BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg487924 Length=1717 Score E Sequences producing significant alignments: (Bits) Value AT5G10930.1 | Symbols: CIPK5, SnRK3.24 | CBL-interacting protei... 2466 0.0 AT4G30960.1 | Symbols: CIPK6, SIP3, SNRK3.14, ATCIPK6 | SOS3-in... 272 7e-72 > AT5G10930.1 | Symbols: CIPK5, SnRK3.24 | CBL-interacting protein kinase 5 | chr5:3445366-3447114 REVERSE LENGTH=1749 Length=1749 Score = 2466 bits (1335), Expect = 0.0 Identities = 1567/1675 (94%), Gaps = 32/1675 (2%) Strand=Plus/Plus Query 1 ATTTGCACActtcatcttcttc-t--tc---t-tcttcctctcccaaattccatggagtt 53 ||||||||||||| |||||||| | || | ||||||||||||| |||||||||| || Sbjct 1 ATTTGCACACTTCTTCTTCTTCTTCCTCATTTCTCTTCCTCTCCCATATTCCATGGAATT 60 Query 54 tctctacttcttcACCTATGAGAGTAATCTATTCTACTCATGTACTCAAAATACTAACCA 113 ||||||||||||||||||||||||||| || || ||||||||||||||||||||| || Sbjct 61 GCTCTACTTCTTCACCTATGAGAGTAATATA-TC--CTCATGTACTCAAAATACTAATCA 117 Query 114 AACCTCATGGTTCAACACCACcttttcttaatcctccttcttcttcatcatcatcttctt 173 ||| ||||| ||||||||||||||||||||||||| | |||||||||| | ||||||| Sbjct 118 AACTTCATGCTTCAACACCACCTTTTCTTAATCCT-C--CTTCTTCATC-T--TCTTCTT 171 Query 174 ctaatctttcattttccctaagcttcatcGGAGT-AGTATCAAATGGAGGAAGAACGGCG 232 | | | ||||||||||||| || |||| || | ||||||||||||||||||||||| Sbjct 172 CCACTATTTCATTTTCCCT-AG-----TCGGTGTAAATATCAAATGGAGGAAGAACGGCG 225 Query 233 AGTTCTGTTCGGAAAGTACGAGATGGGAAGGTTATTAGGCAAAGGAACCTTCGCGAAAGT 292 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 226 AGTTCTGTTCGGAAAGTACGAGATGGGAAGGTTATTAGGCAAAGGAACCTTCGCCAAAGT 285 Query 293 CTATTACGGCAAAGAGATCATCGGTGGCGAGTGCGTCGCCATCAAAGTCATCAACAAGGA 352 |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| Sbjct 286 CTATTACGGCAAAGAGATCATCGGCGGCGAGTGCGTCGCAATCAAAGTCATCAACAAGGA 345 Query 353 TCAAGTAATGAAGAGACCTGGAATGATGGAACAGATCAAACGCGAGATTTCAATCATGAA 412 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 346 TCAAGTAATGAAGAGACCTGGAATGATGGAACAAATCAAACGCGAGATTTCAATCATGAA 405 Query 413 ACTCGTTCGTCATCCAAACATCGTTGAATTAAAAGAAGTCATGGCTACGAAGACGAAGAT 472 |||||||||||||| ||||| |||||||| ||||||||||||||||||||||| ||||| Sbjct 406 GCTCGTTCGTCATCCCAACATAGTTGAATTGAAAGAAGTCATGGCTACGAAGACCAAGAT 465 Query 473 CTTCTTCGTCATGGAGTTCGTTAAAGGCGGCGAGCTGTTCTGCAAAATCTCTAAAGGTAA 532 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 466 CTTCTTCGTCATGGAGTTCGTTAAAGGCGGCGAGCTTTTCTGCAAAATCTCTAAAGGTAA 525 Query 533 GTTACACGAAGACGCTGCTCGTAGATATTTCCAGCAATTGATCTCAGCCGTTGATTATTG 592 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 526 GTTACACGAAGACGCTGCTCGTAGATATTTCCAGCAATTGATCTCAGCCGTTGATTATTG 585 Query 593 CCATAGCAGAGGCGTTTCTCATCGCGATCTGAAACCTGAGAACCTTCTTTTAGATGAGAA 652 |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 586 CCATAGTAGAGGCGTTTCTCATCGCGATCTGAAACCTGAGAATCTTCTTTTAGATGAGAA 645 Query 653 TGGAGATTTGAAAATCTCCGATTTCGGATTATCTGCGTTACCGGAGCAGATTCTTCAAGA 712 