAGCCCTTCGC 3777 Query 3731 TTGGATTCGGGAGCGCGGTTTGGCTTTCAGAGTTAATAGAATACCGAAACATTTGTAATT 3790 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 3778 TTGGATTCGGGAGCGCGGTTTGGCTTTCAGAGTTTATAGAATACCGAAACATTTGTAATT 3837 Query 3791 TTAGAGATTGGGGTTTAAGAAGATTTTTGACTGAGGAAATTTGCATTCTTTT 3842 |||||||||| |||||||||||||||||||||||||| ||||| |||||||| Sbjct 3838 TTAGAGATTGTGGTTTAAGAAGATTTTTGACTGAGGAGATTTGTATTCTTTT 3889 > AT3G11910.1 | Symbols: UBP13 | ubiquitin-specific protease 13 | chr3:3761388-3770413 REVERSE LENGTH=3841 Length=3841 Score = 3657 bits (1980), Expect = 0.0 Identities = 2983/3463 (86%), Gaps = 86/3463 (2%) Strand=Plus/Plus Query 35 CTTTGATT-TT-TCTCTGCATCGTCGGTCTCTCTTTTGCCTT-TCTCGATCCCACCGTCA 91 |||| ||| || |||||| ||| | | ||||||| | ||| ||||||||| ||||| Sbjct 53 CTTTCATTGTTCTCTCTG-TTCGGC-G-CTCTCTTCT-ACTTCTCTCGATCCGACCGT-G 107 Query 92 AATC-CTTCTCCGG-CCAATGACTATGATGACTCCGCCTCCCG-TTGATCAGCCA-GAAG 147 |||| | | | ||| |||||||||||||||||||||| ||| | |||||| || |||| Sbjct 108 AATCAC-TAT-CGGAGCAATGACTATGATGACTCCGCC-GCCGCTAGATCAG-CAGGAAG 163 Query 148 ATGAGGAGATGCTTGTGCCGAATTCAGATTTGGTCGACGGTCCTGCTCAGCCCATGGAAG 207 | |||||||||||||| |||||| | ||||||||||| || | ||||||| ||||||| Sbjct 164 ACGAGGAGATGCTTGTTCCGAATCCGGATTTGGTCGA-GGGAC--CTCAGCCTATGGAAG 220 Query 208 TTACCCAACCCGAGACTGCTGCGAGTACTGTGGAGAA-CCAGCCAGCTGAGGATCCTCCT 266 || ||||| | || ||||||| | |||||||||| ||| ||| | ||||||||||| Sbjct 221 TTGCCCAAACTGATCCTGCTGCTACCGCTGTGGAGAATCCA-CCACCCGAGGATCCTCCA 279 Query 267 ACTCTGAAATTCACGTGGACTATCCCTAAT-TTCTCTAGGCAAAACACCAGGAAGCATTA 325 | |||||||||||||||||| ||||| ||| ||| |||||| || |||||||||||||| Sbjct 280 AGTCTGAAATTCACGTGGACCATCCC-AATGTTCACTAGGCTCAATACCAGGAAGCATTA 338 Query 326 CTCCGATGTATTTGTCGTTGGAGGTTACAAATGGCGCATATT-AATTTTCCCGAAAGGGA 384 ||| || |||||||| || || ||||| || ||||| ||||| | ||||||| ||||| | Sbjct 339 CTCTGACGTATTTGTTGTAGGCGGTTATAAGTGGCGTATATTGATTTTTCCC-AAAGGAA 397 Query 385 ACAATGTTGATCATTTGTCCATGTACTTGGATGTTTCTGATGCTGCGAGTTTGCCGTACG 444 ||||||| || |||||||| ||||||||||||||| |||||||||||| ||||||||||| Sbjct 398 ACAATGTCGACCATTTGTCAATGTACTTGGATGTTGCTGATGCTGCGAATTTGCCGTACG 457 Query 445 GATGGAGCAGATATGCTCAGTTCAGTCTGGCTGTAGTCAATCAAATCCAC-TCCAGATAT 503 | |||||||||||| | |||||||||||||||||||| |||||| || || || ||||| Sbjct 458 GGTGGAGCAGATATTCACAGTTCAGTCTGGCTGTAGTGAATCAAGTCAACAACC-GATAT 516 Query 504 ACCATTAGAAAGGAGACGCAACATCAATTCAATGCTAGAGAAAGCGATTGGGGATTTACA 563 |||| ||||||||||||||||||||||||||||| ||||||||||| ||||| |||||| Sbjct 517 TCCATCAGAAAGGAGACGCAACATCAATTCAATGCAAGAGAAAGCGACTGGGGGTTTACA 576 Query 564 TCATTCATGCCTCTAAGTGAACTTTATGATCCTAGTAGAGGATATTTAGCGAATGATACT 623 |||||||||||||| || || || ||||| || | | |||||||||||| |||||| ||| Sbjct 577 TCATTCATGCCTCTCAGCGAGCTCTATGAACCCACTCGAGGATATTTAGTGAATGACACT 636 Query 624 GTTTTGGTTGAAGCTGAAGTCGCTGTACGTAAGGTTCTTGATTACTGGTCATATGACTCT 683 ||| || ||||||||||||| ||||| ||||| ||||||||||| |||||||||||||| Sbjct 637 GTTCTGATTGAAGCTGAAGTTGCTGTGCGTAAAGTTCTTGATTATTGGTCATATGACTCA 696 Query 684 AAAAAAGAGACTGGTTTTGTTGGACTCAAGAACCAAGGTGCAACTTGTTACATGAATTCT 743 ||||||||||| |||||||||||||| || ||||||||||| || ||||||||||||||| Sbjct 697 AAAAAAGAGACAGGTTTTGTTGGACTAAAAAACCAAGGTGCTACCTGTTACATGAATTCT 756 Query 744 CTCCTACAGACACTATACCACATACCTTACTTCAGAAAGGCTGTATACCACATGCCGACA 803 ||||| ||||| ||||||||||||||||||| ||||||||||| ||||||||||| || Sbjct 757 CTCCTGCAGACTTTATACCACATACCTTACTTTAGAAAGGCTGTTTACCACATGCCAACG 816 Query 804 ACTGAGAACGATTTACCCACAGCAAGTATACCTTTGGCTCTCCAAAGTTTGTTTTACAAG 863 ||||| || ||| ||| || || ||||| || ||||| ||||| ||||| ||||||||| Sbjct 817 ACTGAAAATGATGCACCTACCGCTAGTATCCCATTGGCGCTCCAGAGTTTATTTTACAAG 876 Query 864 CTCCAATATAATGACACTAGTGTTGCAACAAAGGAGCTGACAAAGTCTTTTGGTTGGGAT 923 || || |||||||| || ||||| || |||||||||||||||||||| |||||||||||| Sbjct 877 CTTCAGTATAATGATACCAGTGTAGCGACAAAGGAGCTGACAAAGTCGTTTGGTTGGGAT 936 Query 924 ACATATGATTCCTTTATGCAACATGATGTGCAAGAACTCAATC-GGGTTCTCTGCGAAAA 982 ||||||||||| ||||||||||||||||| ||||||||||| | | |||||||| ||||| Sbjct 937 ACATATGATTCTTTTATGCAACATGATGTACAAGAACTCAA-CAGAGTTCTCTGTGAAAA 995 Query 983 GCTTGAGGACAAAATGAAGGGAACTGTTGTGGAGGGAACAATACAACAA-CTATTTGAGG 1041 |||||||||||| ||||||||||||||||||||||||||||||||| || |||||||| | Sbjct 996 GCTTGAGGACAAGATGAAGGGAACTGTTGTGGAGGGAACAATACAA-AAGCTATTTGAAG 1054 Query 1042 GCCACCATATGAATTATATTGAGTGCATAAATGTAGATTTCAAATCGACACGGAAAGAAT 1101 | ||||| |||||||| ||||||||||| |||||||||| |||||| ||||||||||| | Sbjct 1055 