BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg487989 Length=1499 Score E Sequences producing significant alignments: (Bits) Value AT5G11520.1 | Symbols: ASP3, YLS4 | aspartate aminotransferase ... 2362 0.0 > AT5G11520.1 | Symbols: ASP3, YLS4 | aspartate aminotransferase 3 | chr5:3685089-3687764 REVERSE LENGTH=1561 Length=1561 Score = 2362 bits (1279), Expect = 0.0 Identities = 1416/1481 (96%), Gaps = 14/1481 (1%) Strand=Plus/Plus Query 1 AAACACAAAAATGAAAACTACTGATTTCTCTTCTTCTTCCTCTTCCGATCGCAGGATCGG 60 ||| |||||||||||||||||| |||||||||| ||||| |||||||||||||||||||| Sbjct 34 AAAAACAAAAATGAAAACTACTCATTTCTCTTCCTCTTCTTCTTCCGATCGCAGGATCGG 93 Query 61 TGCTCTGCTCCGTCATCTCACTGCCGGCTCAGATTCGGATC-ATCTGAGCTC-CGTTTAT 118 |||||||||||||||||||| | |||||||||||||||| | | |||||||| | ||||| Sbjct 94 TGCTCTGCTCCGTCATCTCAATTCCGGCTCAGATTCGGA-CAACCTGAGCTCTC-TTTAT 151 Query 119 GCCTCTCCGACATCGGGAGTCACCGGCGGTTCTGTTTTCGCTCATCTTGTTCAAGCTCCT 178 || |||||||||||||||| |||||| |||||||||||| ||||||||||||||||||| Sbjct 152 GCATCTCCGACATCGGGAGGCACCGGTGGTTCTGTTTTCTCTCATCTTGTTCAAGCTCCA 211 Query 179 GAGGATCCTATTCTTGGGGTGACAGTTGCATATAACAAAGATCCTAGCCCAGTTAAGCTG 238 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 212 GAGGATCCTATTCTTGGGGTGACAGTTGCATACAACAAAGATCCTAGCCCAGTTAAGCTG 271 Query 239 AATTTGGGAGTTGGTGCTTACCGAACTGAGGAGGGAAAACCTTTGGTTCTTAATGTTGTG 298 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 272 AATTTAGGAGTTGGTGCTTACCGAACTGAGGAGGGAAAACCTTTGGTTCTTAATGTTGTG 331 Query 299 AGGAAAGCTGAGCAGCAGCTTATCAATGACAGAACAAGAGTTAAGGAGTATCTTCCCATT 358 ||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| Sbjct 332 AGGAAAGCTGAGCAGCAGCTTATCAATGACAGAACAAGAATCAAGGAGTATCTTCCCATT 391 Query 359 GTTGGATTGGTTGAGTTCAACAAGTTAAGCGCTAAGCTCATATTAGGCGCTGACAGTCCT 418 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 392 GTTGGATTGGTTGAGTTCAACAAGTTAAGCGCTAAGCTCATACTAGGCGCTGACAGTCCT 451 Query 419 GCTATTCGGGAGAATCGGATTACCACCGTGGAGTGTTTGTCTGGTACTGGTTCTCTGAGA 478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 452 GCTATTCGGGAGAATCGGATTACCACCGTGGAGTGTTTGTCTGGTACTGGTTCTCTGAGA 511 Query 479 GTTGGAGGGGAGTTTTTGGCCAAGCATTATCATCAGAAAACAATTTATATTACTCAGCCA 538 |||||||| ||||||||||| || ||||||||||||||||||||||| || ||||||||| Sbjct 512 GTTGGAGGAGAGTTTTTGGCTAAACATTATCATCAGAAAACAATTTACATCACTCAGCCA 571 Query 539 ACATGGGGAAATCATCCAAAGATTTTCACCCTCGCCGGTTTGACAGTGAAAACTTACCGC 598 ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct 572 ACATGGGGAAATCATCCAAAGATTTTCACGCTCGCTGGTTTGACAGTGAAAACTTACCGA 631 Query 599 TACTACGATCCAGCGACGCGTGGGTTGAACTTTCAAGGTTTGTTAGAAGACCTTGGTGCT 658 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 632 TACTACGATCCAGCGACGCGTGGGTTGAACTTTCAAGGTTTATTAGAAGACCTTGGTGCT 691 Query 659 GCCCCAGCTGGTTCTATAGTACTTCTCCATGCCTGTGCCCATAACCCTACTGGTGTTGAT 718 ||| || ||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 