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 646 TGGAGATTTGAAAATCTCCGATTTCGGATTATCTGCGTTACCGGAACAGATTCTTCAAGA 705 Query 713 TGGATTGCTTCATACGCAGTGTGGAACTCCGGCTTACGTTGCGCCGGAGGTTTTACGGAA 772 |||||||||||||||||||||||||||||||| || |||||||||||||| ||| ||| Sbjct 706 CGGATTGCTTCATACGCAGTGTGGAACTCCGGCGTATGTTGCGCCGGAGGTATTAAAGAA 765 Query 773 GAAAGGATACGACGGCGCGAAGGCGGATATCTGGTCATGCGGCGTCGTTTTGTATGTGCT 832 ||||||||||||||||||||| || ||||||||||| |||||||||||||||||||| || Sbjct 766 GAAAGGATACGACGGCGCGAAAGCTGATATCTGGTCGTGCGGCGTCGTTTTGTATGTTCT 825 Query 833 TCTCGCCGGATGTTTGCCGTTTCAAGATGAGAATCTGATGAATATGTATCGGAAGATTTT 892 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 826 TCTCGCCGGATGTTTGCCGTTTCAAGATGAGAATCTGATGAATATGTATCGGAAGATTTT 885 Query 893 CAGAGCGGATTTTGAATTTCCGCCGTGGTTTTCGCCGGAATCGAGGCGGTTGATTTCTAA 952 ||||||||||||||||||||||||||||||||| |||||| ||||| |||||||||| || Sbjct 886 CAGAGCGGATTTTGAATTTCCGCCGTGGTTTTCTCCGGAAGCGAGGAGGTTGATTTCGAA 945 Query 953 ACTCCTCGTCGTAGATCCAGATCGACGGATCTCGATTCCGGCGATTATGAGAACGACTTG 1012 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 946 ACTCCTCGTTGTAGATCCAGATCGACGGATCTCGATTCCGGCGATTATGAGAACGCCTTG 1005 Query 1013 GCTTCGGAAAAACTTCACTCCGCCGTTAGCTTTCAAAATCGACGAACCGATTTGTTCTCA 1072 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1006 GCTCCGGAAAAACTTCACTCCGCCGTTAGCTTTCAAAATCGACGAACCGATTTGTTCTCA 1065 Query 1073 GAGCAACAACAACAACGACGAAGAAGAAGAAGACGGAGATTGGGAAAATCAAACAGAGCC 1132 |||| ||| |||||||| ||||||||||||||||||||||| ||||||||||||||||| Sbjct 1066 AAGCAGCAAAAACAACGAAGAAGAAGAAGAAGACGGAGATTGTGAAAATCAAACAGAGCC 1125 Query 1133 GATTTCGCCGAAGTTCTTCAACGCTTTCGAATTCATCTCCTCGATGTCTTCCGGATTCGA 1192 ||| |||||||| ||||||||||||||||||||||| |||||||||||||||||||| || Sbjct 1126 GATATCGCCGAAATTCTTCAACGCTTTCGAATTCATATCCTCGATGTCTTCCGGATTTGA 1185 Query 1193 TC-TCTCAAGCTTGTTCGAGAGTAAGAGGAAAGTGCAATCGGTGTTCACGTCAAAATCGT 1251 | | || |||||||||||||| ||||||||||||||||||||||| |||||| |||| Sbjct 1186 -CTTATCGAGCTTGTTCGAGAGCAAGAGGAAAGTGCAATCGGTGTTTACGTCACGGTCGT 1244 Query 1252 CGGCGACGGAGCTAATGGAGAAGATCGAAACGGTTACGAAGGAGATGAACATGAAAGTGA 1311 ||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 1245 CGGCGACGGAGGTAATGGAGAAGATAGAAACGGTTACGAAGGAGATGAACATGAAAGTGA 1304 Query 1312 AGAGAACGAAGGATTTTAAAGTGAAGATGGAAGGGAAAACGGAAGGGAGAAAAGGACGGC 1371 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1305 AGAGAACGAAGGATTTTAAAGTGAAGATGGAAGGGAAAACGGAAGGGAGAAAAGGACGGT 1364 Query 1372 TGTCGATGACGGCGGAAGTGTTTGAAGTAGCGCCGGAGATCTCGGTGGTGGAGTTTTGCA 1431 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 1365 TGTCGATGACGGCGGAAGTGTTTGAAGTAGCGCCGGAGATATCGGTGGTGGAGTTTTGCA 1424 Query 1432 AATCGGCGGGAGATACTTTGGAGTACGATAGGTTATACGAAGAAGAAGTCCGGCCGGCGT 1491 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 1425 AATCGGCGGGAGATACTTTGGAGTACGATAGGTTATACGAAGAAGAAGTACGGCCGGCGT 1484 Query 1492 TAAATGACATCGTTTGGTCATGGCACGGTGATAATAATAATAATACTTCTTCCAAGGATT 1551 |||| |||||||| |||||||||||||||||||||||||| | |||||||| |||||| Sbjct 1485 TAAACGACATCGTCTGGTCATGGCACGGTGATAATAATAACA---CTTCTTCCGAGGATT 1541 Query 1552 GTTGAATCAGGAGTGTTTGGTTCTAAGTTAACCGATTTTCGGTTAACGT--TATA--TAA 1607 |||||||||| ||| ||||||||| | ||||||| || ||||||||||| |||| ||| Sbjct 1542 GTTGAATCAGTAGTTTTTGGTTCTGATTTAACCGGTTATCGGTTAACGTAGTATAACTAA 1601 Query 1608 GGACTGTTACATTGAACCTAAATTTTCTTTGGTTTAATAAAATTTTGGTTTTACT 1662 | |||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 1602 GAACTGTTACATTGAACCCAAATTTTCTTTGGTTTAATAAAATTTTGGTTTTACT 1656 > AT4G30960.1 | Symbols: CIPK6, SIP3, SNRK3.14, ATCIPK6 | SOS3-interacting protein 3 | chr4:15067053-15069010 FORWARD LENGTH=1958 Length=1958 Score = 272 bits (147), Expect = 7e-72 Identities = 429/558 (77%), Gaps = 48/558 (9%) Strand=Plus/Plus Query 371 TGGAATGATGGAACAGATCAAACGCGAGATTTCAATCATGA-AACTCGTTCGTCATCCAA 429 ||| ||| | || ||||||||||| ||||| || | |||| | | || ||||||| Sbjct 536 TGGTATGGTTGATCAGATCAAACGAGAGATCTCTGTGATGAGGA-TGGTGAAACATCCAA 594 Query 430 ACATCGTTGA-ATTAAAAGAAGTCATGGCTACG-AAGA-CGAAGATCT-TCTTCGTCATG 485 ||||||| || || | ||||||||||| | | || | | ||||||| | |||| |||| Sbjct 595 ACATCGTCGAGCTT-CACGAAGTCATGGCGA-GTAA-ATCCAAGATCTAT-TTCGCCATG 650 Query 486 GAG-TTCGTTA-AAGGCGGCGAGCTGTTCTGC-AAAATCTCTAAAGGTAAG-TTACACGA 541 ||| || | || |||||| ||| | ||| || || | ||||||| ||| ||| || Sbjct 651 GAGCTT-G-TACGAGGCGGTGAGTTATTC-GCTAAGGTGGCTAAAGG-AAGACTACGTGA 706 Query 542 AGACGCT-GCTCGTAG-ATATTTCCAGCAATTGATCTCAGCCGTTGATTAT-TGCCATAG 598 ||||| | |||||| | ||||||||||||||||||||||||||||||| | || ||||| Sbjct 707 AGACG-TAGCTCGT-GTTTATTTCCAGCAATTGATCTCAGCCGTTGATT-TCTGTCATAG 763 Query 599 CAGAGGCGTTTCTCATCGCGATCTGAAACCTGAGAACCTTCTT-TTAGATGA-GAATGG- 655 | | || |||| ||| || ||||||||||| ||||| || ||| |||||||| ||| || Sbjct 764 CCGTGGTGTTTATCACCGAGATCTGAAACCGGAGAATCT-CTTGTTAGATGAAGAA-GGT 821 Query 656 AGATTTGAAAATCTCCGATTTCGGAT-TATCTGCGTT-ACCGGAGCAGATTCTT-CAAGA 712 | || | || | | ||||| || | | ||||| || || | |||| || ||||| Sbjct 822 A-ATCTCAAGGTGACTGATTTTGG-TCTCTCTGCTTTCACTG-AGCAT-TTGAAACAAGA 877 Query 713 TGGA-TTGCTTCATACGCAGT-GTGGAACTCCGGCTTACGTTGCGCCGGAGGTTTTACGG 770 ||| || |||||||| | | |||||||||||||||| ||||||||||||||| || | Sbjct 878 CGGACTT-CTTCATACA-ACTTGTGGAACTCCGGCTTATGTTGCGCCGGAGGTTATATTG 935 Query 771 AAGAAAGGATACGACGGCGCGAAGGCGGATATCTGGTCATGCGGCGTCGT--TTTGTATG 828 ||||||||||||||||| || ||||||||| | ||||| || || || | ||| | || Sbjct 936 AAGAAAGGATACGACGGAGCTAAGGCGGATCTGTGGTCTTGTGGTGTTATACTTT-T-TG 993 Query 829 TGCTTCTCGCCGGATGTTTGCCGTTTCAAGATGAGAATCT-GATGAATATGTATCGGAAG 887 ||||||| || || | |||||||||||||||||| ||||| | ||||||||||| ||||| Sbjct 994 TGCTTCTTGCTGGTTATTTGCCGTTTCAAGATGATAATCTTG-TGAATATGTATAGGAAG 1052 Query 888 ATTTTCAGAGCG-GATTT 904 |||| ||||| | ||||| Sbjct 1053 ATTTACAGAG-GAGATTT 1069 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 84889121595 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5