GTCACCACATGAATTACATTGAGTGCATTAATGTAGATTACAAATCTACACGGAAAGAGT 1114 Query 1102 CATTTTACGACCTTCAGCTGGATGTGAAAGGCTGCAAGGATGTTTATGCTTCTTTTGACA 1161 ||||||| ||||| ||||| ||||| ||||||||||| ||||| |||||||||||||||| Sbjct 1115 CATTTTATGACCTCCAGCTTGATGTTAAAGGCTGCAAAGATGTATATGCTTCTTTTGACA 1174 Query 1162 AGTATGTTGAAGTTGAACGTCTTGAAGGAGATAACAAATATCATGCAGAAGGACATGGTT 1221 ||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||| || Sbjct 1175 AGTATGTTGAAGTTGAACGCCTTGAAGGAGACAACAAATACCATGCAGAAGGACATGATT 1234 Query 1222 TACAGGATGCaaaaaaaGGTGTTCTTTTCATTGACTTTCCACCGGTTCTTCAACTCCAGC 1281 | ||||||||||||||||||||||| ||||| ||||||||||| ||||||||||| |||| Sbjct 1235 TGCAGGATGCAAAAAAAGGTGTTCTATTCATAGACTTTCCACCAGTTCTTCAACTTCAGC 1294 Query 1282 TCAAGAGGTTTGAATATGACTTTATGAGGGACACCATGGTAAAGATAAACGATCGGTATG 1341 |||||||||||||||| || |||||||||||||| ||||| ||||| || |||||||||| Sbjct 1295 TCAAGAGGTTTGAATACGATTTTATGAGGGACACAATGGTGAAGATTAATGATCGGTATG 1354 Query 1342 AGTTTCCTCTTGAACTGGATCTTGATAGAGAAAATGGAAAG-TATCTGTCTCCTGATGCT 1400 |||||||||| |||||||||| || |||||| |||| ||| ||| | || |||||||| Sbjct 1355 AGTTTCCTCTCCAACTGGATCTCGACAGAGAAGATGG-AAGATATTTATCCCCTGATGCA 1413 Query 1401 GACAGGAGTGTCCGCAACCTTTATACTCTTCACAGTGTCTTAGTTCATAGTGGAGGAGTA 1460 |||| |||||||||||| || || || || ||||||||||| ||||| ||||||||||| Sbjct 1414 GACAAGAGTGTCCGCAATCTCTACACCCTCCACAGTGTCTTGGTTCACAGTGGAGGAGTG 1473 Query 1461 CATGGTGGGCACTATTACGCTTTTATAAGACCTACGCTCTCAGATCAGTGGTATAAATTT 1520 ||||| ||||| ||||| |||||||| || || || || ||||||||||||||||||||| Sbjct 1474 CATGGAGGGCATTATTATGCTTTTATTAGGCCAACACTTTCAGATCAGTGGTATAAATTT 1533 Query 1521 GATGATGAACGCGTAAC-AAAGGAAGATTTGAAAAGGGCATTGGAGGAGCAATATGGTGG 1579 || |||||||| || || ||| |||||| | ||||| ||| |||| |||||||||||||| Sbjct 1534 GACGATGAACGGGTCACGAAA-GAAGATGTCAAAAGAGCACTGGAAGAGCAATATGGTGG 1592 Query 1580 TGAAGAAGAGCTACCACAGACTAATCCTGGTTTCAATAACCCTCCTTTCAAATTCACAAA 1639 |||||||||| |||| |||| |||||||||||||||||| || ||||||||||||||||| Sbjct 1593 TGAAGAAGAGTTACCGCAGAATAATCCTGGTTTCAATAATCCACCTTTCAAATTCACAAA 1652 Query 1640 GTACTCGAATGCTTACATGCTTGTTTATATCCGGGAAAGTGACAAGGATAAAATAATCTG 1699 ||||||||||| ||||||||||||||||| |||||||||||||||||||| |||||||| Sbjct 1653 