BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg487793
Length=1558
Score E
Sequences producing significant alignments: (Bits) Value
AT5G09740.1 | Symbols: HAM2 | histone acetyltransferase of the ... 2436 0.0
AT5G64610.1 | Symbols: HAM1 | histone acetyltransferase of the ... 1282 0.0
> AT5G09740.1 | Symbols: HAM2 | histone acetyltransferase of the
MYST family 2 | chr5:3021952-3024756 REVERSE LENGTH=1572
Length=1572
Score = 2436 bits (1319), Expect = 0.0
Identities = 1491/1573 (95%), Gaps = 16/1573 (1%)
Strand=Plus/Plus
Query 1 TATGAGAAAGAAAGCCCACCCGGGAATCTGCGACCCGACCGAGAAATGGGATCGTCAGCG 60
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1 TATGAGAAAGAAAGCCCACCCGGGAATCTCCGACCCGACCGAGAAATGGGATCGTCAGCG 60
Query 61 AATACAGAAACCAACGGCAACGGAGCGCCACCGTCGTCTAATCAAAAGCCTCCGGCTACA 120
|||||||||||||||||||||| | ||||||||||||| ||||||||||||||||||||
Sbjct 61 AATACAGAAACCAACGGCAACGCACCGCCACCGTCGTCGAATCAAAAGCCTCCGGCTACG 120
Query 121 AACGGCGATGATGCGTCTCATCCTCCTCCTCCTTCTTCAGCTCCTGATCAAGGGATTATA 180
||||||| ||||| ||||||||||||||||||| ||| | |||||||||||| ||||||
Sbjct 121 AACGGCGTTGATGGGTCTCATCCTCCTCCTCCTCCTTTAACTCCTGATCAAGCTATTATA 180
Query 181 GAGTCGGATCCGTCGAAGAAGAGGAAAATGGGGATGCTTTCTCTGGAAGTGGGTACTCGT 240
||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||
Sbjct 181 GAGTCGGATCCGTCGAAGAAGAGGAAAATGGGGATGCTTCCTCTAGAAGTGGGTACTCGT 240
Query 241 GTGATGTGTCGGTGGAGAGACGGAAAACACCATCCGGTCAAAGTAATTGAGCGCCGGAGG 300
||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| ||
Sbjct 241 GTGATGTGTCGGTGGAGAGACGGGAAACACCATCCGGTGAAAGTAATTGAGCGCCGGCGG 300
Query 301 ----AT--------TCATAATGATTACGAGTATTACGTTCATTACACTGAGTTTAATAGG 348
|| ||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 301 ATACATAACGGCGGTCAAAATGATTACGAGTATTACGTTCATTACACTGAGTTTAATAGG 360
Query 349 AGGCTGGATGAATGGACTCAGCTGGACCAACTGGACCTTGATTCAGTAGAGTGCGCTGTT 408
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 361 AGGCTGGATGAATGGACTCAGCTGGACCAACTGGACCTTGATTCAGTAGAGTGCGCTGTA 420
Query 409 GATGAAAAAGTGGAAGACAAGGTAACGAGCCTGAAGATGACACGCCACCAGAAGAGGAAG 468
|||||||||||||||||||||||||| ||| ||||||||||||| |||||||||||||||
Sbjct 421 GATGAAAAAGTGGAAGACAAGGTAACAAGCTTGAAGATGACACGTCACCAGAAGAGGAAG 480
Query 469 ATCGATGAGACACATGTAGAGGGTCATGAAGAGCTGGATGCAGCAAGTTTGCGTGAACAT 528
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 481 ATCGATGAGACACATATAGAGGGTCATGAAGAGCTGGATGCAGCAAGTTTGCGTGAACAT 540
Query 529 GAAGAGTTCACGAAAGTGAAGAACATATCAACAATTGAGCTTGGAAAATATGAGATTGAG 588
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 541 GAAGAGTTCACGAAAGTGAAGAACATATCAACAATTGAGCTTGGAAAATATGAGATTGAG 600
Query 589 ACTTGGTACTTCTCCCCTTTTCCGCCAGAATACAATGAATGTGTGAAGCTCtttttttGT 648
