BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg487672 Length=1482 Score E Sequences producing significant alignments: (Bits) Value AT5G08380.1 | Symbols: AtAGAL1, AGAL1 | alpha-galactosidase 1 |... 2034 0.0 > AT5G08380.1 | Symbols: AtAGAL1, AGAL1 | alpha-galactosidase 1 | chr5:2694677-2697724 REVERSE LENGTH=1515 Length=1515 Score = 2034 bits (1101), Expect = 0.0 Identities = 1367/1487 (92%), Gaps = 51/1487 (3%) Strand=Plus/Plus Query 1 TTCTTCTACTACAAAGTACAAAGCCAGTGTTCGTCAAC-AGTCTTCTTCTCACTCTGTGA 59 ||||||||||||||||||||||| |||||||||||||| | ||||||||||||||||| Sbjct 28 TTCTTCTACTACAAAGTACAAAG-CAGTGTTCGTCAACTA-TCTTCTTCTCACTCTGT-- 83 Query 60 TTAAGCTTGTTTAGAGAGGTTTTGCAGAGATGGCGAGAACTAGAGCAATGGTGATAAAGA 119 || | |||||||||| ||||||||||||| |||| || |||||||||||||||||| Sbjct 84 TT----TCGTTTAGAGAGATTTTGCAGAGATGTCGAG-AC--GAGCAATGGTGATAAAGA 136 Query 120 TGTCAACACTTATGATACTGATTTCATTAATGGTGATGAATATGGTCGAGTCTTCGAGAT 179 || ||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||| Sbjct 137 TGCCAATACTTATGATACTGATTTCATCAATGGTGATGACGATGGTCGAGTCTTCGAGAT 196 Query 180 CAGTTAACAAGGTTAATAATGGTGACGATTCTGAGATCTTACGAAGACTCTTGCTCACTA 239 ||||| || |||| | |||||||||||||||||||||||||| ||||||||||| Sbjct 197 CAGTT---AA---TAATGGTCATGACGATTCTGAGATCTTACGAAGACACTTGCTCACTA 250 Query 240 ATGGCCTCGGCGTCACTCCTCCCATGGGGTGGAATAGCTGGAACCATTTCAGCTGCAACA 299 |||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 251 ATGGCCTCGGAGTCACTCCTCCCATGGGGTGGAATAGCTGGAACCATTTTAGCTGCAACA 310 Query 300 TAGATGAGAAAATGATCAAAGAAACTGCTGATGCTTTGGTTACTACTGGCCTCTCTAAGC 359 ||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 311 TAGATGAAAAAATGATCAAAGAAACTGCTGATGCTTTGGTTACCACTGGCCTCTCTAAGC 370 Query 360 TTGGTTACAAATACGTTAACATCGATGATTGTTGGGCTGAAATTTCTCGTGACAGCAAGG 419 |||| ||||| || ||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 371 TTGGCTACAACTATGTTAACATCGATGATTGCTGGGCTGAAATTTCTCGTGACAGCAAGG 430 Query 420 GAAGTCTGGTGCCAAAGAAGTCAACTTTCCCTTCTGGTATTAAAGCGCTTGCTGATTATG 479 ||||||||||||||||||||||||||||||||||||| ||||||||| |||| ||||||| Sbjct 431 GAAGTCTGGTGCCAAAGAAGTCAACTTTCCCTTCTGGAATTAAAGCGGTTGCGGATTATG 490 Query 480 TTCATAGCAAGGGCCTTAAGCTCGGGATTTACTCAGATGCCGGGTATTTTACCTGCAGCA 539 |||| || || ||||||||||| |||||||||||||||||||||||||| || ||||| | Sbjct 491 TTCACAGTAAAGGCCTTAAGCTTGGGATTTACTCAGATGCCGGGTATTTCACTTGCAGTA 550 Query 540 AAACCATGCCAGGTTCTTTAGGCTATGAGGAGCATGATGCCAAGACATTTGCAGAATGGG 599 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 551 AAACCATGCCAGGTTCTTTAGGCTACGAGGAGCATGATGCCAAGACATTTGCAGAATGGG 610 Query 600 GAATTGATTACTTGAAGTATGACAACTGCAACAACGATGGCTCTAAACCGACTGTCAGGT 659 ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct 611 GAATTGATTACTTGAAGTATGACAACTGCAACAGCGATGGCTCTAAACCTACTGTCAGGT 670 Query 660 ATCCGGTGATGACCCGAGCTCTGATGAAATCTGGCCGCCCCATCTTTCACTCACTGTGTG 719 |||| |||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 