ATACTCGAATGCATACATGCTTGTTTATATTCGGGAAAGTGACAAGGATAAGATAATCTG 1712 Query 1700 CAACGTTGATGAGAAAGACATAGCAGAACATTTAAGGGTGAGGCT-aaagaaagagcaag 1758 ||||||||||||||||||||| || |||||||| |||||||||| ||| ||||| |||| Sbjct 1713 CAACGTTGATGAGAAAGACATTGCGGAACATTTGCGGGTGAGGCTGAAA-AAAGAACAAG 1771 Query 1759 aagaaaaggaagataaaagaagaTACAAGGCACAAGCTCACCTATAT-ACAATAATTAAG 1817 ||||||||||||||||||||| ||||||||| ||||||||||| | | || | ||| ||| Sbjct 1772 AAGAAAAGGAAGATAAAAGAAAATACAAGGCTCAAGCTCACCT-TTTCACGACAATCAAG 1830 Query 1818 GTTGCAAGAGATGAAGATC-TTAAGGAACAAATCGGGAAGGATATATATTTTGATCTTGT 1876 || ||||||||||| || | | | || ||||| || ||| ||||||||||||||||||| Sbjct 1831 GTCGCAAGAGATGATGA-CATCACTGAGCAAATTGGAAAGAATATATATTTTGATCTTGT 1889 Query 1877 GGACCATGACAAAGTTCGCAGTTTCCGTATCCAGAAACAGACACCATTTCAACAGTTTAA 1936 || ||||| ||||| | ||||| || |||||||||||||| || |||||||| ||||| Sbjct 1890 TGATCATGAAAAAGTGAGGAGTTTTCGAATCCAGAAACAGACCCCCTTTCAACAATTTAA 1949 Query 1937 GGAGGAGGTAGCCAAAGAATTTGGTGTACCTGTTCAGTTACAGAGGTTCTGGATTTGGGC 1996 ||| |||||||||||||| |||||||| || ||||| ||||| |||||||||| ||||| Sbjct 1950 GGAAGAGGTAGCCAAAGAGTTTGGTGTCCCGGTTCAACTACAGCGGTTCTGGATCTGGGC 2009 Query 1997 TAAGCGACAAAACCATACCTATCGTCCCAATCGCCCCCTTA-CGCCTCAA-GAGGAATTA 2054 ||||| ||||||||||| || || |||||||| |||| || | ||| || || |||||| Sbjct 2010 AAAGCGTCAAAACCATACTTACCGCCCCAATCGTCCCC-TATCACCT-AATGAAGAATTA 2067 Query 2055 CA-ACAGGTTGGACAAATAAGAGAAGCATCTAACAAGGCAAACACTGCAGAACTAAAGCT 2113 || || ||||||||||||| |||| ||||||||||||||||||| ||| || |||||||| Sbjct 2068 CAGAC-GGTTGGACAAATACGAGAGGCATCTAACAAGGCAAACAATGCTGAGCTAAAGCT 2126 Query 2114 -TTTCCTGGAAGTAGAGC----ACCTGGATTTA-CGTCCTATTCCTCCTCCTGAAAAATC 2167 ||| ||||| |||||| ||| ||| | | | |||||||||||| || |||||| | Sbjct 2127 GTTT-TTGGAAATAGAGCGTGGACC-GGA-TGACCTTCCTATTCCTCCCCCAGAAAAAAC 2183 Query 2168 AAAAGAAGATATTCTGCTTTTCTTTAAGCTTTATGACCCCGAGAAGGCAGTATTAAGCTA 2227 || ||||| || ||||||||||| || |||||||| ||||| |||||| |||| || Sbjct 2184 TTCTGAGGATATCCTTCTTTTCTTTAAACTCTATGACCCTGAGAACGCAGTACTAAGATA 2243 Query 2228 TGCAGGCAGGCTGATGGTGAAAAGTTCCAGTAAGCCTATGGATATAACT-GGAAAACTT- 2285 || |||||||| ||||||||||||||||||||||| |||||||| | | || || || Sbjct 2244 TGTTGGCAGGCTAATGGTGAAAAGTTCCAGTAAGCCCATGGATAT-AGTAGGGCAA-TTG 2301 