BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg487757 Length=1134 Score E Sequences producing significant alignments: (Bits) Value AT5G09440.1 | Symbols: EXL4 | EXORDIUM like 4 | chr5:2938347-29... 1576 0.0 AT5G64260.1 | Symbols: EXL2 | EXORDIUM like 2 | chr5:25703929-2... 429 3e-119 > AT5G09440.1 | Symbols: EXL4 | EXORDIUM like 4 | chr5:2938347-2939461 FORWARD LENGTH=1115 Length=1115 Score = 1576 bits (853), Expect = 0.0 Identities = 1051/1141 (92%), Gaps = 36/1141 (3%) Strand=Plus/Plus Query 1 ATATTCGAAAACAGAACAAAACCTCTCTGCTCTATCTCTCTCTATATACTCCCAAAATGG 60 |||||| ||||||||||| || | || |||| |||| ||||||||||||||||||||| Sbjct 1 ATATTCAAAAACAGAACACAA---C-CT-CTCT-TCTCACTCTATATACTCCCAAAATGG 54 Query 61 CCTATAATTACCGTTTTGCCATTCTTCTCGTTCTCCTCTCCGCCACCGTCGGCTTCT-CC 119 | ||||| ||||||||||||||||||||||||||||||||||||||||||||||| | || Sbjct 55 CTTATAACTACCGTTTTGCCATTCTTCTCGTTCTCCTCTCCGCCACCGTCGGCTT-TACC 113 Query 120 TCCGCCGCGTTGGTCCAGAAGAAGCCTCCGGTGCCTACCTTGAAAGGAAACATCACTCTC 179 | |||||| | | |||||||||||| | |||||||| |||||||| ||||| Sbjct 114 GCAGCCGCG-T--T------GAAGCCTCCGGTTCGAACCTTGAACGGAAACATTACTCTT 164 Query 180 AATCTCATTTGGTACGGAAAATTCACCCCAATCCAACGGTCCGTAATCGTCGATTTCATC 239 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 165 AATCTCATTTGGTACGGAAAATTCACCCCAATCCAACGGTCCATAATCGTCGATTTCATC 224 Query 240 CGCTCTATCAGTTCCGTCGCCGCCGCAAAAGGTCCCTCCGTCGCGTCGTGGTGGAAGACT 299 |||||||||||||| ||| ||||||| |||||||| ||||||||||||||||||||||| Sbjct 225 CGCTCTATCAGTTCTGTCACCGCCGCCAAAGGTCCATCCGTCGCGTCGTGGTGGAAGACG 284 Query 300 ACGGAGAAGTAC-AAACAAGGTGTCTCAACTCTTGTCGTCGGTAAACAGCTCCTCCTTGA 358 |||||||||||| |||| || || ||||||||||| ||||||||||||||||||||||| Sbjct 285 ACGGAGAAGTACAAAAC-CGGCGTTTCAACTCTTGTTGTCGGTAAACAGCTCCTCCTTGA 343 Query 359 GAACTACCCTCTCGGAAAATCCCTAAAGAGCCCTTACCTTCGTGCTCTATCAAGCAAACT 418 ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 344 GAATTACCCTCTCGGAAAATCCCTAAAGAGCCCTTACCTTCGTGCTCTGTCAAGCAAACT 403 Query 419 TAACGGC-GGTGGTGCTCGGTCAATAACCGTCGTTTTAACGGCGAAAGACGTCACCGTCG 477 |||| || |||||||||||||||||||||||||| ||||||||||||||||||||||| | Sbjct 404 TAAC-GCTGGTGGTGCTCGGTCAATAACCGTCGTCTTAACGGCGAAAGACGTCACCGTTG 462 Query 478 AGGGACTCTGTATGAACCGGTGCGGGACTCACGGGTCAAAGTCACGTTCCGTTAACAGTG 537 ||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| Sbjct 