671 ATCCAGTGATGACTCGAGCTCTGATGAAATCTGGCCGCCCCATCTTTCACTCATTGTGTG 730 Query 720 AATGGGGAGATATGCATCCAGCTCTATGGGGATCTCCAGTAGGCAACAGTTGGAGAACCA 779 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 731 AATGGGGAGATATGCATCCAGCTCTATGGGGATCTCCAGTAGGCAACAGTTGGAGAACCA 790 Query 780 CTAGTGACATCAAAGATACTTGGCTTAGTATGATCTCAATAGCAGACATGAATGAAGTCT 839 ||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 791 CTAATGACATTAAAGATACTTGGCTTAGTATGATCTCAATAGCAGACATGAATGAAGTCT 850 Query 840 ACGCTGAGCATGCAAGACCTGGTGGCTGGAACGACCCGGATATGCTTGAAGTGGGAAATG 899 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 851 ACGCTGAGCATGCAAGACCTGGTGGCTGGAACGACCCGGATATGCTTGAAGTGGGAAATG 910 Query 900 GAGGAATGACGAAAGACGAGTACATAGTCCATTTCAGCATATGGGCAATCTCAAAGGCTC 959 |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 911 GAGGGATGACAAAAGACGAGTACATAGTCCATTTCAGCATATGGGCAATCTCAAAGGCTC 970 Query 960 CTCTTCTACTTGGCTGTGACATAAGAAACATGACCAAGGAAACAGTGGAGATTGTCGCAA 1019 ||||||||||||| ||||||||||||||||||||||| |||||| ||||||||||||| | Sbjct 971 CTCTTCTACTTGGTTGTGACATAAGAAACATGACCAAAGAAACAATGGAGATTGTCGCCA 1030 Query 1020 ACAAGGAAGTCATAGCTATTAATCAAGAAAAGGAAAGTTCTTGTAGATCCACACGGTGT- 1078 ||||||||||||| |||||||||||||| | | | ||| ||||| Sbjct 1031 ACAAGGAAGTCATTGCTATTAATCAAGA---------T-C--------C-ACATGGTGTT 1071 Query 1079 CAGGCCAAGAAAGTTAGAATGGAAGGCGATCTCGAGGTTTGGGCAGGACCATTGTCAGGT 1138 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1072 CAGGCCAAGAAAGTTAGAATGGAAGGCGATCTCGAGGTTTGGGCAGGACCATTGTCAGGT 1131 Query 1139 TACAGAGTAGCTTTGCTTCTGCTGAACCGTGGACCATCACGAACTTCGATTACTGCTCTC 1198 |||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| Sbjct 1132 TACAGAGTAGCTTTGCTTCTATTGAACCGTGGACCATCGCGAACTTCGATTACTGCTCTT 1191 Query 1199 TGGGATGATATTGAGATCCCTGCAAATAGCATTGTTGAAGCCAGAGATCTATGGCAGCAC 1258 ||||| |||||||||||||||||||||||||| ||||||||||||||||||||| ||||| Sbjct 1192 TGGGAGGATATTGAGATCCCTGCAAATAGCATCGTTGAAGCCAGAGATCTATGGGAGCAC 1251 Query 1259 AAGACATTGAAGCAAAAGTTTGTAGGGAACTTGACAGCAACAGTGGATTCTCATGCGTGT 1318 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 1252 CAGACATTGAAGCAAAAGTTTGTGGGGAACTTGACAGCAACAGTGGATTCTCATGCGTGT 1311 Query 1319 AAGTTGTATATTCTCAAACAGTCAAACCTGTTGCCT-AAAATACATAA--AGAGAGAGTT 1375 ||||||||| ||||||||| | |||||||| ||||||||| | |||||| Sbjct 1312 AAGTTGTATGTTCTCAAAC---C-----TGTTGCCTGAAAATACATGTGTATAGAGAG-- 1361 Query 1376 AATTAGTGTGGCTACGTTACGTTGTAATCTCCAATAATTCTGTAAAAACAATAAGGGTTC 1435 | ||||||||||||||| |||||||| |||||| | |||||||||||||||||||||||| Sbjct 1362 AGTTAGTGTGGCTACGTCACGTTGTATTCTCCAGTTATTCTGTAAAAACAATAAGGGTTC 1421 Query 1436 GTCTCAAATTGGATCTCCACAGATATTCTCCAATAAATTGTTCTAAA 1482 |||||||||| |||||||||||| |||||||||||||||||| ||| Sbjct 1422 GTCTCAAATTAAATCTCCACAGATGTTCTCCAATAAATTGTTCGAAA 1468 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 73091993520 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5