Query 2286 AATGAAATGGTTGGCTTTGCTCCTGATGAAGAAATAGAACTTTTTGAGGAAATCAAGTTT 2345 ||| |||||| ||| |||||||||||||| ||||||||||||||||||||||| |||||| Sbjct 2302 AATAAAATGGCTGGTTTTGCTCCTGATGAGGAAATAGAACTTTTTGAGGAAATAAAGTTT 2361 Query 2346 GAACCTTGTGTTATGTGCGAACA-CTTGGATAAGAAAACTTCATTCAGATTGTGTCAAAT 2404 |||||||| || ||||| ||||| || |||||||| ||||| ||||| |||||||||| Sbjct 2362 GAACCTTGCGTAATGTGTGAACAGATT-GATAAGAAGACTTCTTTCAGGCTGTGTCAAAT 2420 Query 2405 TGAAGATGGAGACATCATTTGCTT-TCAGAAACCTCTAGT-TAACAAGGAGATTGAGTGC 2462 |||||||||||| |||||||| || |||||||||||| | || | |||||| ||| | Sbjct 2421 TGAAGATGGAGATATCATTTG-TTATCAGAAACCTCT-TTCTATCGAGGAGAGTGAATTT 2478 Query 2463 CGCTACCCAGCTGTGCCTTCGTTTCTT-GAATATGTCCAGAA-CAGACAGCTGGTCCGGT 2520 || ||||||| |||||| || ||| || || ||||| ||||| | || ||||||| || | Sbjct 2479 CGATACCCAGATGTGCCATCATTT-TTGGAGTATGTACAGAATC-GAGAGCTGGTGCGTT 2536 Query 2521 TTCGTGCTCTGGAAAAACCTAAAGAAGATGAGTTTGTTCTGGAGTTGTCGAAGCTGCACA 2580 |||| | ||||||||||| ||||| ||||||||| | ||||| |||| |||||||||| Sbjct 2537 TTCGCACACTGGAAAAACCAAAAGAGGATGAGTTTACTATGGAGCTGTCAAAGCTGCACA 2596 Query 2581 CTTATGACGATGTTGTGGAAAAAGTGGCTGAGAAGCTTGGTCTTGACGATCCATCCAAAC 2640 ||||||| ||||| ||||||| ||||||||||||||||| |||||||||||||| |||| Sbjct 2597 CTTATGATGATGTAGTGGAAAGGGTGGCTGAGAAGCTTGGCCTTGACGATCCATCAAAAC 2656 Query 2641 TTAGGCTTACATCTCACAATTGCTATTCCCAGCAACCTAAGCCTCAGCCTATCAAATACC 2700 ||||||||||||||||||||||||| || |||||||| ||||||||||| |||||||||| Sbjct 2657 TTAGGCTTACATCTCACAATTGCTACTCTCAGCAACCCAAGCCTCAGCCAATCAAATACC 2716 Query 2701 GTGGAGTAGACCAT-TTGTCAGATATGTTAGTTCACTACAATCAGACGTCTGACATTTTG 2759 |||||||||| ||| || |||||||||||||||||||| ||||||||||||||||| ||| Sbjct 2717 GTGGAGTAGATCATCTT-TCAGATATGTTAGTTCACTATAATCAGACGTCTGACATATTG 2775 Query 2760 TATTATGAAGTTCTGGACATTCCTCTTCCAGAATTGCAAGGTCTTAAAACCT-TAAAAGT 2818 |||||||||||| |||| ||||||||||||||||||||||||||||| | || ||||||| Sbjct 2776 TATTATGAAGTTTTGGATATTCCTCTTCCAGAATTGCAAGGTCTTAAGA-CTCTAAAAGT 2834 Query 2819 TGCTTTCCATCA-TGCCACGAAGGAAGAAGTGGTAATCCACAATATCAGACTACCTAAAC 2877 ||||||||| | |||||| ||||| |||||| ||||||||||||||||||||||||| | Sbjct 2835 AGCTTTCCAT-AGTGCCACAAAGGATGAAGTGATAATCCACAATATCAGACTACCTAAGC 2893 Query 2878 