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 601 ACTTGGTACTTCTCCCCTTTTCCGCCAGAATACAATGACTGTGTGAAGCTCTTTTTTTGT 660
Query 649 GAGTTTTGCCTGAACTTCATGAAACGCAAAGAACAGCTTCAAAGGCATATGAGGAAGTGT 708
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 661 GAGTTTTGCCTGAACTTCATGAAACGCAAAGAGCAGCTTCAAAGGCATATGAGGAAGTGT 720
Query 709 GACCTGAAGCACCCCCCTGGTGATGAAATTTATCGAAGTGGTACCTTGTCAATGTTTGAG 768
|||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 721 GACCTGAAGCACCCACCTGGTGATGAAATTTACCGAAGTGGTACCTTGTCAATGTTTGAG 780
Query 769 GTAGATGGCAAAAAGAACAAGGTTTATGCACAGAATCTCTGTTACCTGGCAAAGTTATTT 828
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 781 GTAGATGGCAAAAAGAACAAGGTTTATGCACAGAATCTCTGCTACCTGGCAAAGTTATTT 840
Query 829 CTTGACCACAAAACTCTTTACTACGACGTTGATTTGTTTCTGTTCTACGTTCTTTGCGAA 888
|||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct 841 CTTGACCACAAAACTCTTTACTACGATGTTGATTTGTTTCTATTCTACGTTCTTTGCGAA 900
Query 889 TGTGATGATCGAGGATGCCACATGGTTGGATACTTTTCAAAGGAGAAGCATTCGGAAGAA 948
|||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 901 TGTGATGACCGAGGATGCCACATGGTTGGGTACTTTTCAAAGGAGAAGCATTCGGAAGAA 960
Query 949 GCATACAACTTAGCTTGTATTCTAACCCTGCCTCCATATCAAAGAAAAGGCTATGGAAAA 1008
||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||
Sbjct 961 GCATACAACTTAGCTTGCATTCTAACCCTGCCTTCATATCAAAGAAAAGGCTATGGAAAG 1020
Query 1009 TTCTTAATAGCCTTTTCCTACGAACTGTCAAAGAAAGAAGGAAAAGTTGGGACACCGGAA 1068
|||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||
Sbjct 1021 TTCTTAATAGCCTTTTCCTATGAACTGTCAAAGAAAGAGGGAAAAGTTGGGACACCGGAA 1080
Query 1069 AGACCCTTGTCGGATCTAGGCTTACTAAGCTACAGAGGTTATTGGACTCGTGTTCTATTA 1128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1081 AGACCCTTGTCGGATCTAGGCTTACTAAGCTACAGAGGTTATTGGACTCGTGTTCTATTA 1140
Query 1129 GATATCTTGAAAAAACATAAAGGAAACATATCTATCAAGGAGCTGAGTGACATGACAGCA 1188
|| ||||||||||||||||| |||||||| ||||||||||||||||| ||| ||||||||
Sbjct 1141 GAAATCTTGAAAAAACATAAGGGAAACATTTCTATCAAGGAGCTGAGCGACGTGACAGCA 1200
Query 1189 ATCAAGGCGGAAGATATACTAAGCACACTTCAGAGCCTAGAACTGATACAGTATAGGAAA 1248
||||| |||||||||||| |||||||||||||||||||||||||||||||||| ||||||
Sbjct 1201 ATCAAAGCGGAAGATATATTAAGCACACTTCAGAGCCTAGAACTGATACAGTACAGGAAA 1260
Query 1249 GGACAACACGTGATCTGTGCGGATCCAAAGGTTCTGGACCGACATCTGAAAGCTGCAGGC 1308
||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1261 GGACAGCATGTGATCTGTGCGGATCCAAAGGTTCTGGACCGACATCTGAAAGCTGCAGGC 1320
Query 1309 CGAGGTGGTCTTGATGTAGATGTTAGCAAACTGATTTGGACACCTTACAGGGACCAGAGT 1368
|||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||
Sbjct 1321 CGAGGTGGTCTTGATGTAGATGCTAGCAAACTGATTTGGACACCTTACAAGGACCAGAGT 1380
Query 1369 TGAGAGTAAGGTACACTCTTCTTCTGCCATTGGATTTAATTTGAGTGTGTAAGTAAAACG 1428