463 AGGGACTCTGTATGAACCGATGCGGGACTCACGGGTCAAAGTCAAGTTCCGTTAACAGTG 522 Query 538 GAGCTTACGTGTGGGTCGGAAACTCTGAAACGCAGTGTCCTGGTTACTGCGCGTGGCCGT 597 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 523 GAGCTTACGTGTGGGTCGGAAACTCTGAAACGCAGTGTCCTGGTTACTGCGCGTGGCCGT 582 Query 598 TTCATCAGCCTATCTACGGACCTCAGACCCCGCCGTTAGTCGCGCCTAACGGTGACGTCG 657 |||||||||||||||||||||||||| | |||||||||||||| |||||||| ||||||| Sbjct 583 TTCATCAGCCTATCTACGGACCTCAGTCTCCGCCGTTAGTCGCACCTAACGGCGACGTCG 642 Query 658 GAGTCGACGGAATGATTATAAACCTCGCGACTCTTCTTGTTAACACCGTTACGAATCCGT 717 |||| |||||||||||||||||| ||||||||||||||||||||||||| |||||||||| Sbjct 643 GAGTTGACGGAATGATTATAAACATCGCGACTCTTCTTGTTAACACCGTAACGAATCCGT 702 Query 718 CTCAAGAAGCTGTTTCGGCTTGTACCGGGATATTCGGTTCGGGTGCTTACCCAGGTTACG 777 ||| ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 703 CTCCAGAAGCTGTCTCGGCTTGTACCGGGATATTCGGTTCGGGTGCTTACCCGGGTTACG 762 Query 778 CGGGTCGGGTTCTTGTAGACAAGACAAGTGGAGCAAGTTACAACGCTTTGGGTCTCGCCG 837 ||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||| Sbjct 763 CGGGTCGGGTTCTCGTAGACAAGACGAGTGGAGCGAGTTACAACGCTTTGGGTCTCGCCG 822 Query 838 GTAGAAAATATCTTTTGCCGGCGTTGTGGGATCCGCAGACTTCGACGTGTAAGACTTTGG 897 ||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||| ||| Sbjct 823 GTAGAAAATATCTATTGCCGGCGTTGTGGGATCCTCAGACTTCGACGTGTAAAACTATGG 882 Query 898 TTTGATTTTTAGACGGTC-GTGAACGAGACACGTGGCAAGAATGGATGGTGATTGCGAGT 956 ||||| ||||||| |||| |||||||||||||||||| ||||| |||||||||| | Sbjct 883 TTTGAATTTTAGATGGTCTGTGAACGAGACACGTGGCTAGAATTGATGGTGATT---A-- 937 Query 957 TTAAAAGCTTGTTGTAGTCAAAGAAAGTT-GTAGATATATCTATCGCGTCTGGTTCGGGG 1015 ||| ||||||||||||||||||||||| |||||||| |||||||||||||||||| | Sbjct 938 --AAA-GCTTGTTGTAGTCAAAGAAAGTTTGTAGATAT--CTATCGCGTCTGGTTCGGAG 992 Query 1016 TTTGGGGAAAGGGATTGTGTTTGTTTTGTCATTTTGTTATGCCCTGT--AAATTCGATCT 1073 ||||||||||||||| ||||||||||||| ||||||||||||||||| ||||||||||| Sbjct 993 TTTGGGGAAAGGGAT-GTGTTTGTTTTGTTATTTTGTTATGCCCTGTGTAAATTCGATCT 1051 Query 1074 TTGGAAATATGTGAAATATAGATTCATATATCTATTTTAATAAAAACGATTTGTAGTTTC 1133 |||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| Sbjct 1052 TTGGAAATATGTGAAAGATAGATTCATATATCTATTTTAATAATAACGATTTGTAGTTTC 1111 Query 1134 C 1134 | Sbjct 1112 C 1112 > AT5G64260.1 | Symbols: EXL2 | EXORDIUM like 2 | chr5:25703929-25705316 FORWARD LENGTH=1388 