AAAGCACGGTCGGAGATGTTATTAATGAACTTAAAACAAAGGTGGAGCTTTCGCATCCAG 2937 | || || || |||||||||||||| ||||| ||||||||||||||||||||||||| || Sbjct 2894 AGAGTACTGTTGGAGATGTTATTAACGAACTGAAAACAAAGGTGGAGCTTTCGCATCAAG 2953 Query 2938 ATGCAGAACTGAGATTGCTCGAGGTGTTTTACCACAAGATCTACAAGAT-TTTCCCATCA 2996 ||||||||||||| || || ||||| |||| |||||||||||||||||| ||| ||||| Sbjct 2954 ATGCAGAACTGAGGTTACTTGAGGTCTTTTTCCACAAGATCTACAAGATCTTT-CCATCT 3012 Query 2997 ACTGAAAGAATTGAGAATATAAATGACCAGTACTGGACTTTACGAGCTGAGGAGATTCCG 3056 |||||| ||||||| || || |||||||||||||||||||||||||| |||||||| || Sbjct 3013 ACTGAACGAATTGAAAACATCAATGACCAGTACTGGACTTTACGAGCAGAGGAGATACCT 3072 Query 3057 GAAGAAGAGAAGAATATCGGTCCAAATGATCGCTTAATTCTTGTGTACCATTTTGCTAAG 3116 ||||||||||||||||| ||||| |||||| | ||||||| || || |||||| |||| Sbjct 3073 GAAGAAGAGAAGAATATTGGTCCCAATGATAGGTTAATTCACGTATATCATTTTACTAAA 3132 Query 3117 GAGACTGGACAAAATCAGCAAGTGCAAAACTTTGGCGAGCCCTTCTTCTTGGTAATCCAT 3176 ||| | ||||||||||||||||| ||||| ||||| || |||||||| ||||||||||| Sbjct 3133 GAGGCCGGACAAAATCAGCAAGTTCAAAATTTTGGGGAACCCTTCTTTTTGGTAATCCAC 3192 Query 3177 GAAGGTGAAACTCTT-GAAGAAATAAAGAACCGTATCCAAAAGAAGCTTCATGTATCC-G 3234 |||||||||||| || |||||||| |||| ||||||||||||||| || ||||| || | Sbjct 3193 GAAGGTGAAACT-TTAGAAGAAATCAAGACCCGTATCCAAAAGAAACTCCATGT-CCCTG 3250 Query 3235 ATGAGGACTTTGCCAAGTGGAAGTTTGCGT--TTATGTCAATGGGGCGTCCAGAGTACTT 3292 |||||||||||||||||||||||||||| | || | |||||||| ||||| || ||||| Sbjct 3251 ATGAGGACTTTGCCAAGTGGAAGTTTGCATCGTT-T-TCAATGGGACGTCCTGATTACTT 3308 Query 3293 ACAGGACACAGATGTTGTTTATAATCGCTTTCAGAGAAGAGATGTCTATGGTGCTTTTGA 3352 | |||||||||||||||||||||||||||||||||||||||||| || ||||| | || Sbjct 3309 GCTGGACACAGATGTTGTTTATAATCGCTTTCAGAGAAGAGATGTATACGGTGCGTGGGA 3368 Query 3353 GCAGTACCTCGGGTTGGAGCATGCTGACACTACTCCTAAGAGGGCTTATGCTGCAAACCA 3412 |||||| || ||||||||||| ||| | | ||||||| ||||||||||||||||| || Sbjct 3369 GCAGTATCTTGGGTTGGAGCACATTGATAATGCTCCTAAAAGGGCTTATGCTGCAAATCA 3428 Query 3413 GAACCGCCACGCTTACGAGAAGCCGGTGAAAATATACAATTAG 3455 |||||| ||||| |||||||||||||||||||||||||||||| Sbjct 3429 GAACCGACACGCATACGAGAAGCCGGTGAAAATATACAATTAG 3471 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 191386887545 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5