| |||||||| ||||||| |||| ||||||||||||| ||||||||||||||||||| ||
Sbjct 1381 TAAGAGTAAG-TACACTCCTCTTGTGCCATTGGATTTGATTTGAGTGTGTAAGTAAAGCG 1439
Query 1429 GGCTTTCTTATTCTCCTAAAATGTTTGTGTAGTTTACTTGTAAATGTTGAA-TCGTACTT 1487
|||| |||||||||||| |||||| ||||| ||||||||||||||||||| ||||||||
Sbjct 1440 GGCTGTCTTATTCTCCTGAAATGTAAGTGTACTTTACTTGTAAATGTTGAAATCGTACTT 1499
Query 1488 GGAATGATGTTTATCAACAACTCTTATAATTAGGA--TTTGAAGCAACTTCATTGGTCCA 1545
|||||| ||||| | |||||||||||||| |||| |||||||||| ||||| ||||||
Sbjct 1500 GGAATGGTGTTTGTTTACAACTCTTATAATGAGGAAATTTGAAGCAATTTCATAGGTCCA 1559
Query 1546 TCTTTCTTTTGCT 1558
|||||||||||||
Sbjct 1560 TCTTTCTTTTGCT 1572
> AT5G64610.1 | Symbols: HAM1 | histone acetyltransferase of the
MYST family 1 | chr5:25828160-25830524 REVERSE LENGTH=1532
Length=1532
Score = 1282 bits (694), Expect = 0.0
Identities = 1046/1215 (86%), Gaps = 28/1215 (2%)
Strand=Plus/Plus
Query 180 AGAGTCGGATCCGTCGAAGAAGAGGAA-AATGGGGATGCTTTCTCTGGAAGTGGGTACTC 238
||| |||||| | |||||||||| ||| ||||||| ||||| | || || || |||||||
Sbjct 156 AGAATCGGATGCTTCGAAGAAGA-GAAGAATGGGGGTGCTTCCGCTCGAGGTTGGTACTC 214
Query 239 GTGTGATGTGTCGGTGGAGAGACGGAAAACACCATCCGGTCAAAGTAATTGAGCGCCG-- 296
| |||||||||| ||||||||||||||| |||||||||| || || || ||||||||
Sbjct 215 GCGTGATGTGTCAATGGAGAGACGGAAAATACCATCCGGTGAAGGTTATCGAGCGCCGAA 274
Query 297 -G-------A-GGAT--TCATAATGATTACGAGTATTACGTTCATTACACTGAGTTTAAT 345
| | || | ||| |||||||||||||| |||||||||||||| |||||||||
Sbjct 275 AGAATTATAATGG-TGGTCACAATGATTACGAGTACTACGTTCATTACACAGAGTTTAAT 333
Query 346 AGGAGGCTGGATGAATGGACTCAGCTGGACCAACTGGACCTTGATTCAGTAGAGTGCGCT 405
|| || |||||||||||| | |||| || || || |||||||||||||||||||| |||
Sbjct 334 AGAAGATTGGATGAATGGATTAAGCTTGAACAGCTTGACCTTGATTCAGTAGAGTGTGCT 393
Query 406 GTT-GATGAAAAAGTGGAAGACAAGGTAACGAGCCTGAAGATGACACGCCACCAGAAGA- 463
|| ||||||||||| ||||||||||| || ||| ||||||||||||| |||||||| |
Sbjct 394 -TTAGATGAAAAAGTTGAAGACAAGGTGACTAGCTTGAAGATGACACGACACCAGAA-AC 451
Query 464 GGAAGATCGATGAGACACATGTAGAGGGTCATGAAGAGCTGGATGCAGCAAGTTTGCGTG 523
||||||| |||||||| ||||||||||||||||||||||||||||| || ||||||||||
Sbjct 452 GGAAGATTGATGAGACTCATGTAGAGGGTCATGAAGAGCTGGATGCTGCCAGTTTGCGTG 511
Query 524 AACATGAAGAGTTCACGAAAGTGAAGAACATATCAACAATTGAGCTTGGAAAATATGAGA 583
|||| || |||||||||||||||||||||||| | || ||||||||||| || |||||||
Sbjct 512 AACACGAGGAGTTCACGAAAGTGAAGAACATAGCTACGATTGAGCTTGGGAAGTATGAGA 571
Query 584 TTGAGACTTGGTACTTCTCCCCTTTTCCGCCAGAATACAATGAATGTGTGAAGCTCtttt 643
||||||| ||||||||||| |||||||| |||||||||||||| || |||||||||||||
Sbjct 572 TTGAGACGTGGTACTTCTCTCCTTTTCCTCCAGAATACAATGACTGCGTGAAGCTCTTTT 631
Query 644 tttGTGAGTTTTGCCTGAACTTCATGAAACGCAAAGAACAGCTTCAAAGGCATATGAGGA 703