692 GCCGCACCTGGTTCTATAGTGCTTCTCCATGCCTGTGCCCATAACCCTACTGGTGTTGAT 751 Query 719 CCAACCATTCAACAATGGGAGCAAATCAGGCAGTTGATGCGATCAAAGGGATTGATGCCC 778 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 752 CCAACCATTCAACAATGGGAGCAAATCAGGAAGTTGATGCGATCAAAGGGATTGATGCCC 811 Query 779 TTCTTTGATAGTGCTTATCAGGGCTTTGCAAGTGGAAGTCTTGATACAGATGCGAAACCG 838 ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 812 TTCTTCGATAGTGCTTATCAGGGCTTTGCAAGTGGAAGTCTTGATACAGATGCGAAACCT 871 Query 839 ATTAGGATGTTTGTTGCTGATGGCGGAGAATGCCTCGTTGCTCAAAGTTATGCGAAAAAC 898 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 872 ATTAGGATGTTTGTTGCTGATGGCGGAGAATGCCTCGTTGCTCAAAGTTATGCGAAGAAC 931 Query 899 ATGGGACTCTATGGAGAACGAGTTGGAGCTCTCAGCATTGTATGCAAATCAGCAGATGTT 958 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 932 ATGGGACTCTATGGAGAACGAGTTGGAGCTCTCAGCATTGTATGCAAATCAGCAGATGTT 991 Query 959 GCGGGGAGAGTTGAAAGCCAACTGAAACTAGTGATAAGGCCAATGTACTCAAGTCCTCCA 1018 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 992 GCGGGGAGAGTTGAAAGCCAACTGAAACTAGTGATAAGGCCAATGTACTCGAGTCCTCCA 1051 Query 1019 ATTCATGGTGCATCAATTGTGGCTGTAATTCTTCGCGACAAGAATTTGTTCAACGAATGG 1078 || |||||||||||||| ||||||||||| || || |||||||||||||||||||||||| Sbjct 1052 ATCCATGGTGCATCAATCGTGGCTGTAATCCTCCGTGACAAGAATTTGTTCAACGAATGG 1111 Query 1079 ACTCTGGAACTGAAGGCCATGGCTGATCGTATCATCAGCATGAGAAAACAGCTCTTT-GA 1137 |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||| || Sbjct 1112 ACTCTGGAACTGAAGGCCATGGCTGATCGTATCATCAGCATGAGGAAACAGCT-TTTCGA 1170 Query 1138 GGCATTACGTACTCGAGGCACTCCTGGAGACTGGAGTCACATCATAAAGCAGATCGGTAT 1197 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 1171 GGCATTACGTACTCGAGGCACTCCTGGAGACTGGAGTCACATCATAAAGCAGATTGGTAT 1230 Query 1198 GTTTACATTCACAGGGTTAAACCCAGCTCAAGTCTCCTTCATGACTAAAGAGTACCACAT 1257 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1231 GTTTACCTTCACAGGGTTAAACCCAGCTCAAGTCTCCTTCATGACTAAAGAGTACCACAT 1290 Query 1258 CTACATGACATCCGATGGGAGGATAAGCATGGCTGGTCTGAGCTCGAAGACTGTACCGCA 1317 |||||||||||| || |||||||||||||||||||||||||| |||||||||||||| || Sbjct 1291 CTACATGACATCTGACGGGAGGATAAGCATGGCTGGTCTGAGTTCGAAGACTGTACCTCA 1350 Query 1318 CCTTGCAGACGCTATTCACGCTGTTGTCACCAAAGCCGTCTGAGAAACTGAACACCACCA 1377 ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| Sbjct 1351 CCTTGCAGACGCTATCCATGCTGTTGTCACCAAAGCCGTCTGAGAAACTGAACACCACCA 1410 Query 1378 TGACCACTTTGGTTAAAGCTTCATAATAAAGATTTTGTGCTTTTCTTTCTATTATAGCAT 1437 |||| || |||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 1411 TGAC-ACC------AAAGCTTCATAATAAAGATTTTGTTCTTTTCTTTCTATTATAGCAT 1463 Query 1438 TTCCGGCAGTGACAAGATAAAATGTCGTTACtattactatt 1478 ||||||||||||||||||||| |||||||||||||| |||| Sbjct 1464 TTCCGGCAGTGACAAGATAAA-TGTCGTTACTATTATTATT 1503 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 73945402785 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5