BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg487870 Length=1180 Score E Sequences producing significant alignments: (Bits) Value AT5G10410.1 | Symbols: | ENTH/ANTH/VHS superfamily protein | c... 1179 0.0 > AT5G10410.1 | Symbols: | ENTH/ANTH/VHS superfamily protein | chr5:3271915-3273395 FORWARD LENGTH=1367 Length=1367 Score = 1179 bits (638), Expect = 0.0 Identities = 799/878 (91%), Gaps = 6/878 (1%) Strand=Plus/Plus Query 1 TAGTTCTATCGAGAGAATGTCAGAACTCAAAACTCGCATAATCGGAAAATTCAAAGACAA 60 |||||| ||||||| |||| ||| ||||||||||| |||||||||||||||||||||||| Sbjct 22 TAGTTCCATCGAGATAATGCCAGGACTCAAAACTCACATAATCGGAAAATTCAAAGACAA 81 Query 61 AGCTTCGATAGGCAAAGCAAGGTTGGTTCATAGTTTTAGCTCCACTGCTGTCAAATACAT 120 ||||||||||||||||||||| |||||||||||||| | ||||| || ||||||||||| Sbjct 82 AGCTTCGATAGGCAAAGCAAGATTGGTTCATAGTTTCGGGTCCACCGCCGTCAAATACAT 141 Query 121 TCACTTAGCGCTCTTGAAATCAACAACTCATACTTCTAACAAACCACCAAACAGTGATTA 180 ||||||||| |||||||| |||||||||| |||| |||||||||||||||||||||| || Sbjct 142 TCACTTAGCCCTCTTGAAGTCAACAACTCGTACTCCTAACAAACCACCAAACAGTGACTA 201 Query 181 TGTCTCCGATGTCATCTCTTACTCGAACAGCCGTTACGCTCCGGCAGCTTT-TGCGGCGG 239 |||||||| ||| ||||||||||| |||||||||||||||||||| ||||| | | |||| Sbjct 202 TGTCTCCGCTGTTATCTCTTACTCCAACAGCCGTTACGCTCCGGCGGCTTTCT-CAGCGG 260 Query 240 CTCTGTGGAGATTACGTGTCACGAAAAACGCTATCGTGGCCACCAAATCTCTCATCGTCA 299 |||||||||| |||||||||||||| |||||||| ||||||||||| ||||||||||||| Sbjct 261 CTCTGTGGAGGTTACGTGTCACGAAGAACGCTATTGTGGCCACCAAGTCTCTCATCGTCA 320 Query 300 TCCACAAGCTTATCAAATCATCAAGAGACAAGTTTGAAGGCCTAGATCGTGGTCGAAACA 359 |||||||||||||||||||||||||||||||||||||||| |||| || ||||||||||| Sbjct 321 TCCACAAGCTTATCAAATCATCAAGAGACAAGTTTGAAGGACTAGGTCATGGTCGAAACA 380 Query 360 ATCTAAAGTTGAATGAGTTTTCAGACAAATCTTCTACTCTCGCACTAGAATTGTCTCAAT 419 ||||||||||||| |||||||||||||||||||||| |||| | |||||||||||||| | Sbjct 381 ATCTAAAGTTGAACGAGTTTTCAGACAAATCTTCTAATCTCACGCTAGAATTGTCTCAGT 440 Query 420 GGATTAGATGGTATGGACTATATTTGGATCGTCTCTCATGGGTTCCGAAAGTATTAGGAT 479 |||||||||||||||||| ||| |||||||||||||| ||||||||||| |||||||||| Sbjct 441 GGATTAGATGGTATGGACAATACTTGGATCGTCTCTCGTGGGTTCCGAAGGTATTAGGAT 500 Query 480 CTTTTCCAAATTTATTGGAGAACCCGAAAGAGAAAGTCAAAGAAAAAGATCGTGTTTCGT 539 ||||||||||||| |||| ||| || ||||| ||||| |||| |||||||||||||||| Sbjct 501 CTTTTCCAAATTTGTTGGTGAATCCAAAAGATAAAGTTGAAGAGAAAGATCGTGTTTCGT 560 Query 540 CTTACCAAACCGGGTGTATTATGAGACAAACGGATTTTCTTGTGAGtttttttGAGCATA 599 ||||||||||||||| |||||| ||||||||||||| ||||||||||||||||||||||| Sbjct 561 CTTACCAAACCGGGTATATTATAAGACAAACGGATTCTCTTGTGAGTTTTTTTGAGCATA 620 Query 600 TATGTACCAGACCGGAGATTCCACCTATGTACGAAAACAAGATCGTGGACGAGATTAGAG 659 ||||||||||||| |||||||| ||||||| | ||||||||||||||||||||||||||| Sbjct 621 TATGTACCAGACCTGAGATTCCGCCTATGTTCCAAAACAAGATCGTGGACGAGATTAGAG 680 Query 660 AGCTCGTGATTCAAGACTACTTT-ATGGTTGTGAGATTGGTTATGGTACGGCTTCGAG-T 717 |||| |||||| ||||||| ||| | | ||||||||||||||||||||||||||| || | Sbjct 681 AGCTAGTGATTGAAGACTA-TTTCAAGATTGTGAGATTGGTTATGGTACGGCTTC-AGGT 738 Query 718 GTTGAGTGAAAGATTGATTAAACCGAATGTTAAGCATATTGGTGATCCCGGTTTGAACGA 777 |||| |||| |||||||||||||| |||||| | ||||||||||| |||| ||||||| Sbjct 739 GTTGTTTGAACGATTGATTAAACCGGGTGTTAAACCTATTGGTGATCTCGGTCTGAACGA 798 Query 778 TTTGAGTCTGGTTTTGGTGAGACTTGAAGAATGCAAAGAGAGTTTGAGTGGAtttttttG 837 ||| |||||| ||||||||||||||| ||||||||| ||||| ||||||||||| ||||| Sbjct 799 TTTTAGTCTGCTTTTGGTGAGACTTGTAGAATGCAAGGAGAGCTTGAGTGGATTATTTTG 858 Query 838 GCGTTGCAGACGTCTAGCCGAAGATTTTTGGTGTTTGG 875 |||||||||||||||||| || |||||||||||||||| Sbjct 859 GCGTTGCAGACGTCTAGCGGATGATTTTTGGTGTTTGG 896 Score = 132 bits (71), Expect = 9e-30 Identities = 107/123 (87%), Gaps = 7/123 (6%) Strand=Plus/Plus Query 876 ACAATAAGCAAATGGTTAAATTGGCCGGTTTGGTTCAGACTACGGTTAAAGACGATGAGG 935 |||||||||| ||| || ||||||||||||||||||||||||||||||| |||||||||| Sbjct 930 ACAATAAGCAGATGATTGAATTGGCCGGTTTGGTTCAGACTACGGTTAAGGACGATGAGG 989 Query 936 AGATGGTTGAAATATTGGCCGGTTC-GTCTCCGA-CCGAATGGGTAACATTCGACGACTC 993 ||||| ||| | ||||| ||||| || | | | |||||||||||||||||||||| || Sbjct 990 AGATGATTG--A-ATTGGTTGGTTCGGT-T-CAACCCGAATGGGTAACATTCGACGATTC 1044 Query 994 TGA 996 ||| Sbjct 1045 TGA 1047 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 57931428930 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5