| |||||||||||||| | || ||||| |||||||| ||||||||||| ||||||||||
Sbjct 632 TCTGTGAGTTTTGCCTCAGTTTTATGAAGCGCAAAGAGCAGCTTCAAAGACATATGAGGA 691
Query 704 AGTGTGACCTGAAGCACCCCCCTGGTGATGAAATTTATCGAAG-TGGTACCTTGTCAATG 762
| || || |||||||||||||||| |||||||| |||||||| | ||| |||||||||
Sbjct 692 AATGCGATTTGAAGCACCCCCCTGGGGATGAAATCTATCGAAGCT-CTACTTTGTCAATG 750
Query 763 TTTGAGGTAGATGGCAAAAAGAACAAGGTTTATGCACAGAATCTCTGTTACCTGGCAAAG 822
|||||||| |||||||| ||||| ||||| ||||||||||| |||||||| |||||||||
Sbjct 751 TTTGAGGTGGATGGCAAGAAGAATAAGGTCTATGCACAGAACCTCTGTTATCTGGCAAAG 810
Query 823 TTATTTCTTGACCACAAAACTCTTTACTACGACGTTGATTTGTTTCTGTTCTACGTTCTT 882
||||||||||||||||||||||||||||| |||||||||||||| |||||||| ||||
Sbjct 811 TTATTTCTTGACCACAAAACTCTTTACTATGACGTTGATTTGTTCCTGTTCTATATTCTC 870
Query 883 TGCGAATGTGATGATCGAGGATGCCACATGGTTGGATACTTTTCAAAGGAGAAGCATTCG 942
|| |||||||||||||| |||||||||||||||||||||||||||||||| || || ||
Sbjct 871 TGTGAATGTGATGATCGTGGATGCCACATGGTTGGATACTTTTCAAAGGAAAAACACTCA 930
Query 943 GAAGAAGCATACAACTTAGCTTGTATTCTAACCCTGCCTCCATATCAAAGAAAAGGCTAT 1002
|||||||| |||||||| ||||| || || || || |||||||||||||| || ||||||
Sbjct 931 GAAGAAGCTTACAACTTGGCTTGCATCCTTACACTTCCTCCATATCAAAGGAAGGGCTAT 990
Query 1003 GGAAAATTCTTAATAGCCTTTTCCTACGAACTGTCAAAGAAAGAAGGAAAAGTTGGGACA 1062
|| ||||||||||||||||| ||||| ||||| ||||||||||| || ||||| ||||||
Sbjct 991 GGCAAATTCTTAATAGCCTTCTCCTATGAACTCTCAAAGAAAGAGGGCAAAGTCGGGACA 1050
Query 1063 CCGGAAAGACC-CTTGTCGGATCTAGGCTTACTAAGCTACAGAGGTTATTGGACTCGTG- 1120
|||||||| || || || |||||||| ||| | || ||||||||||| |||||||| |
Sbjct 1051 CCGGAAAGGCCGCTC-TCTGATCTAGGGTTAGTGAGTTACAGAGGTTACTGGACTCG-GA 1108
Query 1121 TTCTATTAGATATCTTGAAAAAACATAAAGGAAACATATCTATCAAGGAGCTGAGTGACA 1180
|| ||||||| || |||||||| || || |||||||||||||||||||||||||| ||||
Sbjct 1109 TTTTATTAGACATTTTGAAAAAGCACAAGGGAAACATATCTATCAAGGAGCTGAGCGACA 1168
Query 1181 TGACAGCAATCAAGGCGGAAGATATACTAAGCACACTTCAGAGCCTAGAACTGATACAGT 1240
||||||| || || || ||||||||| ||||||| || |||||| | ||||||||||| |
Sbjct 1169 TGACAGCGATTAAAGCAGAAGATATATTAAGCACCCTGCAGAGCTTGGAACTGATACAAT 1228
Query 1241 ATAGGAAAGGACAACACGTGATCTGTGCGGATCCAAAGGTTCTGGACCGACATCT-GAAA 1299
| ||||||||||||||||| ||||| |||||||| ||||| ||||||||||| || ||||
Sbjct 1229 ACAGGAAAGGACAACACGTAATCTGCGCGGATCCTAAGGTACTGGACCGACA-CTTGAAA 1287
Query 1300 GCTGCAGGCCGAGGTGGTCTTGATGTAGATGTTAGCAAACTGATTTGGACACCTTACAGG 1359
|| ||||||||||||||||||||||| ||||| |||||| |||| ||||| |||||||
Sbjct 1288 GCGGCAGGCCGAGGTGGTCTTGATGTGGATGTGAGCAAAATGATATGGACTCCTTACAAA 1347
Query 1360 GACCAGAGTTGAGAG 1374
|| ||||| | ||||
Sbjct 1348 GAGCAGAGCTAAGAG 1362
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 76907234940
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5