Length=1388 Score = 429 bits (232), Expect = 3e-119 Identities = 474/586 (81%), Gaps = 36/586 (6%) Strand=Plus/Plus Query 159 TTGAAAGGAAACATCACTCTCAATCTCATTTGGTACGGAAAATTCACCCCAATCCAACGG 218 |||||||| |||||||| |||||||| | |||||||| |||||||| || ||||||||| Sbjct 172 TTGAAAGGTAACATCACAGTCAATCTCGTATGGTACGGGAAATTCACACCGATCCAACGG 231 Query 219 TCCGTAATCGTCGATTTCATCCGCTC--TA---TC-A--G---TTCCGTCG-CCGCCGCA 266 |||||||||||||||||||||| ||| || || | | || | || |||||||| Sbjct 232 TCCGTAATCGTCGATTTCATCCACTCGCTAAACTCCAAAGACGTTGCATCTTCCGCCGCA 291 Query 267 AAAGGTCCCTCCGTCGCGTCGTGGTGGAAGACTACGGAGAAGTACAAACAAGGTGTCT-C 325 | ||| ||||| || |||||||||||||| |||||||| |||||| || ||| | Sbjct 292 ---GTTCCTTCCGTTGCTTCGTGGTGGAAGACGACGGAGAAATACAAAGGTGGC-TCTTC 347 Query 326 AACTCTTGTCGTCGGTAAACAGCTCCTCCTTGAGAACTACCCTCTCGGAAAATCCCT-AA 384 ||| || |||||||| |||||||| || || |||||||| |||||||||||||| || || Sbjct 348 AACACTCGTCGTCGGGAAACAGCTTCTACTCGAGAACTATCCTCTCGGAAAATCTCTCAA 407 Query 385 AGAGCCCTTACCTTCGTGCTCTATCAAGCAAACTTAACGGCGGTGGTGCTCGGTCAATAA 444 | | || |||||| |||||| |||| | |||||||||||||||| | | || || |||| Sbjct 408 AAATCC-TTACCTCCGTGCTTTATCCACCAAACTTAACGGCGGTC-T-C-CGTTCCATAA 463 Query 445 CCGTCGTTTTAACGGCGAAAGACGTCACCGTCGAGGGACTCTGTATGAACCGGTGCGGGA 504 |||||||| ||||||||||||| || |||||||| || ||||||||| ||||||||||| Sbjct 464 CCGTCGTTCTAACGGCGAAAGATGTTACCGTCGAAAGATTCTGTATGAGCCGGTGCGGGA 523 Query 505 CTCACGGGTCAAA-G-T-C-A--C---GTT-C-C-GTTAACAGTG-GAGCTTACGTGTGG 551 ||||||| || | | | | | || | | | |||| | | | |||||||| ||| Sbjct 524 CTCACGGATCCTCCGGTTCGAATCCCCGTCGCGCAGCTAACGGCGCG-GCTTACGTATGG 582 Query 552 GTCGGAAACTCTGAAACGCAGTGTCCTGGTTACTGCGCGTGGCCGTTTCATCAGCCTATC 611 ||||| ||||| || |||||||| ||||| || ||||||||||||||||| ||||| || Sbjct 583 GTCGGGAACTCCGAGACGCAGTGCCCTGGATATTGCGCGTGGCCGTTTCACCAGCCGATT 642 Query 612 TACGGACCTCAGACCCCGCCGTTAGTCGCGCCTAACGGTGACGTCGGAGTCGACGGAATG 671 |||||||| || || ||||||||||| ||||||||||||||||| ||||| ||||||||| Sbjct 643 TACGGACCACAAACGCCGCCGTTAGTAGCGCCTAACGGTGACGTTGGAGTTGACGGAATG 702 Query 672 ATTATAAACCTCGCGACTCTTCTTGTTAACACCGTTACGAATCCGT 717 ||||||||||| || || ||||| | ||||||||| |||||||||| Sbjct 703 ATTATAAACCTTGCCACACTTCTAGCTAACACCGTGACGAATCCGT 748 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 55622203860 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5